RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C THI72Q08579 599 aa3.67□□□□□ -1.82
SPT23YKL020C NMD4Q12129 218 aa3.67□□□□□ -1.82
SPT23YKL020C YPL066WQ12194 479 aa3.67□□□□□ -1.82
SPT23YKL020C CDC33P07260 213 aaKnown RBP3.67□□□□□ -1.82
SPT23YKL020C PHO2P07269 559 aa3.67□□□□□ -1.82
SPT23YKL020C ERG9P29704 444 aa3.67□□□□□ -1.82
SPT23YKL020C SNC1P31109 117 aa3.67□□□□□ -1.82
SPT23YKL020C GEX2P36173 615 aa3.67□□□□□ -1.82
SPT23YKL020C TAT1P38085 619 aa3.67□□□□□ -1.82
SPT23YKL020C SMB1P40018 196 aaKnown RBP3.67□□□□□ -1.82
SPT23YKL020C COG3P40094 801 aa3.67□□□□□ -1.82
SPT23YKL020C POG1P40473 351 aa3.67□□□□□ -1.82
SPT23YKL020C GLR1P41921 483 aaKnown RBP3.67□□□□□ -1.82
SPT23YKL020C SET4P42948 560 aa3.67□□□□□ -1.82
SPT23YKL020C GAT1P43574 510 aa3.67□□□□□ -1.82
SPT23YKL020C AIF1P52923 378 aa3.67□□□□□ -1.82
SPT23YKL020C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SPT23YKL020C HOF1Q05080 669 aa3.67□□□□□ -1.82
SPT23YKL020C RIF2Q06208 395 aa3.67□□□□□ -1.82
SPT23YKL020C YLR126CQ12288 251 aa3.67□□□□□ -1.82
SPT23YKL020C Q0142Q9ZZW4 58 aa3.67□□□□□ -1.82
SPT23YKL020C RHO2P06781 192 aa3.66□□□□□ -1.82
SPT23YKL020C MDH1P17505 334 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
SPT23YKL020C SAG1P20840 650 aa3.66□□□□□ -1.82
SPT23YKL020C YCL002CP25565 263 aa3.66□□□□□ -1.82
SPT23YKL020C PEX34P25584 144 aa3.66□□□□□ -1.82
SPT23YKL020C VAC17P25591 423 aa3.66□□□□□ -1.82
SPT23YKL020C UGX2P32772 223 aa3.66□□□□□ -1.82
SPT23YKL020C TIP20P33891 701 aa3.66□□□□□ -1.82
SPT23YKL020C FLO10P36170 1169 aa3.66□□□□□ -1.82
SPT23YKL020C AHP1P38013 176 aaKnown RBP3.66□□□□□ -1.82
SPT23YKL020C PPE1P38796 400 aa3.66□□□□□ -1.82
SPT23YKL020C CHL4P38907 458 aa3.66□□□□□ -1.82
SPT23YKL020C RPS26AP39938 119 aaKnown RBP3.66□□□□□ -1.82
SPT23YKL020C RPS26BP39939 119 aaKnown RBP3.66□□□□□ -1.82
SPT23YKL020C HAT2P39984 401 aa3.66□□□□□ -1.82
SPT23YKL020C SLZ1P40167 298 aa3.66□□□□□ -1.82
SPT23YKL020C YJL171CP46992 396 aa3.66□□□□□ -1.82
SPT23YKL020C ASN2P49090 572 aaKnown RBP3.66□□□□□ -1.82
SPT23YKL020C AVT4P50944 713 aa3.66□□□□□ -1.82
SPT23YKL020C TRM12Q04235 462 aa3.66□□□□□ -1.82
SPT23YKL020C GMC1Q04399 608 aa3.66□□□□□ -1.82
SPT23YKL020C INP54Q08227 384 aaKnown RBP3.66□□□□□ -1.82
SPT23YKL020C FSF1Q12029 327 aaKnown RBP3.66□□□□□ -1.82
SPT23YKL020C RKI1Q12189 258 aa3.66□□□□□ -1.82
SPT23YKL020C YLR046CQ12253 270 aa3.66□□□□□ -1.82
SPT23YKL020C KCS1Q12494 1050 aa3.66□□□□□ -1.82
SPT23YKL020C VPS63O13549 108 aa3.66□□□□□ -1.82
SPT23YKL020C YER152CP10356 443 aa3.66□□□□□ -1.82
SPT23YKL020C NAM2P11325 894 aa3.66□□□□□ -1.82
SPT23YKL020C TAH1P25638 111 aaPredicted RBP3.66□□□□□ -1.82
SPT23YKL020C ACB1P31787 87 aa3.66□□□□□ -1.82
SPT23YKL020C APL3P38065 1025 aa3.66□□□□□ -1.82
SPT23YKL020C ALP1P38971 573 aa3.66□□□□□ -1.82
SPT23YKL020C VPS52P39904 641 aa3.66□□□□□ -1.82
SPT23YKL020C FIR1P40020 876 aa3.66□□□□□ -1.82
SPT23YKL020C RRD1P40454 393 aaKnown RBP3.66□□□□□ -1.82
SPT23YKL020C YGL185CP53100 379 aa3.66□□□□□ -1.82
SPT23YKL020C YGR053CP53234 283 aa3.66□□□□□ -1.82
SPT23YKL020C YPL077CQ02831 240 aa3.66□□□□□ -1.82
SPT23YKL020C DOT1Q04089 582 aaKnown RBP3.66□□□□□ -1.82
SPT23YKL020C TMN2Q04562 672 aa3.66□□□□□ -1.82
SPT23YKL020C DPP1Q05521 289 aa3.66□□□□□ -1.82
SPT23YKL020C GPI11Q06636 219 aa3.66□□□□□ -1.82
SPT23YKL020C BTS1Q12051 335 aa3.66□□□□□ -1.82
SPT23YKL020C TDH2P00358 332 aaKnown RBP3.66□□□□□ -1.82
SPT23YKL020C TDH3P00359 332 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
SPT23YKL020C CUP2P15315 225 aa3.66□□□□□ -1.82
SPT23YKL020C MSN1P22148 382 aa3.66□□□□□ -1.82
SPT23YKL020C SGF29P25554 259 aa3.66□□□□□ -1.82
SPT23YKL020C MDH3P32419 343 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
SPT23YKL020C HXT4P32467 576 aa3.66□□□□□ -1.82
SPT23YKL020C TAH11P47112 604 aa3.66□□□□□ -1.82
SPT23YKL020C HXT16P47185 567 aa3.66□□□□□ -1.82
SPT23YKL020C MNN10P50108 393 aaKnown RBP3.66□□□□□ -1.82
SPT23YKL020C MTC3P53077 123 aa3.66□□□□□ -1.82
SPT23YKL020C YNL140CP53910 189 aa3.66□□□□□ -1.82
SPT23YKL020C AQR1P53943 586 aa3.66□□□□□ -1.82
SPT23YKL020C MTQ2Q03920 221 aaPredicted RBP3.66□□□□□ -1.82
SPT23YKL020C SEN15Q04675 128 aa3.66□□□□□ -1.82
SPT23YKL020C RNH202Q05635 350 aa3.66□□□□□ -1.82
SPT23YKL020C RKM5Q12367 367 aa3.66□□□□□ -1.82
SPT23YKL020C TRM13Q12383 476 aa3.66□□□□□ -1.82
SPT23YKL020C RRI1Q12468 440 aa3.66□□□□□ -1.82
SPT23YKL020C YPR145C-AQ2V2P0 78 aa3.66□□□□□ -1.82
SPT23YKL020C HBN1Q96VH4 193 aa3.66□□□□□ -1.82
SPT23YKL020C HTS1P07263 546 aaKnown RBP3.65□□□□□ -1.82
SPT23YKL020C ALG7P07286 448 aa3.65□□□□□ -1.82
SPT23YKL020C YCR102CP25608 368 aa3.65□□□□□ -1.82
SPT23YKL020C SKG6P32900 734 aaPredicted RBP3.65□□□□□ -1.82
SPT23YKL020C ROT2P38138 954 aa3.65□□□□□ -1.82
SPT23YKL020C YBR053CP38235 358 aa3.65□□□□□ -1.82
SPT23YKL020C ATG12P38316 186 aa3.65□□□□□ -1.82
SPT23YKL020C TAX4P47030 604 aa3.65□□□□□ -1.82
SPT23YKL020C YDR132CQ03900 495 aa3.65□□□□□ -1.82
SPT23YKL020C NRT1Q08485 598 aa3.65□□□□□ -1.82
SPT23YKL020C RDR1Q08904 546 aa3.65□□□□□ -1.82
SPT23YKL020C SWT1Q12104 458 aa3.65□□□□□ -1.82
SPT23YKL020C YPL245WQ12179 454 aaKnown RBP3.65□□□□□ -1.82
SPT23YKL020C FRE8Q12209 686 aa3.65□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms