RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	YFL066C	P43538	392 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	YJL055W	P47044	245 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	MDE1	P47095	244 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	YNL033W	P53964	284 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	YNL019C	P53975	284 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	TPS1	Q00764	495 aa	Known RBP	4.15	□□□□□ -1.75
ATM1	YMR301C	RRN5	Q02983	363 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	RSA1	Q08932	381 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	YDL180W	Q12301	547 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	YIL002W-A	Q3E7Z5	69 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	SUI3	P09064	285 aa	Known RBP	4.14	□□□□□ -1.75
ATM1	YMR301C	PRP4	P20053	465 aa	Known RBP	4.14	□□□□□ -1.75
ATM1	YMR301C	GSH1	P32477	678 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	SSE1	P32589	693 aa	Known RBP	4.14	□□□□□ -1.75
ATM1	YMR301C	MDL1	P33310	695 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
ATM1	YMR301C	SNM1	P40993	198 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	IDP2	P41939	412 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	SNF12	P53628	566 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	GIM3	P53900	129 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	KAP120	Q02932	1032 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	ARO10	Q06408	635 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	VPS36	Q06696	566 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	NOP12	Q08208	459 aa	Known RBP	4.14	□□□□□ -1.75
ATM1	YMR301C	MUM3	Q08750	479 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	GRE1	Q08969	168 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	YDL199C	Q12407	687 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	PFK27	Q12471	397 aa	Predicted RBP	4.14	□□□□□ -1.75
ATM1	YMR301C	Q0297	Q9ZZV8	51 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	YLR302C	O13544	120 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	RHO1	P06780	209 aa	Known RBP	4.14	□□□□□ -1.75
ATM1	YMR301C	HSP30	P25619	332 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	GDH2	P33327	1092 aa	Known RBP	4.14	□□□□□ -1.75
ATM1	YMR301C	ECM1	P39715	212 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	MRX1	P40050	688 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	ADO1	P47143	340 aa	Known RBP	4.14	□□□□□ -1.75
ATM1	YMR301C	TOM22	P49334	152 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	PCP1	P53259	346 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	MRP51	Q02950	344 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	NNT1	Q05874	261 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	UTP21	Q06078	939 aa	Predicted RBP	4.14	□□□□□ -1.75
ATM1	YMR301C	MCM21	Q06675	368 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	RRT8	Q08219	342 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	TMC1	Q08422	150 aa	Predicted RBP	4.14	□□□□□ -1.75
ATM1	YMR301C	WTM1	Q12363	437 aa	Known RBP	4.14	□□□□□ -1.75
ATM1	YMR301C	SET6	Q12529	373 aa		4.14	□□□□□ -1.75
ATM1	YMR301C	URA3	P03962	267 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	YPK2	P18961	677 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	OLE1	P21147	510 aa	Known RBP	4.13	□□□□□ -1.75
ATM1	YMR301C	SED4	P25365	1065 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	ITR1	P30605	584 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	ATP7	P30902	174 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	TIM12	P32830	109 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	SOF1	P33750	489 aa	Known RBP	4.13	□□□□□ -1.75
ATM1	YMR301C	YKL187C	P34231	750 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	SWH1	P35845	1188 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	PTC7	P38797	343 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	SKN7	P38889	622 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	COG3	P40094	801 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	NUP57	P48837	541 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	MPC1	P53157	130 aa	Known RBP	4.13	□□□□□ -1.75
ATM1	YMR301C	COX18	P53239	316 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	ARG5,6	Q01217	863 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	HOT1	Q03213	719 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	RNH202	Q05635	350 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	PHO92	Q06390	306 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	IRC19	Q07843	230 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	CRT10	Q08226	957 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	THP1	Q08231	455 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	MED2	Q12124	431 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	SFM1	Q12314	213 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	YOR343C	Q12484	108 aa		4.13	□□□□□ -1.75
ATM1	YMR301C	RAD7	P06779	565 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	SEN2	P16658	377 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	RPB8	P20436	146 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	PRP28	P23394	588 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	PEX3	P28795	441 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	ARP2	P32381	391 aa	Known RBP	4.12	□□□□□ -1.75
ATM1	YMR301C	PPQ1	P32945	549 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	MTH1	P35198	433 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	AIM3	P38266	947 aa	Known RBP	4.12	□□□□□ -1.75
ATM1	YMR301C	MPM1	P40364	252 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	BUD8	P41698	603 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	SPO19	Q03029	223 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	SCS7	Q03529	384 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	MRPL1	Q04599	285 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	GPI11	Q06636	219 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	SNX3	Q08826	162 aa	Known RBP	4.12	□□□□□ -1.75
ATM1	YMR301C	RLM1	Q12224	676 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	BLM10	P43583	2143 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	YOL163W	P0CF20	169 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	SEC12	P11655	471 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	PET9	P18239	318 aa	Known RBP	4.12	□□□□□ -1.75
ATM1	YMR301C	YCR100C	P25606	316 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	ITR2	P30606	609 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	MRPS5	P33759	307 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	NUF2	P33895	451 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	CHK1	P38147	527 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	PRS3	P38689	320 aa	Known RBP	4.12	□□□□□ -1.75
ATM1	YMR301C	PEX7	P39108	375 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms