RNA–Protein interactions for RNA: snR3

snR3, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR3, Length 194 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR3	snR3	DSE3	Q08729	430 aa		4.26	□□□□□ -1.73
snR3	snR3	THP3	Q12049	470 aa	Known RBP	4.26	□□□□□ -1.73
snR3	snR3	FRE8	Q12209	686 aa		4.26	□□□□□ -1.73
snR3	snR3	AYT1	Q12226	474 aa		4.26	□□□□□ -1.73
snR3	snR3	HMS1	Q12398	434 aa		4.26	□□□□□ -1.73
snR3	snR3	CBS2	P14905	389 aa		4.25	□□□□□ -1.73
snR3	snR3	IFM1	P25038	676 aa		4.25	□□□□□ -1.73
snR3	snR3	CPR3	P25719	182 aa		4.25	□□□□□ -1.73
snR3	snR3	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
snR3	snR3	FUN26	P31381	517 aa		4.25	□□□□□ -1.73
snR3	snR3	TPS2	P31688	896 aa	Known RBP	4.25	□□□□□ -1.73
snR3	snR3	SSO1	P32867	290 aa		4.25	□□□□□ -1.73
snR3	snR3	SPT4	P32914	102 aa	Predicted RBP	4.25	□□□□□ -1.73
snR3	snR3	YKL187C	P34231	750 aa		4.25	□□□□□ -1.73
snR3	snR3	YPC1	P38298	316 aa		4.25	□□□□□ -1.73
snR3	snR3	CUE1	P38428	203 aa		4.25	□□□□□ -1.73
snR3	snR3	URA8	P38627	578 aa	Predicted RBP	4.25	□□□□□ -1.73
snR3	snR3	SEC72	P39742	193 aa	Known RBP	4.25	□□□□□ -1.73
snR3	snR3	YNL194C	P40169	301 aa		4.25	□□□□□ -1.73
snR3	snR3	PRE6	P40303	254 aa	Known RBP	4.25	□□□□□ -1.73
snR3	snR3	DSN1	P40568	576 aa		4.25	□□□□□ -1.73
snR3	snR3	HAC1	P41546	238 aa		4.25	□□□□□ -1.73
snR3	snR3	CWC23	P52868	283 aa	Predicted RBP	4.25	□□□□□ -1.73
snR3	snR3	NBP1	P52919	319 aa	Predicted RBP	4.25	□□□□□ -1.73
snR3	snR3	VHT1	P53241	593 aa		4.25	□□□□□ -1.73
snR3	snR3	MTQ1	P53944	314 aa		4.25	□□□□□ -1.73
snR3	snR3	TDA1	Q03533	586 aa		4.25	□□□□□ -1.73
snR3	snR3	CDC123	Q05791	360 aa		4.25	□□□□□ -1.73
snR3	snR3	YLR446W	Q06204	433 aa		4.25	□□□□□ -1.73
snR3	snR3	SLM3	Q12093	417 aa		4.25	□□□□□ -1.73
snR3	snR3	TMS1	Q12116	473 aa		4.25	□□□□□ -1.73
snR3	snR3	YGK3	Q12222	375 aa	Predicted RBP	4.25	□□□□□ -1.73
snR3	snR3	SNU23	Q12368	194 aa	Predicted RBP	4.25	□□□□□ -1.73
snR3	snR3	HTB1	P02293	131 aa	Known RBP	4.24	□□□□□ -1.73
snR3	snR3	HTB2	P02294	131 aa		4.24	□□□□□ -1.73
snR3	snR3	NAM2	P11325	894 aa		4.24	□□□□□ -1.73
snR3	snR3	YER184C	P39961	794 aa		4.24	□□□□□ -1.73
snR3	snR3	YAT2	P40017	923 aa		4.24	□□□□□ -1.73
snR3	snR3	UTP18	P40362	594 aa	Predicted RBP	4.24	□□□□□ -1.73
snR3	snR3	SCS3	P53012	380 aa		4.24	□□□□□ -1.73
snR3	snR3	USE1	P53146	245 aa		4.24	□□□□□ -1.73
snR3	snR3	CDH1	P53197	566 aa		4.24	□□□□□ -1.73
snR3	snR3	MAL13	P53338	473 aa		4.24	□□□□□ -1.73
snR3	snR3	YNL095C	P53932	642 aa		4.24	□□□□□ -1.73
snR3	snR3	DIA1	P54005	336 aa		4.24	□□□□□ -1.73
snR3	snR3	CDC14	Q00684	551 aa		4.24	□□□□□ -1.73
snR3	snR3	FMP42	Q04991	504 aa		4.24	□□□□□ -1.73
snR3	snR3	TAF9	Q05027	157 aa		4.24	□□□□□ -1.73
