RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C YNR073CP0CX09 502 aa1.95□□□□□ -2.1
UFD4YKL010C ERD1P16151 362 aa1.95□□□□□ -2.1
UFD4YKL010C PDE1P22434 369 aa1.95□□□□□ -2.1
UFD4YKL010C IFM1P25038 676 aa1.95□□□□□ -2.1
UFD4YKL010C MKK2P32491 506 aa1.95□□□□□ -2.1
UFD4YKL010C FMT1P32785 401 aa1.95□□□□□ -2.1
UFD4YKL010C CLB6P32943 380 aa1.95□□□□□ -2.1
UFD4YKL010C TMA19P35691 167 aaKnown RBP1.95□□□□□ -2.1
UFD4YKL010C SFK1P35735 353 aa1.95□□□□□ -2.1
UFD4YKL010C MCM7P38132 845 aa1.95□□□□□ -2.1
UFD4YKL010C YHR078WP38799 552 aa1.95□□□□□ -2.1
UFD4YKL010C VMA7P39111 118 aa1.95□□□□□ -2.1
UFD4YKL010C GWT1P47026 490 aa1.95□□□□□ -2.1
UFD4YKL010C ECL1P48235 211 aa1.95□□□□□ -2.1
UFD4YKL010C MON1P53129 644 aa1.95□□□□□ -2.1
UFD4YKL010C KAP120Q02932 1032 aa1.95□□□□□ -2.1
UFD4YKL010C YLR224WQ05947 369 aa1.95□□□□□ -2.1
UFD4YKL010C GIC2Q06648 383 aa1.95□□□□□ -2.1
UFD4YKL010C RSC58Q07979 502 aa1.95□□□□□ -2.1
UFD4YKL010C SPC3Q12133 184 aa1.95□□□□□ -2.1
UFD4YKL010C YPR063CQ12160 140 aa1.95□□□□□ -2.1
UFD4YKL010C RPS21BQ3E754 87 aaKnown RBP1.95□□□□□ -2.1
UFD4YKL010C YGL041W-AP0C5N3 154 aa1.95□□□□□ -2.1
UFD4YKL010C YCR061WP25639 631 aa1.95□□□□□ -2.1
UFD4YKL010C TRM7P38238 310 aaKnown RBP1.95□□□□□ -2.1
UFD4YKL010C VMA22P38784 181 aa1.95□□□□□ -2.1
UFD4YKL010C PZF1P39933 429 aa1.95□□□□□ -2.1
UFD4YKL010C FAF1P40546 346 aaPredicted RBP1.95□□□□□ -2.1
UFD4YKL010C SYS1P41544 203 aa1.95□□□□□ -2.1
UFD4YKL010C ALB1P47019 175 aaPredicted RBP1.95□□□□□ -2.1
UFD4YKL010C TIM54P47045 478 aa1.95□□□□□ -2.1
UFD4YKL010C SLI1P53304 468 aa1.95□□□□□ -2.1
UFD4YKL010C YMR010WQ03687 405 aa1.95□□□□□ -2.1
UFD4YKL010C SSY1Q03770 852 aa1.95□□□□□ -2.1
UFD4YKL010C MFB1Q04922 465 aa1.95□□□□□ -2.1
UFD4YKL010C DCR2Q05924 578 aa1.95□□□□□ -2.1
UFD4YKL010C YDL109CQ12103 647 aa1.95□□□□□ -2.1
UFD4YKL010C MCP1Q12106 302 aa1.95□□□□□ -2.1
UFD4YKL010C YLR125WQ12138 136 aa1.95□□□□□ -2.1
UFD4YKL010C YDL177CQ12257 170 aa1.95□□□□□ -2.1
UFD4YKL010C ATG31Q12421 196 aa1.95□□□□□ -2.1
UFD4YKL010C PAR32Q12515 295 aaKnown RBP1.95□□□□□ -2.1
UFD4YKL010C MTR10Q99189 972 aa1.95□□□□□ -2.1
UFD4YKL010C PET9P18239 318 aaKnown RBP1.95□□□□□ -2.1
UFD4YKL010C SEC22P22214 214 aa1.95□□□□□ -2.1
UFD4YKL010C CWH43P25618 953 aa1.95□□□□□ -2.1
UFD4YKL010C YEF1P32622 495 aa1.95□□□□□ -2.1
UFD4YKL010C TIM12P32830 109 aa1.95□□□□□ -2.1
UFD4YKL010C MAL32P38158 584 aa1.95□□□□□ -2.1
UFD4YKL010C LNP1P38878 278 aa1.95□□□□□ -2.1
UFD4YKL010C GDI1P39958 451 aaKnown RBP1.95□□□□□ -2.1
UFD4YKL010C SWM2P40342 146 aa1.95□□□□□ -2.1
UFD4YKL010C DPB11P47027 764 aaPredicted RBP1.95□□□□□ -2.1
UFD4YKL010C LYS20P48570 428 aaKnown RBP1.95□□□□□ -2.1
UFD4YKL010C MTM1P53320 366 aa1.95□□□□□ -2.1
UFD4YKL010C MAL12P53341 584 aa1.95□□□□□ -2.1
UFD4YKL010C PGA1P53896 198 aa1.95□□□□□ -2.1
UFD4YKL010C INN1P53901 409 aa1.95□□□□□ -2.1
UFD4YKL010C NCE101Q02820 53 aa1.95□□□□□ -2.1
UFD4YKL010C MGR3Q04472 501 aa1.95□□□□□ -2.1
UFD4YKL010C YLR036CQ07986 203 aa1.95□□□□□ -2.1
UFD4YKL010C BRX1Q08235 291 aaKnown RBP1.95□□□□□ -2.1
UFD4YKL010C LYS21Q12122 440 aaKnown RBP1.95□□□□□ -2.1
UFD4YKL010C YLR118CQ12354 227 aa1.95□□□□□ -2.1
UFD4YKL010C AIM45Q12480 344 aaKnown RBP1.95□□□□□ -2.1
UFD4YKL010C YPR064WQ12492 139 aa1.95□□□□□ -2.1
UFD4YKL010C PDA1P16387 420 aaKnown RBP1.94□□□□□ -2.1
UFD4YKL010C PUT3P25502 979 aaPredicted RBP1.94□□□□□ -2.1
UFD4YKL010C YPT7P32939 208 aa1.94□□□□□ -2.1
UFD4YKL010C PAD1P33751 242 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1 RIP-Chip
UFD4YKL010C PEX32P38292 413 aa1.94□□□□□ -2.1
UFD4YKL010C HTD2P38790 280 aaKnown RBP1.94□□□□□ -2.1
UFD4YKL010C LSM5P40089 93 aaKnown RBP1.94□□□□□ -2.1
UFD4YKL010C PUG1P40100 303 aa1.94□□□□□ -2.1
UFD4YKL010C YIL166CP40445 542 aa1.94□□□□□ -2.1
UFD4YKL010C CDH1P53197 566 aa1.94□□□□□ -2.1
UFD4YKL010C YGR066CP53242 292 aa1.94□□□□□ -2.1
UFD4YKL010C ASM4Q05166 528 aa1.94□□□□□ -2.1
UFD4YKL010C TAZ1Q06510 381 aa1.94□□□□□ -2.1
UFD4YKL010C SKI7Q08491 747 aaPredicted RBP1.94□□□□□ -2.1
UFD4YKL010C FDH1Q08911 376 aa1.94□□□□□ -2.1
UFD4YKL010C RLM1Q12224 676 aa1.94□□□□□ -2.1
UFD4YKL010C CDC9P04819 755 aa1.94□□□□□ -2.1
UFD4YKL010C OPI3P05375 206 aa1.94□□□□□ -2.1
UFD4YKL010C MET2P08465 486 aa1.94□□□□□ -2.1
UFD4YKL010C PEX4P29340 183 aa1.94□□□□□ -2.1
UFD4YKL010C SPS18P32572 300 aa1.94□□□□□ -2.1
UFD4YKL010C SKN1P33336 771 aa1.94□□□□□ -2.1
UFD4YKL010C WBP1P33767 430 aaKnown RBP1.94□□□□□ -2.1
UFD4YKL010C GPI16P38875 610 aa1.94□□□□□ -2.1
UFD4YKL010C MBP1P39678 833 aa1.94□□□□□ -2.1
UFD4YKL010C AIM2P39721 246 aa1.94□□□□□ -2.1
UFD4YKL010C SPC25P40014 221 aa1.94□□□□□ -2.1
UFD4YKL010C YIL086CP40503 102 aa1.94□□□□□ -2.1
UFD4YKL010C OYE3P41816 400 aaPredicted RBP1.94□□□□□ -2.1
UFD4YKL010C HXT16P47185 567 aa1.94□□□□□ -2.1
UFD4YKL010C RPS12P48589 143 aaKnown RBP1.94□□□□□ -2.1
UFD4YKL010C COQ5P49017 307 aa1.94□□□□□ -2.1
UFD4YKL010C TOS2P50078 622 aa1.94□□□□□ -2.1
UFD4YKL010C SUT1P53032 299 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms