RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C SPT7P35177 1332 aa2.42□□□□□ -2.02
SMD3YLR147C YHL044WP38727 235 aa2.42□□□□□ -2.02
SMD3YLR147C CAJ1P39101 391 aa2.42□□□□□ -2.02
SMD3YLR147C AIM20P40451 204 aa2.42□□□□□ -2.02
SMD3YLR147C CLP1Q08685 445 aaPredicted RBP2.42□□□□□ -2.02
SMD3YLR147C UTP23Q12339 254 aaKnown RBP2.42□□□□□ -2.02
SMD3YLR147C MRX4Q12467 430 aa2.42□□□□□ -2.02
SMD3YLR147C DCP1Q12517 231 aaPredicted RBP2.42□□□□□ -2.02
SMD3YLR147C LAG2Q92325 660 aa2.42□□□□□ -2.02
SMD3YLR147C MSS116P15424 664 aaKnown RBP2.41□□□□□ -2.02
SMD3YLR147C YCR025CP25352 136 aa2.41□□□□□ -2.02
SMD3YLR147C ZRT1P32804 376 aa2.41□□□□□ -2.02
SMD3YLR147C YPC1P38298 316 aa2.41□□□□□ -2.02
SMD3YLR147C YFL064CP43540 174 aa2.41□□□□□ -2.02
SMD3YLR147C MIX17Q03667 156 aa2.41□□□□□ -2.02
SMD3YLR147C VPS20Q04272 221 aa2.41□□□□□ -2.02
SMD3YLR147C YDR114CQ04597 100 aa2.41□□□□□ -2.02
SMD3YLR147C PAA1Q12447 191 aaKnown RBP2.41□□□□□ -2.02
SMD3YLR147C CDC37P06101 506 aaKnown RBP2.4□□□□□ -2.03
SMD3YLR147C YOL163WP0CF20 169 aa2.4□□□□□ -2.03
SMD3YLR147C TPM1P17536 199 aaKnown RBP2.4□□□□□ -2.03
SMD3YLR147C FET3P38993 636 aa2.4□□□□□ -2.03
SMD3YLR147C UBC13P52490 153 aa2.4□□□□□ -2.03
SMD3YLR147C OSH6Q02201 448 aa2.4□□□□□ -2.03
SMD3YLR147C CAB5Q03941 241 aa2.4□□□□□ -2.03
SMD3YLR147C SAM4Q08985 325 aaKnown RBP2.4□□□□□ -2.03
SMD3YLR147C YPL278CQ08990 100 aa2.4□□□□□ -2.03
SMD3YLR147C YAK1P14680 807 aa2.39□□□□□ -2.03
SMD3YLR147C RSA4P25382 515 aaKnown RBP2.39□□□□□ -2.03
SMD3YLR147C CDC13P32797 924 aaKnown RBP2.39□□□□□ -2.03
SMD3YLR147C MRPL6P32904 214 aa2.39□□□□□ -2.03
SMD3YLR147C TPO5P36029 618 aa2.39□□□□□ -2.03
SMD3YLR147C YKR032WP36127 104 aa2.39□□□□□ -2.03
SMD3YLR147C SWC5P38326 303 aa2.39□□□□□ -2.03
SMD3YLR147C VAB2P40003 282 aa2.39□□□□□ -2.03
SMD3YLR147C SYS1P41544 203 aa2.39□□□□□ -2.03
SMD3YLR147C LIF1P53150 421 aa2.39□□□□□ -2.03
SMD3YLR147C PRO2P54885 456 aaKnown RBP2.39□□□□□ -2.03
SMD3YLR147C ARC18Q05933 178 aaKnown RBP2.39□□□□□ -2.03
SMD3YLR147C FEX1Q08913 375 aa2.39□□□□□ -2.03
SMD3YLR147C FEX2Q08991 375 aa2.39□□□□□ -2.03
SMD3YLR147C IMP3P32899 183 aaPredicted RBP2.38□□□□□ -2.03
SMD3YLR147C PBP4Q07362 185 aaKnown RBP2.38□□□□□ -2.03
SMD3YLR147C PFK27Q12471 397 aaPredicted RBP2.38□□□□□ -2.03
SMD3YLR147C IFM1P25038 676 aa2.37□□□□□ -2.03
SMD3YLR147C GCG1P32656 232 aaKnown RBP2.37□□□□□ -2.03
SMD3YLR147C PCL7P40186 285 aa2.37□□□□□ -2.03
SMD3YLR147C YIL012WP40551 113 aa2.37□□□□□ -2.03
SMD3YLR147C YGR266WP53326 701 aa2.37□□□□□ -2.03
SMD3YLR147C YMR111CQ04461 462 aaPredicted RBP2.37□□□□□ -2.03
SMD3YLR147C RPL31AP0C2H8 113 aaKnown RBP2.36□□□□□ -2.03
SMD3YLR147C PET18P25362 215 aa2.36□□□□□ -2.03
SMD3YLR147C MRPL3P36516 390 aa2.36□□□□□ -2.03
SMD3YLR147C YBL081WP38180 368 aaKnown RBP2.36□□□□□ -2.03
SMD3YLR147C MBA1P38300 278 aa2.36□□□□□ -2.03
SMD3YLR147C END3P39013 349 aa2.36□□□□□ -2.03
SMD3YLR147C PES4P39684 611 aa2.36□□□□□ -2.03
SMD3YLR147C SSO2P39926 295 aa2.36□□□□□ -2.03
SMD3YLR147C GDS1P41913 522 aa2.36□□□□□ -2.03
SMD3YLR147C BIO4P53630 237 aa2.36□□□□□ -2.03
SMD3YLR147C PRR2Q12310 699 aa2.36□□□□□ -2.03
SMD3YLR147C YPR1Q12458 312 aa2.36□□□□□ -2.03
SMD3YLR147C VMA2P16140 517 aaKnown RBP2.35□□□□□ -2.03
SMD3YLR147C RPL16BP26785 198 aaKnown RBP2.35□□□□□ -2.03
SMD3YLR147C MED6P38782 295 aa2.35□□□□□ -2.03
SMD3YLR147C CDC40P40968 455 aaPredicted RBP2.35□□□□□ -2.03
SMD3YLR147C PRP24P49960 444 aaKnown RBP2.35□□□□□ -2.03
SMD3YLR147C RIB4P50861 169 aaPredicted RBP2.35□□□□□ -2.03
SMD3YLR147C SWC4P53201 476 aa2.35□□□□□ -2.03
SMD3YLR147C YNL095CP53932 642 aa2.35□□□□□ -2.03
SMD3YLR147C ABZ2Q03266 374 aa2.35□□□□□ -2.03
SMD3YLR147C MGR3Q04472 501 aa2.35□□□□□ -2.03
SMD3YLR147C PEX30Q06169 523 aa2.35□□□□□ -2.03
SMD3YLR147C APC9Q12107 265 aa2.35□□□□□ -2.03
SMD3YLR147C PHO80P20052 293 aa2.34□□□□□ -2.03
SMD3YLR147C IMP1P28627 190 aa2.34□□□□□ -2.03
SMD3YLR147C DBP6P53734 629 aaKnown RBP2.34□□□□□ -2.03
SMD3YLR147C YLR297WQ05899 129 aa2.34□□□□□ -2.03
SMD3YLR147C TAZ1Q06510 381 aa2.34□□□□□ -2.03
SMD3YLR147C YDL144CQ07589 356 aa2.34□□□□□ -2.03
SMD3YLR147C TIM22Q12328 207 aa2.34□□□□□ -2.03
SMD3YLR147C IZH4Q99393 312 aa2.34□□□□□ -2.03
SMD3YLR147C CAR2P07991 424 aaKnown RBP2.33□□□□□ -2.04
SMD3YLR147C VPS1P21576 704 aaKnown RBP2.33□□□□□ -2.04
SMD3YLR147C TRX1P22217 103 aaKnown RBP2.33□□□□□ -2.04
SMD3YLR147C YER188WP40103 239 aa2.33□□□□□ -2.04
SMD3YLR147C TPN1P53099 579 aa2.33□□□□□ -2.04
SMD3YLR147C RGM1Q00453 211 aa2.33□□□□□ -2.04
SMD3YLR147C RAD7P06779 565 aa2.32□□□□□ -2.04
SMD3YLR147C GAL7P08431 366 aa2.32□□□□□ -2.04
SMD3YLR147C OPI1P21957 404 aa2.32□□□□□ -2.04
SMD3YLR147C TRM7P38238 310 aaKnown RBP2.32□□□□□ -2.04
SMD3YLR147C KRE29P40026 464 aa2.32□□□□□ -2.04
SMD3YLR147C AVT6P40074 448 aa2.32□□□□□ -2.04
SMD3YLR147C MPP10P47083 593 aaKnown RBP2.32□□□□□ -2.04
SMD3YLR147C MIG2P53035 382 aa2.32□□□□□ -2.04
SMD3YLR147C NNT1Q05874 261 aa2.32□□□□□ -2.04
SMD3YLR147C ATG5Q12380 294 aa2.32□□□□□ -2.04
SMD3YLR147C HIS3P06633 220 aa2.31□□□□□ -2.04
SMD3YLR147C ZWF1P11412 505 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms