RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C LAG2Q92325 660 aa1.73□□□□□ -2.13
RPB5YBR154C MET16P18408 261 aaPredicted RBP1.72□□□□□ -2.13
RPB5YBR154C DAL82P21705 255 aa1.72□□□□□ -2.13
RPB5YBR154C RRT12P25381 491 aa1.72□□□□□ -2.13
RPB5YBR154C CSE1P33307 960 aa1.72□□□□□ -2.13
RPB5YBR154C TIP20P33891 701 aa1.72□□□□□ -2.13
RPB5YBR154C YGP1P38616 354 aaKnown RBP1.72□□□□□ -2.13
RPB5YBR154C GGC1P38988 300 aa1.72□□□□□ -2.13
RPB5YBR154C NPT1P39683 429 aaKnown RBP1.72□□□□□ -2.13
RPB5YBR154C COA1P40452 197 aa1.72□□□□□ -2.13
RPB5YBR154C UFE1P41834 346 aa1.72□□□□□ -2.13
RPB5YBR154C YJL118WP47022 219 aa1.72□□□□□ -2.13
RPB5YBR154C YNR066CP53752 436 aa1.72□□□□□ -2.13
RPB5YBR154C YNL134CP53912 376 aaKnown RBP1.72□□□□□ -2.13
RPB5YBR154C SRL4Q03085 281 aa1.72□□□□□ -2.13
RPB5YBR154C VBA1Q04301 562 aa1.72□□□□□ -2.13
RPB5YBR154C BOP2Q06150 570 aa1.72□□□□□ -2.13
RPB5YBR154C PEX30Q06169 523 aa1.72□□□□□ -2.13
RPB5YBR154C TAZ1Q06510 381 aa1.72□□□□□ -2.13
RPB5YBR154C MIM1Q08176 113 aa1.72□□□□□ -2.13
RPB5YBR154C VIK1Q12045 647 aa1.72□□□□□ -2.13
RPB5YBR154C TFC7Q12415 435 aa1.72□□□□□ -2.13
RPB5YBR154C HIS1P00498 297 aaKnown RBP1.71□□□□□ -2.14
RPB5YBR154C RAD3P06839 778 aa1.71□□□□□ -2.14
RPB5YBR154C VPS1P21576 704 aaKnown RBP1.71□□□□□ -2.14
RPB5YBR154C CWP1P28319 239 aa1.71□□□□□ -2.14
RPB5YBR154C AEP1P32493 518 aa1.71□□□□□ -2.14
RPB5YBR154C SUA5P32579 426 aa1.71□□□□□ -2.14
RPB5YBR154C MRPL6P32904 214 aa1.71□□□□□ -2.14
RPB5YBR154C SPT4P32914 102 aaPredicted RBP1.71□□□□□ -2.14
RPB5YBR154C GPX1P36014 167 aa1.71□□□□□ -2.14
RPB5YBR154C DBP7P36120 742 aaKnown RBP1.71□□□□□ -2.14
RPB5YBR154C HSM3P38348 480 aa1.71□□□□□ -2.14
RPB5YBR154C YHR045WP38775 560 aa1.71□□□□□ -2.14
RPB5YBR154C VAB2P40003 282 aa1.71□□□□□ -2.14
RPB5YBR154C DDI1P40087 428 aa1.71□□□□□ -2.14
RPB5YBR154C FMC1P40491 155 aa1.71□□□□□ -2.14
RPB5YBR154C BNA6P43619 295 aa1.71□□□□□ -2.14
RPB5YBR154C HIT1P46973 164 aa1.71□□□□□ -2.14
RPB5YBR154C TAD2P47058 250 aa1.71□□□□□ -2.14
RPB5YBR154C IBA57P47158 497 aa1.71□□□□□ -2.14
RPB5YBR154C TPN1P53099 579 aa1.71□□□□□ -2.14
RPB5YBR154C ALG11P53954 548 aaKnown RBP1.71□□□□□ -2.14
RPB5YBR154C TRM44Q02648 567 aaKnown RBP1.71□□□□□ -2.14
RPB5YBR154C API2Q04413 109 aa1.71□□□□□ -2.14
RPB5YBR154C ADH6Q04894 360 aaKnown RBP1.71□□□□□ -2.14
RPB5YBR154C TAF9Q05027 157 aa1.71□□□□□ -2.14
RPB5YBR154C DPP1Q05521 289 aa1.71□□□□□ -2.14
RPB5YBR154C YOR292CQ08743 309 aa1.71□□□□□ -2.14
RPB5YBR154C TY3A-GQ12173 290 aa1.71□□□□□ -2.14
RPB5YBR154C YDR018CQ12185 396 aa1.71□□□□□ -2.14
RPB5YBR154C RUD3Q12234 484 aaKnown RBP1.71□□□□□ -2.14
RPB5YBR154C YAL067W-AQ8TGK6 75 aa1.71□□□□□ -2.14
RPB5YBR154C TY3A-IQ99219 290 aa1.71□□□□□ -2.14
RPB5YBR154C MRP1P10662 321 aaKnown RBP1.7□□□□□ -2.14
RPB5YBR154C VPH2P32341 215 aa1.7□□□□□ -2.14
RPB5YBR154C CDC13P32797 924 aaKnown RBP1.7□□□□□ -2.14
RPB5YBR154C PRS4P38063 326 aaPredicted RBP1.7□□□□□ -2.14
RPB5YBR154C RFT1P38206 574 aaPredicted RBP1.7□□□□□ -2.14
RPB5YBR154C YBR062CP38239 180 aa1.7□□□□□ -2.14
RPB5YBR154C MNT4P53745 580 aa1.7□□□□□ -2.14
RPB5YBR154C YNL040WP53960 456 aaPredicted RBP1.7□□□□□ -2.14
RPB5YBR154C PET117Q02771 107 aa1.7□□□□□ -2.14
RPB5YBR154C OST6Q03723 332 aa1.7□□□□□ -2.14
RPB5YBR154C YML018CQ03730 393 aa1.7□□□□□ -2.14
RPB5YBR154C SEC13Q04491 297 aaKnown RBP1.7□□□□□ -2.14
RPB5YBR154C SFH1Q06168 426 aa1.7□□□□□ -2.14
RPB5YBR154C SDO1Q07953 250 aaKnown RBP1.7□□□□□ -2.14
RPB5YBR154C YOR114WQ12219 294 aa1.7□□□□□ -2.14
RPB5YBR154C ATG31Q12421 196 aa1.7□□□□□ -2.14
RPB5YBR154C RPP0P05317 312 aaKnown RBP1.69□□□□□ -2.14
RPB5YBR154C RPS3P05750 240 aaKnown RBP1.69□□□□□ -2.14
RPB5YBR154C PET494P07390 489 aaPredicted RBP1.69□□□□□ -2.14
RPB5YBR154C DAL81P21657 970 aa1.69□□□□□ -2.14
RPB5YBR154C POF1P25576 258 aa1.69□□□□□ -2.14
RPB5YBR154C ARO4P32449 370 aaKnown RBP1.69□□□□□ -2.14
RPB5YBR154C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
RPB5YBR154C MBA1P38300 278 aa1.69□□□□□ -2.14
RPB5YBR154C BIG1P38813 335 aa1.69□□□□□ -2.14
RPB5YBR154C SHC1P39000 512 aa1.69□□□□□ -2.14
RPB5YBR154C RRG9P40156 214 aa1.69□□□□□ -2.14
RPB5YBR154C GCN20P43535 752 aaKnown RBP1.69□□□□□ -2.14
RPB5YBR154C MIC19P43594 170 aa1.69□□□□□ -2.14
RPB5YBR154C ASG7P46993 209 aa1.69□□□□□ -2.14
RPB5YBR154C PEX31P53203 462 aa1.69□□□□□ -2.14
RPB5YBR154C FMP48P53233 369 aa1.69□□□□□ -2.14
RPB5YBR154C CDC14Q00684 551 aa1.69□□□□□ -2.14
RPB5YBR154C VPS60Q03390 229 aa1.69□□□□□ -2.14
RPB5YBR154C GRX3Q03835 250 aa1.69□□□□□ -2.14
RPB5YBR154C ARV1Q06541 321 aa1.69□□□□□ -2.14
RPB5YBR154C CTR3Q06686 241 aa1.69□□□□□ -2.14
RPB5YBR154C PER33Q12144 273 aa1.69□□□□□ -2.14
RPB5YBR154C SME1Q12330 94 aaPredicted RBP1.69□□□□□ -2.14
RPB5YBR154C TRM10Q12400 293 aa1.69□□□□□ -2.14
RPB5YBR154C YAL064W-BO13512 126 aa1.68□□□□□ -2.14
RPB5YBR154C YCR016WP25617 290 aaKnown RBP1.68□□□□□ -2.14
RPB5YBR154C PEX3P28795 441 aa1.68□□□□□ -2.14
RPB5YBR154C ALK2P32789 676 aaPredicted RBP1.68□□□□□ -2.14
RPB5YBR154C AIM29P36154 155 aa1.68□□□□□ -2.14
RPB5YBR154C MRX3P38172 270 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms