RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W ABZ2Q03266 374 aa9.2□□□□□ -0.94
PRE6YOL038W BNA7Q04066 261 aa9.2□□□□□ -0.94
PRE6YOL038W YMR226CQ05016 267 aaKnown RBP9.2□□□□□ -0.94
PRE6YOL038W IPK1Q06667 281 aa9.2□□□□□ -0.94
PRE6YOL038W UIP4Q08926 304 aa9.2□□□□□ -0.94
PRE6YOL038W RPL35AP0CX84 120 aaKnown RBP9.19□□□□□ -0.94
PRE6YOL038W RPL35BP0CX85 120 aaKnown RBP9.19□□□□□ -0.94
PRE6YOL038W PUB1P32588 453 aaKnown RBP RIP-Chip data9.19□□□□□ -0.94not detected
PRE6YOL038W PIG2P40187 538 aa9.19□□□□□ -0.94
PRE6YOL038W AGP3P43548 558 aa9.19□□□□□ -0.94
PRE6YOL038W FAR7P43592 221 aa9.19□□□□□ -0.94
PRE6YOL038W PEF1P53238 335 aa9.19□□□□□ -0.94
PRE6YOL038W YDR239CQ03780 787 aa9.19□□□□□ -0.94
PRE6YOL038W ELP6Q04868 273 aa9.19□□□□□ -0.94
PRE6YOL038W TAF3Q12297 353 aa9.19□□□□□ -0.94
PRE6YOL038W GEP5Q12393 293 aa9.19□□□□□ -0.94
PRE6YOL038W IZH2Q12442 317 aa9.19□□□□□ -0.94
PRE6YOL038W SPO7P18410 259 aa9.18□□□□□ -0.94
PRE6YOL038W YCL002CP25565 263 aa9.18□□□□□ -0.94
PRE6YOL038W APE2P32454 952 aaKnown RBP9.18□□□□□ -0.94
PRE6YOL038W SPT10P35208 640 aa9.18□□□□□ -0.94
PRE6YOL038W SLM4P38247 162 aa9.18□□□□□ -0.94
PRE6YOL038W ECM1P39715 212 aa9.18□□□□□ -0.94
PRE6YOL038W YGL101WP53144 215 aa9.18□□□□□ -0.94
PRE6YOL038W MOT3P54785 490 aaKnown RBP9.18□□□□□ -0.94
PRE6YOL038W RVB1Q03940 463 aaKnown RBP9.18□□□□□ -0.94
PRE6YOL038W RRP9Q06506 573 aaKnown RBP9.18□□□□□ -0.94
PRE6YOL038W TY1A-BLQ12266 440 aa9.18□□□□□ -0.94
PRE6YOL038W MCT1Q12283 360 aa9.18□□□□□ -0.94
PRE6YOL038W NFT1P0CE68 1218 aa9.17□□□□□ -0.94
PRE6YOL038W CNA1P23287 553 aa9.17□□□□□ -0.94
PRE6YOL038W POL4P25615 582 aa9.17□□□□□ -0.94
PRE6YOL038W PUP2P32379 260 aa9.17□□□□□ -0.94
PRE6YOL038W MRPL6P32904 214 aa9.17□□□□□ -0.94
PRE6YOL038W BUR6P40096 142 aa9.17□□□□□ -0.94
PRE6YOL038W SNL1P40548 159 aa9.17□□□□□ -0.94
PRE6YOL038W GDS1P41913 522 aa9.17□□□□□ -0.94
PRE6YOL038W PFS2P42841 465 aaKnown RBP9.17□□□□□ -0.94
PRE6YOL038W CHA4P43634 648 aa9.17□□□□□ -0.94
PRE6YOL038W RMD9P53140 646 aaKnown RBP9.17□□□□□ -0.94
PRE6YOL038W APM1Q00776 475 aaPredicted RBP9.17□□□□□ -0.94
PRE6YOL038W YPL077CQ02831 240 aa9.17□□□□□ -0.94
PRE6YOL038W TAZ1Q06510 381 aa9.17□□□□□ -0.94
PRE6YOL038W ERG4P25340 473 aa9.16□□□□□ -0.94
PRE6YOL038W SIC1P38634 284 aa9.16□□□□□ -0.94
PRE6YOL038W SBE22P38814 852 aa9.16□□□□□ -0.94
PRE6YOL038W YAR028WP39548 234 aa9.16□□□□□ -0.94
PRE6YOL038W QDR1P40475 563 aa9.16□□□□□ -0.94
PRE6YOL038W MDE1P47095 244 aa9.16□□□□□ -0.94
PRE6YOL038W ASI3P53983 676 aa9.16□□□□□ -0.94
PRE6YOL038W CIK1Q01649 594 aa9.16□□□□□ -0.94
PRE6YOL038W NUP49Q02199 472 aa9.16□□□□□ -0.94
PRE6YOL038W YMR279CQ03263 540 aa9.16□□□□□ -0.94
PRE6YOL038W OST6Q03723 332 aa9.16□□□□□ -0.94
PRE6YOL038W MCH4Q08268 501 aa9.16□□□□□ -0.94
PRE6YOL038W ATR1P13090 542 aa9.15□□□□□ -0.94
PRE6YOL038W BUD5P25300 642 aaPredicted RBP9.15□□□□□ -0.94
PRE6YOL038W RPC82P32349 654 aa9.15□□□□□ -0.94
PRE6YOL038W CLB6P32943 380 aa9.15□□□□□ -0.94
PRE6YOL038W YKL107WP34251 309 aa9.15□□□□□ -0.94
PRE6YOL038W RPS20P38701 121 aaKnown RBP9.15□□□□□ -0.94
PRE6YOL038W MLH1P38920 769 aa9.15□□□□□ -0.94
PRE6YOL038W EGT2P42835 1041 aa9.15□□□□□ -0.94
PRE6YOL038W IDS2P46958 469 aa9.15□□□□□ -0.94
PRE6YOL038W SSY5P47002 699 aa9.15□□□□□ -0.94
PRE6YOL038W UBC13P52490 153 aa9.15□□□□□ -0.94
PRE6YOL038W NUP116Q02630 1113 aa9.15□□□□□ -0.94
PRE6YOL038W SNA4Q07549 140 aa9.15□□□□□ -0.94
PRE6YOL038W LOT6Q07923 191 aa9.15□□□□□ -0.94
PRE6YOL038W MEU1Q07938 337 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94not detected
PRE6YOL038W THI72Q08579 599 aa9.15□□□□□ -0.94
PRE6YOL038W YOR238WQ08634 303 aa9.15□□□□□ -0.94
PRE6YOL038W PEP12P32854 288 aa9.14□□□□□ -0.95
PRE6YOL038W CHL4P38907 458 aa9.14□□□□□ -0.95
PRE6YOL038W NCA3P46955 337 aa9.14□□□□□ -0.95
PRE6YOL038W EXG2P52911 562 aa9.14□□□□□ -0.95
PRE6YOL038W YIP5P53108 310 aa9.14□□□□□ -0.95
PRE6YOL038W PGA1P53896 198 aa9.14□□□□□ -0.95
PRE6YOL038W YDR387CQ04162 555 aa9.14□□□□□ -0.95
PRE6YOL038W SRL2Q12020 392 aa9.14□□□□□ -0.95
PRE6YOL038W STE50P25344 346 aa9.13□□□□□ -0.95
PRE6YOL038W YIR020CP40575 100 aa9.13□□□□□ -0.95
PRE6YOL038W PET191Q02772 108 aa9.13□□□□□ -0.95
PRE6YOL038W YPR097WQ06839 1073 aa9.13□□□□□ -0.95
PRE6YOL038W YDL114WQ07530 308 aa9.13□□□□□ -0.95
PRE6YOL038W YOR289WQ12012 251 aaPredicted RBP9.13□□□□□ -0.95
PRE6YOL038W RTR2Q12378 196 aa9.13□□□□□ -0.95
PRE6YOL038W STE18P18852 110 aa9.12□□□□□ -0.95
PRE6YOL038W MNS1P32906 549 aa9.12□□□□□ -0.95
PRE6YOL038W SHM2P37291 469 aaKnown RBP9.12□□□□□ -0.95
PRE6YOL038W AMN1P38285 549 aaPredicted RBP9.12□□□□□ -0.95
PRE6YOL038W MED8P38304 223 aa9.12□□□□□ -0.95
PRE6YOL038W YER184CP39961 794 aa9.12□□□□□ -0.95
PRE6YOL038W RRG9P40156 214 aa9.12□□□□□ -0.95
PRE6YOL038W TFB3Q03290 321 aa9.12□□□□□ -0.95
PRE6YOL038W SSK1Q07084 712 aa9.12□□□□□ -0.95
PRE6YOL038W FAR1P21268 830 aa9.11□□□□□ -0.95
PRE6YOL038W BOS1P25385 244 aa9.11□□□□□ -0.95
PRE6YOL038W SSE2P32590 693 aaKnown RBP9.11□□□□□ -0.95
PRE6YOL038W GLC7P32598 312 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 6 ms