RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 LRFN2Q9ULH4 789 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 EIF3DO15371 548 aaKnown RBP eCLIP21.03■□□□□ 0.96
DDX39A-204ENST00000586558 SMC2O95347 1197 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 EOMESO95936 686 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 PIGRP01833 764 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 EDN1P05305 212 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 SMAD3P84022 425 aaKnown RBP21.03■□□□□ 0.96
DDX39A-204ENST00000586558 DCAF4L1Q3SXM0 396 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 UBXN11Q5T124 520 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 RSPH1Q8WYR4 309 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 ZBED2Q9BTP6 218 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 TRIM6Q9C030 488 aaPredicted RBP21.03■□□□□ 0.96
DDX39A-204ENST00000586558 EXOC7Q9UPT5 735 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 PCDHB7Q9Y5E2 793 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 PCDHB2Q9Y5E7 798 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 TRIOBPQ9H2D6 2365 aa21.03■□□□□ 0.96
DDX39A-204ENST00000586558 TTLL13PA6NNM8 815 aa21.02■□□□□ 0.96
DDX39A-204ENST00000586558 HNRNPDLO14979 420 aaKnown RBP21.02■□□□□ 0.96
DDX39A-204ENST00000586558 HOXA2O43364 376 aa21.02■□□□□ 0.96
DDX39A-204ENST00000586558 TOM1L1O75674 476 aa21.02■□□□□ 0.96
DDX39A-204ENST00000586558 RHOBTB3O94955 611 aa21.02■□□□□ 0.96
DDX39A-204ENST00000586558 KCNB1Q14721 858 aa21.02■□□□□ 0.96
DDX39A-204ENST00000586558 KMT5BQ4FZB7 885 aa21.02■□□□□ 0.96
DDX39A-204ENST00000586558 ZC2HC1CQ53FD0 456 aaPredicted RBP21.02■□□□□ 0.96
DDX39A-204ENST00000586558 L1TD1Q5T7N2 865 aaKnown RBP21.02■□□□□ 0.96
DDX39A-204ENST00000586558 ZNF598Q86UK7 904 aaKnown RBP21.02■□□□□ 0.96
DDX39A-204ENST00000586558 HACE1Q8IYU2 909 aa21.02■□□□□ 0.96
DDX39A-204ENST00000586558 PGBD4Q96DM1 585 aa21.02■□□□□ 0.96
DDX39A-204ENST00000586558 BICD1Q96G01 975 aa21.02■□□□□ 0.96
DDX39A-204ENST00000586558 ACCSQ96QU6 501 aa21.02■□□□□ 0.96
DDX39A-204ENST00000586558 TARS2Q9BW92 718 aaKnown RBP21.02■□□□□ 0.96
DDX39A-204ENST00000586558 RMND1Q9NWS8 449 aa21.02■□□□□ 0.96
DDX39A-204ENST00000586558 UBE4BO95155 1302 aa21.02■□□□□ 0.95
DDX39A-204ENST00000586558 TTC3P53804 2025 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 UPP2O95045 317 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 PROZP22891 400 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 LIG4P49917 911 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 CASP5P51878 434 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 PNOCQ13519 176 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 RAB30Q15771 203 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 FAM109BQ6ICB4 259 aaPredicted RBP21.01■□□□□ 0.95
DDX39A-204ENST00000586558 MPZL3Q6UWV2 235 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 MRPL10Q7Z7H8 261 aaKnown RBP21.01■□□□□ 0.95
DDX39A-204ENST00000586558 SPATA20Q8TB22 786 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 GSDMAQ96QA5 445 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 RAD9AQ99638 391 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 EIF2AQ9BY44 585 aaKnown RBP21.01■□□□□ 0.95
DDX39A-204ENST00000586558 GTPBP4Q9BZE4 634 aaKnown RBP21.01■□□□□ 0.95
DDX39A-204ENST00000586558 TMEM206Q9H813 350 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 PTPRHQ9HD43 1115 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 INSL6Q9Y581 213 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 PCDHA11Q9Y5I1 949 aa21.01■□□□□ 0.95
DDX39A-204ENST00000586558 TLL1O43897 1013 aa21■□□□□ 0.95
DDX39A-204ENST00000586558 NPTXRO95502 500 aa21■□□□□ 0.95
DDX39A-204ENST00000586558 MYBP10242 640 aa21■□□□□ 0.95
DDX39A-204ENST00000586558 MCF2P10911 925 aa21■□□□□ 0.95
DDX39A-204ENST00000586558 ATF7P17544 494 aaPredicted RBP21■□□□□ 0.95
DDX39A-204ENST00000586558 HTRA4P83105 476 aaPredicted RBP21■□□□□ 0.95
DDX39A-204ENST00000586558 ZNF568Q3ZCX4 644 aa21■□□□□ 0.95
DDX39A-204ENST00000586558 EEF1DP3Q658K8 133 aa21■□□□□ 0.95
DDX39A-204ENST00000586558 EPM2AIP1Q7L775 607 aaPredicted RBP21■□□□□ 0.95
DDX39A-204ENST00000586558 HPS3Q969F9 1004 aa21■□□□□ 0.95
DDX39A-204ENST00000586558 FGFBP2Q9BYJ0 223 aa21■□□□□ 0.95
DDX39A-204ENST00000586558 UBN1Q9NPG3 1134 aa21■□□□□ 0.95
DDX39A-204ENST00000586558 USP20Q9Y2K6 914 aa21■□□□□ 0.95
DDX39A-204ENST00000586558 IPPQ9Y573 584 aa21■□□□□ 0.95
DDX39A-204ENST00000586558 ZMYM2Q9UBW7 1377 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 DGKIO75912 1065 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 MBD3O95983 291 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 MCM4P33991 863 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 FAM117BQ6P1L5 589 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 TMCO2Q7Z6W1 182 aaPredicted RBP20.99■□□□□ 0.95
DDX39A-204ENST00000586558 CDR2LQ86X02 465 aaPredicted RBP20.99■□□□□ 0.95
DDX39A-204ENST00000586558 RNF169Q8NCN4 708 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 SMARCE1Q969G3 411 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 YME1L1Q96TA2 773 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 TCHPQ9BT92 498 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 CDT1Q9H211 546 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 SLC39A2Q9NP94 309 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 MSRAQ9UJ68 235 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 COL4A6Q14031 1691 aa20.99■□□□□ 0.95
DDX39A-204ENST00000586558 GRXCR1A8MXD5 290 aa20.98■□□□□ 0.95
DDX39A-204ENST00000586558 ABLIM1O14639 778 aa20.98■□□□□ 0.95
DDX39A-204ENST00000586558 CLDN3O15551 220 aa20.98■□□□□ 0.95
DDX39A-204ENST00000586558 IBSPP21815 317 aaPredicted RBP20.98■□□□□ 0.95
DDX39A-204ENST00000586558 MCL1Q07820 350 aa20.98■□□□□ 0.95
DDX39A-204ENST00000586558 NOLC1Q14978 699 aaKnown RBP eCLIP20.98■□□□□ 0.95
DDX39A-204ENST00000586558 BMT2Q1RMZ1 405 aa20.98■□□□□ 0.95
DDX39A-204ENST00000586558 SLFN12LQ6IEE8 588 aa20.98■□□□□ 0.95
DDX39A-204ENST00000586558 SYCP3Q8IZU3 236 aa20.98■□□□□ 0.95
DDX39A-204ENST00000586558 SMG8Q8ND04 991 aaKnown RBP20.98■□□□□ 0.95
DDX39A-204ENST00000586558 ZNF507Q8TCN5 953 aa20.98■□□□□ 0.95
DDX39A-204ENST00000586558 CLSTN2Q9H4D0 955 aa20.98■□□□□ 0.95
DDX39A-204ENST00000586558 RC3H2Q9HBD1 1191 aaKnown RBP20.98■□□□□ 0.95
DDX39A-204ENST00000586558 ANKFY1Q9P2R3 1169 aa20.98■□□□□ 0.95
DDX39A-204ENST00000586558 PCDHA5Q9Y5H7 936 aa20.98■□□□□ 0.95
DDX39A-204ENST00000586558 PRPF6O94906 941 aaKnown RBP20.97■□□□□ 0.95
DDX39A-204ENST00000586558 KIF20AO95235 890 aa20.97■□□□□ 0.95
DDX39A-204ENST00000586558 ITGA4P13612 1032 aa20.97■□□□□ 0.95
DDX39A-204ENST00000586558 KCNA1Q09470 495 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms