RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C VBA1Q04301 562 aa2.24□□□□□ -2.05
NYV1YLR093C YLR283WQ05867 314 aa2.24□□□□□ -2.05
NYV1YLR093C FAR10Q06001 478 aa2.24□□□□□ -2.05
NYV1YLR093C SDO1Q07953 250 aaKnown RBP2.24□□□□□ -2.05
NYV1YLR093C BTS1Q12051 335 aa2.24□□□□□ -2.05
NYV1YLR093C ATP16Q12165 160 aa2.24□□□□□ -2.05
NYV1YLR093C SFM1Q12314 213 aa2.24□□□□□ -2.05
NYV1YLR093C ERP3Q12403 225 aa2.24□□□□□ -2.05
NYV1YLR093C FOL3Q12676 427 aaPredicted RBP2.24□□□□□ -2.05
NYV1YLR093C HTZ1Q12692 134 aaKnown RBP2.24□□□□□ -2.05
NYV1YLR093C IZH4Q99393 312 aa2.24□□□□□ -2.05
NYV1YLR093C JIP3O13555 125 aa2.23□□□□□ -2.05
NYV1YLR093C RPS14AP06367 137 aaKnown RBP2.23□□□□□ -2.05
NYV1YLR093C RAD3P06839 778 aa2.23□□□□□ -2.05
NYV1YLR093C SPS100P13130 326 aa2.23□□□□□ -2.05
NYV1YLR093C MET16P18408 261 aaPredicted RBP2.23□□□□□ -2.05
NYV1YLR093C RPB4P20433 221 aaPredicted RBP2.23□□□□□ -2.05
NYV1YLR093C RPS5P26783 225 aaKnown RBP2.23□□□□□ -2.05
NYV1YLR093C ZIP1P31111 875 aa2.23□□□□□ -2.05
NYV1YLR093C TPS2P31688 896 aaKnown RBP2.23□□□□□ -2.05
NYV1YLR093C SUA5P32579 426 aa2.23□□□□□ -2.05
NYV1YLR093C MRPL6P32904 214 aa2.23□□□□□ -2.05
NYV1YLR093C RCK1P38622 512 aa2.23□□□□□ -2.05
NYV1YLR093C BIG1P38813 335 aa2.23□□□□□ -2.05
NYV1YLR093C CHL4P38907 458 aa2.23□□□□□ -2.05
NYV1YLR093C RPS14BP39516 138 aaKnown RBP2.23□□□□□ -2.05
NYV1YLR093C RTR1P40084 226 aaPredicted RBP2.23□□□□□ -2.05
NYV1YLR093C MSS2P40990 351 aa2.23□□□□□ -2.05
NYV1YLR093C YNL320WP42840 284 aa2.23□□□□□ -2.05
NYV1YLR093C OTU1P43558 301 aa2.23□□□□□ -2.05
NYV1YLR093C MOB2P43563 287 aa2.23□□□□□ -2.05
NYV1YLR093C VAC7P53950 1165 aa2.23□□□□□ -2.05
NYV1YLR093C ASR1Q06834 288 aa2.23□□□□□ -2.05
NYV1YLR093C YOR029WQ12243 111 aa2.23□□□□□ -2.05
NYV1YLR093C PRM4Q12498 284 aa2.23□□□□□ -2.05
NYV1YLR093C TDH2P00358 332 aaKnown RBP2.22□□□□□ -2.05
NYV1YLR093C CTA1P15202 515 aa2.22□□□□□ -2.05
NYV1YLR093C DAL82P21705 255 aa2.22□□□□□ -2.05
NYV1YLR093C YCR016WP25617 290 aaKnown RBP2.22□□□□□ -2.05
NYV1YLR093C CYM1P32898 989 aa2.22□□□□□ -2.05
NYV1YLR093C BMH2P34730 273 aaKnown RBP2.22□□□□□ -2.05
NYV1YLR093C YKL063CP35725 167 aa2.22□□□□□ -2.05
NYV1YLR093C AIM23P47015 356 aa2.22□□□□□ -2.05
NYV1YLR093C SWC4P53201 476 aa2.22□□□□□ -2.05
NYV1YLR093C VHT1P53241 593 aa2.22□□□□□ -2.05
NYV1YLR093C TPC1P53257 314 aa2.22□□□□□ -2.05
NYV1YLR093C ALG11P53954 548 aaKnown RBP2.22□□□□□ -2.05
NYV1YLR093C ADH6Q04894 360 aaKnown RBP2.22□□□□□ -2.05
NYV1YLR093C MRX9Q07349 420 aaKnown RBP2.22□□□□□ -2.05
NYV1YLR093C MCH1Q07376 486 aa2.22□□□□□ -2.05
NYV1YLR093C MSH5Q12175 901 aa2.22□□□□□ -2.05
NYV1YLR093C UTP23Q12339 254 aaKnown RBP2.22□□□□□ -2.05
NYV1YLR093C CFT1Q06632 1357 aaKnown RBP2.22□□□□□ -2.05
NYV1YLR093C CHD1P32657 1468 aa2.21□□□□□ -2.06
NYV1YLR093C RPP0P05317 312 aaKnown RBP2.21□□□□□ -2.06
NYV1YLR093C TFS1P14306 219 aa2.21□□□□□ -2.06
NYV1YLR093C ZRC1P20107 442 aa2.21□□□□□ -2.06
NYV1YLR093C RPO26P20435 155 aa2.21□□□□□ -2.06
NYV1YLR093C VPS1P21576 704 aaKnown RBP2.21□□□□□ -2.06
NYV1YLR093C GIT1P25346 518 aa2.21□□□□□ -2.06
NYV1YLR093C RPL16BP26785 198 aaKnown RBP2.21□□□□□ -2.06
NYV1YLR093C LDS1P31379 325 aa2.21□□□□□ -2.06
NYV1YLR093C KRE6P32486 720 aa2.21□□□□□ -2.06
NYV1YLR093C DDI1P40087 428 aa2.21□□□□□ -2.06
NYV1YLR093C YPT32P51996 222 aaKnown RBP2.21□□□□□ -2.06
NYV1YLR093C PGA2P53903 129 aa2.21□□□□□ -2.06
NYV1YLR093C YNL040WP53960 456 aaPredicted RBP2.21□□□□□ -2.06
NYV1YLR093C SKI8Q02793 397 aaPredicted RBP2.21□□□□□ -2.06
NYV1YLR093C OST6Q03723 332 aa2.21□□□□□ -2.06
NYV1YLR093C FSH2Q05015 223 aa2.21□□□□□ -2.06
NYV1YLR093C YLR446WQ06204 433 aa2.21□□□□□ -2.06
NYV1YLR093C TAZ1Q06510 381 aa2.21□□□□□ -2.06
NYV1YLR093C DTD1Q07648 150 aaKnown RBP2.21□□□□□ -2.06
NYV1YLR093C PAM18Q07914 168 aa2.21□□□□□ -2.06
NYV1YLR093C RPN8Q08723 338 aaKnown RBP2.21□□□□□ -2.06
NYV1YLR093C NAG1Q8TGN9 163 aa2.21□□□□□ -2.06
NYV1YLR093C MATALPHA1P0CY06 175 aa2.2□□□□□ -2.06
NYV1YLR093C HMLALPHA1P0CY07 175 aa2.2□□□□□ -2.06
NYV1YLR093C POF1P25576 258 aa2.2□□□□□ -2.06
NYV1YLR093C DEP1P31385 405 aa2.2□□□□□ -2.06
NYV1YLR093C SPT4P32914 102 aaPredicted RBP2.2□□□□□ -2.06
NYV1YLR093C CSE1P33307 960 aa2.2□□□□□ -2.06
NYV1YLR093C YKL187CP34231 750 aa2.2□□□□□ -2.06
NYV1YLR093C KTI12P34253 313 aaKnown RBP2.2□□□□□ -2.06
NYV1YLR093C AIM29P36154 155 aa2.2□□□□□ -2.06
NYV1YLR093C MRX3P38172 270 aa2.2□□□□□ -2.06
NYV1YLR093C SHE1P38200 338 aa2.2□□□□□ -2.06
NYV1YLR093C LDB7P38210 180 aa2.2□□□□□ -2.06
NYV1YLR093C PRS2P38620 318 aaKnown RBP2.2□□□□□ -2.06
NYV1YLR093C TCD1P38756 429 aa2.2□□□□□ -2.06
NYV1YLR093C PET8P38921 284 aa2.2□□□□□ -2.06
NYV1YLR093C PEX22P39718 180 aa2.2□□□□□ -2.06
NYV1YLR093C YER184CP39961 794 aa2.2□□□□□ -2.06
NYV1YLR093C YNL208WP40159 199 aaKnown RBP2.2□□□□□ -2.06
NYV1YLR093C YJR054WP47114 497 aa2.2□□□□□ -2.06
NYV1YLR093C IBA57P47158 497 aa2.2□□□□□ -2.06
NYV1YLR093C CDH1P53197 566 aa2.2□□□□□ -2.06
NYV1YLR093C CPD1P53314 239 aa2.2□□□□□ -2.06
NYV1YLR093C NOP13P53883 403 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
NYV1YLR093C PRP38Q00723 242 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms