RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI3	YPR189W	MATALPHA2	P0CY08	210 aa		1.44	□□□□□ -2.18
SKI3	YPR189W	HMLALPHA2	P0CY09	210 aa		1.44	□□□□□ -2.18
SKI3	YPR189W	ARF2	P19146	181 aa	Known RBP	1.44	□□□□□ -2.18
SKI3	YPR189W	RPL24B	P24000	155 aa	Known RBP	1.44	□□□□□ -2.18
SKI3	YPR189W	PRP18	P33411	251 aa	Predicted RBP	1.44	□□□□□ -2.18
SKI3	YPR189W	CBT1	P36038	271 aa	Predicted RBP	1.44	□□□□□ -2.18
SKI3	YPR189W	RTT101	P47050	842 aa		1.44	□□□□□ -2.18
SKI3	YPR189W	MTQ1	P53944	314 aa		1.44	□□□□□ -2.18
SKI3	YPR189W	ALG11	P53954	548 aa	Known RBP	1.44	□□□□□ -2.18
SKI3	YPR189W	ADH6	Q04894	360 aa	Known RBP	1.44	□□□□□ -2.18
SKI3	YPR189W	CDC123	Q05791	360 aa		1.44	□□□□□ -2.18
SKI3	YPR189W	NDE2	Q07500	545 aa		1.44	□□□□□ -2.18
SKI3	YPR189W	SRO7	Q12038	1033 aa		1.44	□□□□□ -2.18
SKI3	YPR189W	BSC1	Q12140	328 aa		1.44	□□□□□ -2.18
SKI3	YPR189W	DET1	Q99288	334 aa	Known RBP	1.44	□□□□□ -2.18
SKI3	YPR189W	TIP1	P27654	210 aa	Predicted RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	MKK1	P32490	508 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	PAC2	P39937	518 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	ERG10	P41338	398 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	NCA3	P46955	337 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	GWT1	P47026	490 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	RPC17	P47076	161 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	COS1	P53822	381 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	CDC14	Q00684	551 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	SED5	Q01590	340 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	PIR3	Q03180	325 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	OST6	Q03723	332 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	CSM3	Q04659	317 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	YDR222W	Q04925	415 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	GAT3	Q07928	141 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	YOR387C	Q08910	206 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	YRA1	Q12159	226 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	RRP42	Q12277	265 aa	Predicted RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	CRC1	Q12289	327 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	SNF8	Q12483	233 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	IZH4	Q99393	312 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	ILV1	P00927	576 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	1.43	□□□□□ -2.18	not detected
SKI3	YPR189W	SSC1	P0CS90	654 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	NAM2	P11325	894 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	AMD1	P15274	810 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	VMA6	P32366	345 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	LOS1	P33418	1100 aa	Predicted RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	GPX2	P38143	162 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	MOH1	P38191	138 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	MIC12	P38341	106 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	URA8	P38627	578 aa	Predicted RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	SMF2	P38778	549 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	ERG28	P40030	148 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	SFH5	P47008	294 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	TIS11	P47977	285 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	CAF40	P53829	373 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	DIA1	P54005	336 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	KRE28	Q04431	385 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	CDD1	Q06549	142 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	APC9	Q12107	265 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	HMS1	Q12398	434 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	EAF3	Q12432	401 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	YCL012C	Q8J0M4	134 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	SAL1	D6W196	494 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	HIS1	P00498	297 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	PGK1	P00560	416 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	TCP1	P12612	559 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	DCC1	P25559	380 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	ERG9	P29704	444 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	ACB1	P31787	87 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	MUD1	P32605	298 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	TAF14	P35189	244 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	RIB5	P38145	238 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	SHE3	P38272	425 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	DHH1	P39517	506 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	YIL029C	P40538	142 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	YIL024C	P40543	189 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	YFL067W	P43537	175 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	KEG1	P43614	200 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	AVT4	P50944	713 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	YNR048W	P53740	393 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	IDP3	P53982	420 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	SKI8	Q02793	397 aa	Predicted RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	VBA1	Q04301	562 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	THI20	Q08224	551 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	GRE1	Q08969	168 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	TMS1	Q12116	473 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	NCB2	Q92317	146 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	SEY1	Q99287	776 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	AI5_BETA	Q9ZZX0	354 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	CAP2	P13517	287 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	ERD1	P16151	362 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	HEM15	P16622	393 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	CBF1	P17106	351 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	EXG1	P23776	448 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	ATP7	P30902	174 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	GLC7	P32598	312 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	YEF1	P32622	495 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	MRPL6	P32904	214 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	MCR1	P36060	302 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	RCK2	P38623	610 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	ALG8	P40351	577 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	WWM1	P43582	211 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	HOC1	P47124	396 aa		1.43	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 113.7 ms