snR3	snR3	FUS2	Q05670	677 aa		4.24	□□□□□ -1.73
snR3	snR3	RSA1	Q08932	381 aa		4.24	□□□□□ -1.73
snR3	snR3	YCT1	Q12235	531 aa		4.24	□□□□□ -1.73
snR3	snR3	MRS3	P10566	314 aa		4.23	□□□□□ -1.73
snR3	snR3	SPS100	P13130	326 aa		4.23	□□□□□ -1.73
snR3	snR3	CPR1	P14832	162 aa	Known RBP	4.23	□□□□□ -1.73
snR3	snR3	CMK2	P22517	447 aa		4.23	□□□□□ -1.73
snR3	snR3	RNA14	P25298	677 aa	Known RBP	4.23	□□□□□ -1.73
snR3	snR3	HOM6	P31116	359 aa	Known RBP	4.23	□□□□□ -1.73
snR3	snR3	QRI5	P32344	111 aa		4.23	□□□□□ -1.73
snR3	snR3	NDT80	P38830	627 aa		4.23	□□□□□ -1.73
snR3	snR3	SMB1	P40018	196 aa	Known RBP	4.23	□□□□□ -1.73
snR3	snR3	RPR2	P40571	144 aa		4.23	□□□□□ -1.73
snR3	snR3	YFL067W	P43537	175 aa		4.23	□□□□□ -1.73
snR3	snR3	MOB2	P43563	287 aa		4.23	□□□□□ -1.73
snR3	snR3	NCA3	P46955	337 aa		4.23	□□□□□ -1.73
snR3	snR3	YJR079W	P47126	109 aa		4.23	□□□□□ -1.73
snR3	snR3	PEX31	P53203	462 aa		4.23	□□□□□ -1.73
snR3	snR3	MTM1	P53320	366 aa		4.23	□□□□□ -1.73
snR3	snR3	ASI3	P53983	676 aa		4.23	□□□□□ -1.73
snR3	snR3	SUR7	P54003	302 aa		4.23	□□□□□ -1.73
snR3	snR3	EBS1	Q03466	884 aa	Known RBP	4.23	□□□□□ -1.73
snR3	snR3	SEC13	Q04491	297 aa	Known RBP	4.23	□□□□□ -1.73
snR3	snR3	GAS2	Q06135	555 aa		4.23	□□□□□ -1.73
snR3	snR3	TAZ1	Q06510	381 aa		4.23	□□□□□ -1.73
snR3	snR3	PLB3	Q08108	686 aa		4.23	□□□□□ -1.73
snR3	snR3	YDL199C	Q12407	687 aa		4.23	□□□□□ -1.73
snR3	snR3	RPL15A	P05748	204 aa	Known RBP	4.22	□□□□□ -1.73
snR3	snR3	MIR1	P23641	311 aa	Known RBP	4.22	□□□□□ -1.73
snR3	snR3	CHA1	P25379	360 aa	Known RBP	4.22	□□□□□ -1.73
snR3	snR3	ADE1	P27616	306 aa		4.22	□□□□□ -1.73
snR3	snR3	LSM12	P38828	187 aa	Known RBP	4.22	□□□□□ -1.73
snR3	snR3	FRT2	P39734	528 aa		4.22	□□□□□ -1.73
snR3	snR3	IBA57	P47158	497 aa		4.22	□□□□□ -1.73
snR3	snR3	MIC26	P50087	233 aa		4.22	□□□□□ -1.73
snR3	snR3	CLD1	P53264	445 aa		4.22	□□□□□ -1.73
snR3	snR3	GMC1	Q04399	608 aa		4.22	□□□□□ -1.73
snR3	snR3	FAR8	Q05040	523 aa		4.22	□□□□□ -1.73
snR3	snR3	DPP1	Q05521	289 aa		4.22	□□□□□ -1.73
snR3	snR3	PEX30	Q06169	523 aa		4.22	□□□□□ -1.73
snR3	snR3	TAF10	Q12030	206 aa		4.22	□□□□□ -1.73
snR3	snR3	RPS3	P05750	240 aa	Known RBP	4.21	□□□□□ -1.74
snR3	snR3	TAF14	P35189	244 aa		4.21	□□□□□ -1.74
snR3	snR3	BMT2	P38278	337 aa		4.21	□□□□□ -1.74
snR3	snR3	FZO1	P38297	855 aa		4.21	□□□□□ -1.74
snR3	snR3	TRM5	P38793	499 aa		4.21	□□□□□ -1.74
snR3	snR3	SUR2	P38992	349 aa		4.21	□□□□□ -1.74
snR3	snR3	RPH1	P39956	796 aa		4.21	□□□□□ -1.74
snR3	snR3	YIL152W	P40455	235 aa		4.21	□□□□□ -1.74
snR3	snR3	PCI8	P40512	444 aa		4.21	□□□□□ -1.74
snR3	snR3	JHD2	P47156	728 aa	Predicted RBP	4.21	□□□□□ -1.74
snR3	snR3	YNL040W	P53960	456 aa	Predicted RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms