RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBI4	YLL039C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
UBI4	YLL039C	WTM1	Q12363	437 aa	Known RBP	4.13	□□□□□ -1.75
UBI4	YLL039C	NPC2	Q12408	173 aa		4.13	□□□□□ -1.75
UBI4	YLL039C	PAR32	Q12515	295 aa	Known RBP	4.13	□□□□□ -1.75
UBI4	YLL039C	MHF2	Q3E829	80 aa		4.13	□□□□□ -1.75
UBI4	YLL039C	MDM12	Q92328	271 aa		4.13	□□□□□ -1.75
UBI4	YLL039C	YBR056W-A	I2HB52	66 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	TDH1	P00360	332 aa	Known RBP	4.12	□□□□□ -1.75
UBI4	YLL039C	RAD7	P06779	565 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	YSF3	P0C074	85 aa	Predicted RBP	4.12	□□□□□ -1.75
UBI4	YLL039C	CNB1	P25296	175 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	ATG22	P25568	528 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	YIM1	P28625	365 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	MRPL6	P32904	214 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	VAM7	P32912	316 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	AFR1	P33304	620 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	SEF1	P34228	1148 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	YKL107W	P34251	309 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	YOR062C	P36025	268 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	CBT1	P36038	271 aa	Predicted RBP	4.12	□□□□□ -1.75
UBI4	YLL039C	SDS22	P36047	338 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	MRPL3	P36516	390 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	ZTA1	P38230	334 aa	Known RBP	4.12	□□□□□ -1.75
UBI4	YLL039C	APD1	P38281	316 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	SDH8	P38345	138 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	ARN2	P38724	620 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	IPI1	P38803	334 aa	Predicted RBP	4.12	□□□□□ -1.75
UBI4	YLL039C	MLH1	P38920	769 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	SOP4	P39543	234 aa	Predicted RBP	4.12	□□□□□ -1.75
UBI4	YLL039C	RBG1	P39729	369 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	URM1	P40554	99 aa	Predicted RBP	4.12	□□□□□ -1.75
UBI4	YLL039C	YGR201C	P42936	225 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	ECM27	P47144	725 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	YJR120W	P47157	116 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	YJR141W	P47172	347 aa	Predicted RBP	4.12	□□□□□ -1.75
UBI4	YLL039C	TOM22	P49334	152 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	MRK1	P50873	501 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	HHO1	P53551	258 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	YNR068C	P53754	272 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	YPL068C	Q02749	293 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	TDA1	Q03533	586 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	NUP53	Q03790	475 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	PEX12	Q04370	399 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	NAT4	Q04751	285 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	SYC1	Q08553	188 aa	Predicted RBP	4.12	□□□□□ -1.75
UBI4	YLL039C	DCI1	Q08558	271 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	YOR378W	Q08902	515 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	FMP40	Q08968	688 aa	Predicted RBP	4.12	□□□□□ -1.75
UBI4	YLL039C	YPR063C	Q12160	140 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	YDL199C	Q12407	687 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	PFK27	Q12471	397 aa	Predicted RBP	4.12	□□□□□ -1.75
UBI4	YLL039C	MHF1	Q3E835	90 aa		4.12	□□□□□ -1.75
UBI4	YLL039C	PET54	P10834	293 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	BAR1	P12630	587 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	NCP1	P16603	691 aa	Known RBP	4.11	□□□□□ -1.75
UBI4	YLL039C	PBN1	P25580	416 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	KRR1	P25586	316 aa	Predicted RBP	4.11	□□□□□ -1.75
UBI4	YLL039C	YCR102C	P25608	368 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	NAM9	P27929	486 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	SAC1	P32368	623 aa	Known RBP	4.11	□□□□□ -1.75
UBI4	YLL039C	ARP2	P32381	391 aa	Known RBP	4.11	□□□□□ -1.75
UBI4	YLL039C	ECM25	P32525	599 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	HBS1	P32769	611 aa	Known RBP	4.11	□□□□□ -1.75
UBI4	YLL039C	RIB1	P38066	345 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	GPX2	P38143	162 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	CDS1	P38221	457 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	ECM8	P38246	354 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	COS8	P38723	381 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	BIG1	P38813	335 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	ANS1	P38832	159 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	RMD6	P39975	231 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	BUR6	P40096	142 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	YIL067C	P40514	678 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	SER2	P42941	309 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	BIT61	P47041	543 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	IRC18	P47056	224 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	MDE1	P47095	244 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	EFM3	P47163	339 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	DIE2	P50076	525 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	CWC23	P52868	283 aa	Predicted RBP	4.11	□□□□□ -1.75
UBI4	YLL039C	SEH1	P53011	349 aa	Known RBP	4.11	□□□□□ -1.75
UBI4	YLL039C	PEF1	P53238	335 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	MPA43	P53583	542 aa	Predicted RBP	4.11	□□□□□ -1.75
UBI4	YLL039C	CAF40	P53829	373 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	YLR460C	P54007	376 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	SPR6	Q01684	191 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	SCS7	Q03529	384 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	RIM13	Q03792	727 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	DBP9	Q06218	594 aa	Known RBP	4.11	□□□□□ -1.75
UBI4	YLL039C	YLR040C	Q07988	224 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	ZEO1	Q08245	113 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	YOR376W	Q08900	122 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	YPL191C	Q08930	360 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	PSF1	Q12488	208 aa		4.11	□□□□□ -1.75
UBI4	YLL039C	RPS21B	Q3E754	87 aa	Known RBP	4.11	□□□□□ -1.75
UBI4	YLL039C	REP2	P03872	296 aa		4.1	□□□□□ -1.75
UBI4	YLL039C	HIS7	P33734	552 aa	Known RBP	4.1	□□□□□ -1.75
UBI4	YLL039C	LOT5	P34234	306 aa		4.1	□□□□□ -1.75
UBI4	YLL039C	OM14	P38325	134 aa		4.1	□□□□□ -1.75
UBI4	YLL039C	PTI1	P39927	425 aa	Predicted RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 47 ms