RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	RBL2	P48606	106 aa	Known RBP	13.8	□□□□□ -0.2
CCC1	YLR220W	AGE1	Q04412	482 aa		13.8	□□□□□ -0.2
CCC1	YLR220W	FMP45	Q07651	309 aa		13.8	□□□□□ -0.2
CCC1	YLR220W	OPI3	P05375	206 aa		13.79	□□□□□ -0.2
CCC1	YLR220W	PHO2	P07269	559 aa		13.79	□□□□□ -0.2
CCC1	YLR220W	PPA2	P28239	310 aa		13.79	□□□□□ -0.2
CCC1	YLR220W	RIX1	P38883	763 aa	Predicted RBP	13.79	□□□□□ -0.2
CCC1	YLR220W	BSC5	P53755	489 aa		13.79	□□□□□ -0.2
CCC1	YLR220W	NOG1	Q02892	647 aa	Known RBP	13.79	□□□□□ -0.2
CCC1	YLR220W	RSM24	Q03976	319 aa		13.79	□□□□□ -0.2
CCC1	YLR220W	RRP9	Q06506	573 aa	Known RBP	13.79	□□□□□ -0.2
CCC1	YLR220W	RBD2	Q12270	262 aa		13.79	□□□□□ -0.2
CCC1	YLR220W	PHO90	P39535	881 aa		13.78	□□□□□ -0.2
CCC1	YLR220W	IRC5	P43610	853 aa		13.78	□□□□□ -0.2
CCC1	YLR220W	RRP17	Q04031	235 aa	Predicted RBP	13.78	□□□□□ -0.2
CCC1	YLR220W	BNA7	Q04066	261 aa		13.78	□□□□□ -0.2
CCC1	YLR220W	HMS1	Q12398	434 aa		13.78	□□□□□ -0.2
CCC1	YLR220W	YHR214C-E	Q8TGK0	99 aa		13.78	□□□□□ -0.2
CCC1	YLR220W	TAL1	P15019	335 aa	Known RBP	13.77	□□□□□ -0.21
CCC1	YLR220W	STE50	P25344	346 aa		13.77	□□□□□ -0.21
CCC1	YLR220W	EFM3	P47163	339 aa		13.77	□□□□□ -0.21
CCC1	YLR220W	YLR352W	Q06479	807 aa		13.77	□□□□□ -0.21
CCC1	YLR220W	RKM1	Q08961	583 aa	Predicted RBP	13.77	□□□□□ -0.21
CCC1	YLR220W	YGL041W-A	P0C5N3	154 aa		13.76	□□□□□ -0.21
CCC1	YLR220W	MTC2	P34246	357 aa		13.76	□□□□□ -0.21
CCC1	YLR220W	PFS2	P42841	465 aa	Known RBP	13.76	□□□□□ -0.21
CCC1	YLR220W	PRP3	Q03338	469 aa	Predicted RBP	13.76	□□□□□ -0.21
CCC1	YLR220W	GRX3	Q03835	250 aa		13.76	□□□□□ -0.21
CCC1	YLR220W	MRX10	Q05648	414 aa		13.76	□□□□□ -0.21
CCC1	YLR220W	YDL114W	Q07530	308 aa		13.76	□□□□□ -0.21
CCC1	YLR220W	YOR238W	Q08634	303 aa		13.76	□□□□□ -0.21
CCC1	YLR220W	MEC1	P38111	2368 aa		13.76	□□□□□ -0.21
CCC1	YLR220W	TRA1	P38811	3744 aa		13.76	□□□□□ -0.21
CCC1	YLR220W	SOF1	P33750	489 aa	Known RBP	13.75	□□□□□ -0.21
CCC1	YLR220W	DTR1	P38125	572 aa		13.75	□□□□□ -0.21
CCC1	YLR220W	YMR262W	P38430	313 aa		13.75	□□□□□ -0.21
CCC1	YLR220W	NVJ1	P38881	321 aa		13.75	□□□□□ -0.21
CCC1	YLR220W	LYS5	P50113	272 aa		13.75	□□□□□ -0.21
CCC1	YLR220W	YNR040W	P53736	256 aa		13.75	□□□□□ -0.21
CCC1	YLR220W	GAL83	Q04739	417 aa		13.75	□□□□□ -0.21
CCC1	YLR220W	AIM6	Q07716	390 aa		13.75	□□□□□ -0.21
CCC1	YLR220W	YOL114C	Q12322	202 aa		13.75	□□□□□ -0.21
CCC1	YLR220W	NFT1	P0CE68	1218 aa		13.74	□□□□□ -0.21
CCC1	YLR220W	PTC6	P25646	442 aa		13.74	□□□□□ -0.21
CCC1	YLR220W	FMP23	P38231	175 aa		13.74	□□□□□ -0.21
CCC1	YLR220W	MRPL19	P53875	158 aa		13.74	□□□□□ -0.21
CCC1	YLR220W	MAK3	Q03503	176 aa		13.74	□□□□□ -0.21
CCC1	YLR220W	FMP42	Q04991	504 aa		13.74	□□□□□ -0.21
CCC1	YLR220W	IPK1	Q06667	281 aa		13.74	□□□□□ -0.21
CCC1	YLR220W	MCH4	Q08268	501 aa		13.74	□□□□□ -0.21
CCC1	YLR220W	FRE5	Q08908	694 aa		13.74	□□□□□ -0.21
CCC1	YLR220W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	13.73	□□□□□ -0.21	RIP-Chip
CCC1	YLR220W	GPI16	P38875	610 aa		13.73	□□□□□ -0.21
CCC1	YLR220W	PCL6	P40038	420 aa		13.73	□□□□□ -0.21
CCC1	YLR220W	YIL165C	P40446	119 aa		13.73	□□□□□ -0.21
CCC1	YLR220W	SCW11	P53189	542 aa		13.73	□□□□□ -0.21
CCC1	YLR220W	PCP1	P53259	346 aa		13.73	□□□□□ -0.21
CCC1	YLR220W	VOA1	P53262	265 aa		13.73	□□□□□ -0.21
CCC1	YLR220W	KAP120	Q02932	1032 aa		13.73	□□□□□ -0.21
CCC1	YLR220W	PLB2	Q03674	706 aa		13.73	□□□□□ -0.21
CCC1	YLR220W	BLM10	P43583	2143 aa		13.73	□□□□□ -0.21
CCC1	YLR220W	PDE2	P06776	526 aa		13.72	□□□□□ -0.21
CCC1	YLR220W	RPA135	P22138	1203 aa	Known RBP	13.72	□□□□□ -0.21
CCC1	YLR220W	MRPL39	P36533	70 aa		13.72	□□□□□ -0.21
CCC1	YLR220W	THI2	P38141	450 aa		13.72	□□□□□ -0.21
CCC1	YLR220W	CHS7	P38843	316 aa		13.72	□□□□□ -0.21
CCC1	YLR220W	XBP1	P40489	647 aa		13.72	□□□□□ -0.21
CCC1	YLR220W	HSV2	P50079	448 aa	Predicted RBP	13.72	□□□□□ -0.21
CCC1	YLR220W	PPT1	P53043	513 aa		13.72	□□□□□ -0.21
CCC1	YLR220W	CTS2	Q06350	511 aa		13.72	□□□□□ -0.21
CCC1	YLR220W	FRE6	Q12473	712 aa		13.72	□□□□□ -0.21
CCC1	YLR220W	RPS13	P05756	151 aa	Known RBP	13.71	□□□□□ -0.21
CCC1	YLR220W	KIN28	P06242	306 aa		13.71	□□□□□ -0.21
CCC1	YLR220W	HMG1	P12683	1054 aa		13.71	□□□□□ -0.21
CCC1	YLR220W	SPO7	P18410	259 aa		13.71	□□□□□ -0.21
CCC1	YLR220W	PRE7	P23724	241 aa	Known RBP	13.71	□□□□□ -0.21
CCC1	YLR220W	SRP102	P36057	244 aa	Predicted RBP	13.71	□□□□□ -0.21
CCC1	YLR220W	SDP1	P40479	209 aa		13.71	□□□□□ -0.21
CCC1	YLR220W	FMC1	P40491	155 aa		13.71	□□□□□ -0.21
CCC1	YLR220W	YAE1	P47118	141 aa	Predicted RBP	13.71	□□□□□ -0.21
CCC1	YLR220W	PAU12	P53343	120 aa		13.71	□□□□□ -0.21
CCC1	YLR220W	RCF1	Q03713	159 aa		13.71	□□□□□ -0.21
CCC1	YLR220W	RVB1	Q03940	463 aa	Known RBP	13.71	□□□□□ -0.21
CCC1	YLR220W	COQ11	Q05892	277 aa		13.71	□□□□□ -0.21
CCC1	YLR220W	CPR2	P23285	205 aa		13.7	□□□□□ -0.22
CCC1	YLR220W	PUT3	P25502	979 aa	Predicted RBP	13.7	□□□□□ -0.22
CCC1	YLR220W	SDS22	P36047	338 aa		13.7	□□□□□ -0.22
CCC1	YLR220W	YBR063C	P38083	404 aa		13.7	□□□□□ -0.22
CCC1	YLR220W	ADO1	P47143	340 aa	Known RBP	13.7	□□□□□ -0.22
CCC1	YLR220W	SAY1	P53324	424 aa		13.7	□□□□□ -0.22
CCC1	YLR220W	AIM36	Q03798	255 aa		13.7	□□□□□ -0.22
CCC1	YLR220W	YDR102C	Q03864	110 aa		13.7	□□□□□ -0.22
CCC1	YLR220W	ARO7	P32178	256 aa		13.69	□□□□□ -0.22
CCC1	YLR220W	MTC6	P38849	526 aa		13.69	□□□□□ -0.22
CCC1	YLR220W	CCC1	P47818	322 aa		13.69	□□□□□ -0.22
CCC1	YLR220W	ACF2	Q12168	779 aa		13.69	□□□□□ -0.22
CCC1	YLR220W	TY1A-BL	Q12266	440 aa		13.69	□□□□□ -0.22
CCC1	YLR220W	YDL180W	Q12301	547 aa		13.69	□□□□□ -0.22
CCC1	YLR220W	MSW1	P04803	379 aa		13.68	□□□□□ -0.22
CCC1	YLR220W	YPK3	P38070	525 aa		13.68	□□□□□ -0.22

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