RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	CGI121	Q03705	181 aa	Known RBP	4.11	□□□□□ -1.75
CBF5	YLR175W	YDR249C	Q03787	373 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	YMR087W	Q04299	284 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	SNO4	Q04902	237 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	BUR2	Q05949	395 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	YPR196W	Q06595	470 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	CDA2	Q06703	312 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	FMP45	Q07651	309 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	COQ10	Q08058	207 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	YOL024W	Q08172	172 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	YOR389W	Q08912	624 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	HSP33	Q08914	237 aa	Known RBP	4.11	□□□□□ -1.75
CBF5	YLR175W	YPL278C	Q08990	100 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	HSP32	Q08992	237 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	YDL177C	Q12257	170 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	PCL9	Q12477	304 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	SCO1	P23833	295 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	DPB2	P24482	689 aa	Predicted RBP	4.11	□□□□□ -1.75
CBF5	YLR175W	YCR102C	P25608	368 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	NDC1	P32500	655 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	YEF1	P32622	495 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	KAE1	P36132	386 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	RTC2	P38279	296 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	YHR035W	P38769	630 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	YHR180W	P38868	163 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	MLH1	P38920	769 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	HIS6	P40545	261 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	YFR054C	P43622	192 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	SSY5	P47002	699 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	ECL1	P48235	211 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	SHE4	P51534	789 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	HOL1	P53389	586 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	YNR062C	P53748	327 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	PGA1	P53896	198 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	NUP49	Q02199	472 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	RCF1	Q03713	159 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	NUP53	Q03790	475 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	CYK3	Q07533	885 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	RRG7	Q08774	242 aa	Predicted RBP	4.11	□□□□□ -1.75
CBF5	YLR175W	YPL191C	Q08930	360 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	GRE1	Q08969	168 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	THP3	Q12049	470 aa	Known RBP	4.11	□□□□□ -1.75
CBF5	YLR175W	YLR122C	Q12312	125 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	TMA17	Q12513	150 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	REP1	P03871	373 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	PEP4	P07267	405 aa	Known RBP	4.1	□□□□□ -1.75
CBF5	YLR175W	YGL041W-A	P0C5N3	154 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	PCL2	P25693	308 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	CPR3	P25719	182 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	PRE2	P30656	287 aa	Known RBP	4.1	□□□□□ -1.75
CBF5	YLR175W	PDR3	P33200	976 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	SEF1	P34228	1148 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	UTP11	P34247	250 aa	Predicted RBP	4.1	□□□□□ -1.75
CBF5	YLR175W	TPO5	P36029	618 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	YPK3	P38070	525 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	OM14	P38325	134 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	YER184C	P39961	794 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	AIM10	P39965	576 aa	Known RBP	4.1	□□□□□ -1.75
CBF5	YLR175W	YNL208W	P40159	199 aa	Known RBP	4.1	□□□□□ -1.75
CBF5	YLR175W	SEC24	P40482	926 aa	Known RBP	4.1	□□□□□ -1.75
CBF5	YLR175W	RPE1	P46969	238 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	IKS1	P47042	667 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	EFM3	P47163	339 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	PGU1	P47180	361 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	PRP3	Q03338	469 aa	Predicted RBP	4.1	□□□□□ -1.75
CBF5	YLR175W	SSY1	Q03770	852 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	FIN1	Q03898	291 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	YMR315W	Q04869	349 aa	Known RBP	4.1	□□□□□ -1.75
CBF5	YLR175W	YLR173W	Q06247	608 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	IRC19	Q07843	230 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	YRA1	Q12159	226 aa	Known RBP	4.1	□□□□□ -1.75
CBF5	YLR175W	RBD2	Q12270	262 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	YOR343C	Q12484	108 aa		4.1	□□□□□ -1.75
CBF5	YLR175W	MET2	P08465	486 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	YHR214C-D	P0CX93	97 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	RFA1	P22336	621 aa	Known RBP	4.09	□□□□□ -1.75
CBF5	YLR175W	ERG8	P24521	451 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	RAD51	P25454	400 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	NAM9	P27929	486 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	FUN19	P28003	413 aa	Predicted RBP	4.09	□□□□□ -1.75
CBF5	YLR175W	ECT1	P33412	323 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
CBF5	YLR175W	MAL32	P38158	584 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	VBA2	P38358	474 aa	Known RBP	4.09	□□□□□ -1.75
CBF5	YLR175W	FET3	P38993	636 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	YER010C	P40011	234 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	PCL6	P40038	420 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	POP1	P41812	875 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	PFS2	P42841	465 aa	Known RBP	4.09	□□□□□ -1.75
CBF5	YLR175W	YGR054W	P53235	642 aa	Known RBP	4.09	□□□□□ -1.75
CBF5	YLR175W	MAL12	P53341	584 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	OGG1	P53397	376 aa	Predicted RBP	4.09	□□□□□ -1.75
CBF5	YLR175W	APM1	Q00776	475 aa	Predicted RBP	4.09	□□□□□ -1.75
CBF5	YLR175W	YDR209C	Q03480	137 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	SCS7	Q03529	384 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	SNX41	Q04053	625 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	MDM36	Q06820	579 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	RDR1	Q08904	546 aa		4.09	□□□□□ -1.75
CBF5	YLR175W	HMG1	P12683	1054 aa		4.08	□□□□□ -1.76
CBF5	YLR175W	RPB8	P20436	146 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms