RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	APJ1	P53940	528 aa		4.19	□□□□□ -1.74
SKG1	YKR100C	RNY1	Q02933	434 aa	Known RBP	4.19	□□□□□ -1.74
SKG1	YKR100C	ROY1	Q04847	553 aa		4.19	□□□□□ -1.74
SKG1	YKR100C	RPS3	P05750	240 aa	Known RBP	4.18	□□□□□ -1.74
SKG1	YKR100C	CBP6	P07253	162 aa	Predicted RBP	4.18	□□□□□ -1.74
SKG1	YKR100C	YAK1	P14680	807 aa		4.18	□□□□□ -1.74
SKG1	YKR100C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SKG1	YKR100C	CTR86	P25355	563 aa		4.18	□□□□□ -1.74
SKG1	YKR100C	ADE1	P27616	306 aa		4.18	□□□□□ -1.74
SKG1	YKR100C	NUP2	P32499	720 aa		4.18	□□□□□ -1.74
SKG1	YKR100C	YIL054W	P40524	105 aa		4.18	□□□□□ -1.74
SKG1	YKR100C	YIL029C	P40538	142 aa		4.18	□□□□□ -1.74
SKG1	YKR100C	GAB1	P41733	394 aa		4.18	□□□□□ -1.74
SKG1	YKR100C	YFL064C	P43540	174 aa		4.18	□□□□□ -1.74
SKG1	YKR100C	CAK1	P43568	368 aa	Predicted RBP	4.18	□□□□□ -1.74
SKG1	YKR100C	YHC3	P47040	408 aa		4.18	□□□□□ -1.74
SKG1	YKR100C	YGR067C	P53243	804 aa		4.18	□□□□□ -1.74
SKG1	YKR100C	SKI7	Q08491	747 aa	Predicted RBP	4.18	□□□□□ -1.74
SKG1	YKR100C	YPR202W	Q08993	238 aa		4.18	□□□□□ -1.74
SKG1	YKR100C	RAD57	P25301	460 aa		4.17	□□□□□ -1.74
SKG1	YKR100C	RPC37	P36121	282 aa		4.17	□□□□□ -1.74
SKG1	YKR100C	FIG1	P38224	298 aa		4.17	□□□□□ -1.74
SKG1	YKR100C	RPS0B	P46654	252 aa	Known RBP	4.17	□□□□□ -1.74
SKG1	YKR100C	PHB2	P50085	310 aa		4.17	□□□□□ -1.74
SKG1	YKR100C	APC4	Q04601	652 aa		4.17	□□□□□ -1.74
SKG1	YKR100C	YMR310C	Q04867	317 aa	Predicted RBP	4.17	□□□□□ -1.74
SKG1	YKR100C	CAR2	P07991	424 aa	Known RBP	4.16	□□□□□ -1.74
SKG1	YKR100C	ITR2	P30606	609 aa		4.16	□□□□□ -1.74
SKG1	YKR100C	NPL6	P32832	435 aa		4.16	□□□□□ -1.74
SKG1	YKR100C	LDB7	P38210	180 aa		4.16	□□□□□ -1.74
SKG1	YKR100C	JLP2	P40206	208 aa		4.16	□□□□□ -1.74
SKG1	YKR100C	UTP18	P40362	594 aa	Predicted RBP	4.16	□□□□□ -1.74
SKG1	YKR100C	RHO5	P53879	331 aa	Known RBP	4.16	□□□□□ -1.74
SKG1	YKR100C	VPS9	P54787	451 aa		4.16	□□□□□ -1.74
SKG1	YKR100C	CIK1	Q01649	594 aa		4.16	□□□□□ -1.74
SKG1	YKR100C	OSH6	Q02201	448 aa		4.16	□□□□□ -1.74
SKG1	YKR100C	YPR174C	Q06616	221 aa	Predicted RBP	4.16	□□□□□ -1.74
SKG1	YKR100C	YOR012W	Q12351	137 aa		4.16	□□□□□ -1.74
SKG1	YKR100C	YOL159C-A	Q3E769	90 aa		4.16	□□□□□ -1.74
SKG1	YKR100C	SPO12	P17123	173 aa		4.15	□□□□□ -1.75
SKG1	YKR100C	DAP2	P18962	818 aa		4.15	□□□□□ -1.75
SKG1	YKR100C	RHB1	P25378	209 aa		4.15	□□□□□ -1.75
SKG1	YKR100C	IMP3	P32899	183 aa	Predicted RBP	4.15	□□□□□ -1.75
SKG1	YKR100C	HCS1	P34243	683 aa		4.15	□□□□□ -1.75
SKG1	YKR100C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
SKG1	YKR100C	YBR220C	P38318	560 aa		4.15	□□□□□ -1.75
SKG1	YKR100C	AIM10	P39965	576 aa	Known RBP	4.15	□□□□□ -1.75
SKG1	YKR100C	SUB1	P54000	292 aa	Known RBP	4.15	□□□□□ -1.75
SKG1	YKR100C	RAF1	Q06891	181 aa		4.15	□□□□□ -1.75
SKG1	YKR100C	YSF3	P0C074	85 aa	Predicted RBP	4.14	□□□□□ -1.75
SKG1	YKR100C	CLB1	P24868	471 aa		4.14	□□□□□ -1.75
SKG1	YKR100C	YEF1	P32622	495 aa		4.14	□□□□□ -1.75
SKG1	YKR100C	YHI9	P38765	294 aa		4.14	□□□□□ -1.75
SKG1	YKR100C	YJR085C	P47131	105 aa	Known RBP	4.14	□□□□□ -1.75
SKG1	YKR100C	MRPL19	P53875	158 aa		4.14	□□□□□ -1.75
SKG1	YKR100C	YPL077C	Q02831	240 aa		4.14	□□□□□ -1.75
SKG1	YKR100C	BCH1	Q05029	724 aa		4.14	□□□□□ -1.75
SKG1	YKR100C	YLR446W	Q06204	433 aa		4.14	□□□□□ -1.75
SKG1	YKR100C	RAX2	Q12465	1220 aa		4.14	□□□□□ -1.75
SKG1	YKR100C	TPS2	P31688	896 aa	Known RBP	4.13	□□□□□ -1.75
SKG1	YKR100C	SOR1	P35497	357 aa	Known RBP	4.13	□□□□□ -1.75
SKG1	YKR100C	YHR127W	P38833	243 aa	Known RBP	4.13	□□□□□ -1.75
SKG1	YKR100C	SOK1	P40317	901 aa		4.13	□□□□□ -1.75
SKG1	YKR100C	RPL10	P41805	221 aa	Known RBP	4.13	□□□□□ -1.75
SKG1	YKR100C	MDE1	P47095	244 aa		4.13	□□□□□ -1.75
SKG1	YKR100C	YJR141W	P47172	347 aa	Predicted RBP	4.13	□□□□□ -1.75
SKG1	YKR100C	PGU1	P47180	361 aa		4.13	□□□□□ -1.75
SKG1	YKR100C	GPI15	P53961	229 aa		4.13	□□□□□ -1.75
SKG1	YKR100C	SOR2	Q07786	357 aa		4.13	□□□□□ -1.75
SKG1	YKR100C	FCY22	Q12119	530 aa		4.13	□□□□□ -1.75
SKG1	YKR100C	VAM3	Q12241	283 aa		4.13	□□□□□ -1.75
SKG1	YKR100C	IZH2	Q12442	317 aa		4.13	□□□□□ -1.75
SKG1	YKR100C	RTN2	Q12443	393 aa		4.13	□□□□□ -1.75
SKG1	YKR100C	IZH4	Q99393	312 aa		4.13	□□□□□ -1.75
SKG1	YKR100C	CDC33	P07260	213 aa	Known RBP	4.12	□□□□□ -1.75
SKG1	YKR100C	RPS5	P26783	225 aa	Known RBP	4.12	□□□□□ -1.75
SKG1	YKR100C	VMA11	P32842	164 aa		4.12	□□□□□ -1.75
SKG1	YKR100C	TPO5	P36029	618 aa		4.12	□□□□□ -1.75
SKG1	YKR100C	AIM18	P38884	321 aa		4.12	□□□□□ -1.75
SKG1	YKR100C	BI3	Q9ZZW7	517 aa		4.12	□□□□□ -1.75
SKG1	YKR100C	NAM2	P11325	894 aa		4.11	□□□□□ -1.75
SKG1	YKR100C	SUI1	P32911	108 aa	Known RBP	4.11	□□□□□ -1.75
SKG1	YKR100C	YPT52	P36018	234 aa	Known RBP	4.11	□□□□□ -1.75
SKG1	YKR100C	MID2	P36027	376 aa		4.11	□□□□□ -1.75
SKG1	YKR100C	RRN10	P38204	145 aa		4.11	□□□□□ -1.75
SKG1	YKR100C	HSM3	P38348	480 aa		4.11	□□□□□ -1.75
SKG1	YKR100C	SMC2	P38989	1170 aa	Known RBP	4.11	□□□□□ -1.75
SKG1	YKR100C	RPN9	Q04062	393 aa	Known RBP	4.11	□□□□□ -1.75
SKG1	YKR100C	SXM1	Q04175	944 aa	Known RBP	4.11	□□□□□ -1.75
SKG1	YKR100C	CSI2	Q08054	341 aa		4.11	□□□□□ -1.75
SKG1	YKR100C	RKM1	Q08961	583 aa	Predicted RBP	4.11	□□□□□ -1.75
SKG1	YKR100C	YOS9	Q99220	542 aa		4.11	□□□□□ -1.75
SKG1	YKR100C	MSI1	P13712	422 aa		4.1	□□□□□ -1.75
SKG1	YKR100C	ZIP1	P31111	875 aa		4.1	□□□□□ -1.75
SKG1	YKR100C	SWC5	P38326	303 aa		4.1	□□□□□ -1.75
SKG1	YKR100C	MIG3	P39943	394 aa		4.1	□□□□□ -1.75
SKG1	YKR100C	NDE1	P40215	560 aa		4.1	□□□□□ -1.75
SKG1	YKR100C	SDC1	Q03323	175 aa		4.1	□□□□□ -1.75
SKG1	YKR100C	BOP2	Q06150	570 aa		4.1	□□□□□ -1.75
SKG1	YKR100C	AAD15	Q08361	143 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms