RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 GARSP41250 739 aaKnown RBP12.98□□□□□ -0.33
UBE3B-203ENST00000434735 USP11P51784 963 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 SV2CQ496J9 727 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 ZNF513Q8N8E2 541 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-203ENST00000434735 PNMA5Q96PV4 448 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 CIPCQ9C0C6 399 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 TUT1Q9H6E5 874 aaKnown RBP12.98□□□□□ -0.33
UBE3B-203ENST00000434735 VCX3AQ9NNX9 186 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 POMCP01189 267 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 NDUFA8P51970 172 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 BASP1P80723 227 aaKnown RBP12.97□□□□□ -0.33
UBE3B-203ENST00000434735 COG7P83436 770 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 MFSD10Q14728 455 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 SMAP1Q8IYB5 467 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-203ENST00000434735 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-203ENST00000434735 PITPNM2Q9BZ72 1349 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 NRXN1Q9ULB1 1477 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-203ENST00000434735 SYN1P17600 705 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 RFC5P40937 340 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 ARHGEF7Q14155 803 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 LY6KQ17RY6 165 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 TMEM35BQ8NCS4 154 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 CLMNQ96JQ2 1002 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 CKBP12277 381 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 CDH18Q13634 790 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 CFAP221Q4G0U5 840 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 SGO2Q562F6 1265 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 EFHC2Q5JST6 749 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 ADCK2Q7Z695 626 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 CCDC170Q8IYT3 715 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 GBP7Q8N8V2 638 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-203ENST00000434735 HVCN1Q96D96 273 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 TRIM62Q9BVG3 475 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 ODC1P11926 461 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 ACTR2P61160 394 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 MTMR3Q13615 1198 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.97□□□□□ -0.33
UBE3B-203ENST00000434735 RSRC1Q96IZ7 334 aaKnown RBP12.97□□□□□ -0.33
UBE3B-203ENST00000434735 EDEM3Q9BZQ6 932 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 PRMT7Q9NVM4 692 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-203ENST00000434735 PCDHB8Q9UN66 801 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 ZBED1O96006 694 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 CASP2P42575 452 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 ADKP55263 362 aaKnown RBP12.97□□□□□ -0.33
UBE3B-203ENST00000434735 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 JADE1Q6IE81 842 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 NUDCD1Q96RS6 583 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 PTPN22Q9Y2R2 807 aa12.97□□□□□ -0.33
UBE3B-203ENST00000434735 SERPIND1P05546 499 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 PDHBP11177 359 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 KLRC1P26715 233 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 SNX1Q13596 522 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 RAB42Q8N4Z0 105 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 FAM133AQ8N9E0 248 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 DCUN1D1Q96GG9 259 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 MXRA8Q9BRK3 442 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 RAB17Q9H0T7 212 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 HMGCRP04035 888 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 IRX4P78413 519 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 PTPAQ15257 358 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 KDELC2Q7Z4H8 507 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 STN1Q9H668 368 aaKnown RBP12.96□□□□□ -0.33
UBE3B-203ENST00000434735 KCNH7Q9NS40 1196 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 NEXMIFQ5QGS0 1516 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 CABYRO75952 493 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 CPP00450 1065 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 DSG3P32926 999 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 FOXD4Q12950 439 aaPredicted RBP12.96□□□□□ -0.33
UBE3B-203ENST00000434735 C3orf67Q6ZVT6 689 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 FRA10AC1Q70Z53 315 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 B4GALNT4Q76KP1 1039 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 OTOP2Q7RTS6 562 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 FAM71BQ8TC56 605 aa12.96□□□□□ -0.33
UBE3B-203ENST00000434735 LBX1P52954 281 aa12.96□□□□□ -0.34
UBE3B-203ENST00000434735 EVCP57679 992 aa12.96□□□□□ -0.34
UBE3B-203ENST00000434735 AMHR2Q16671 573 aa12.96□□□□□ -0.34
UBE3B-203ENST00000434735 PPP1R2P3Q6NXS1 205 aa12.96□□□□□ -0.34
UBE3B-203ENST00000434735 GJB4Q9NTQ9 266 aa12.96□□□□□ -0.34
UBE3B-203ENST00000434735 CASTOR2A6NHX0 329 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 H0Y626 953 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 PCK1P35558 622 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 OR8K1Q8NGG5 319 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 DACT3Q96B18 629 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-203ENST00000434735 DHTKD1Q96HY7 919 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-203ENST00000434735 ADAM22Q9P0K1 906 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 HGSO14964 777 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-203ENST00000434735 NVLO15381 856 aaKnown RBP12.95□□□□□ -0.34
UBE3B-203ENST00000434735 SLC39A14Q15043 492 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 PALB2Q86YC2 1186 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 ATXN3LQ9H3M9 355 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 NDFIP2Q9NV92 336 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 KIAA1468Q9P260 1216 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 HEY1Q9Y5J3 304 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 A6NNZ2 444 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 MAFGO15525 162 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 RGS7P49802 495 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 TUBB8Q3ZCM7 444 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 MAP3K21Q5TCX8 1036 aa12.95□□□□□ -0.34
UBE3B-203ENST00000434735 SKA1Q96BD8 255 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms