RNA–Protein interactions for RNA: YJL134W

LCB3, Transcript of Long-chain base-1-phosphate phosphatase, yeastyeast

Gene LCB3, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB3YJL134W YDL177CQ12257 170 aa5.73□□□□□ -1.49
LCB3YJL134W RTN2Q12443 393 aa5.73□□□□□ -1.49
LCB3YJL134W DFG16Q99234 619 aa5.73□□□□□ -1.49
LCB3YJL134W IRA1P18963 3092 aa5.73□□□□□ -1.49
LCB3YJL134W YSF3P0C074 85 aaPredicted RBP5.72□□□□□ -1.49
LCB3YJL134W RPL20AP0CX23 172 aaKnown RBP5.72□□□□□ -1.49
LCB3YJL134W RPL20BP0CX24 172 aaPredicted RBP5.72□□□□□ -1.49
LCB3YJL134W PRE7P23724 241 aaKnown RBP5.72□□□□□ -1.49
LCB3YJL134W EXG1P23776 448 aaKnown RBP5.72□□□□□ -1.49
LCB3YJL134W YCL002CP25565 263 aa5.72□□□□□ -1.49
LCB3YJL134W FUN26P31381 517 aa5.72□□□□□ -1.49
LCB3YJL134W ECT1P33412 323 aa5.72□□□□□ -1.49
LCB3YJL134W SHE2P36068 246 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
LCB3YJL134W IFA38P38286 347 aa5.72□□□□□ -1.49
LCB3YJL134W UME6P39001 836 aa5.72□□□□□ -1.49
LCB3YJL134W VPS52P39904 641 aa5.72□□□□□ -1.49
LCB3YJL134W SDP1P40479 209 aa5.72□□□□□ -1.49
LCB3YJL134W ICE2P40499 491 aa5.72□□□□□ -1.49
LCB3YJL134W YIL086CP40503 102 aa5.72□□□□□ -1.49
LCB3YJL134W CFD1P40558 293 aa5.72□□□□□ -1.49
LCB3YJL134W ALK1P43633 760 aaKnown RBP5.72□□□□□ -1.49
LCB3YJL134W IRC18P47056 224 aa5.72□□□□□ -1.49
LCB3YJL134W YGL235WP53071 178 aa5.72□□□□□ -1.49
LCB3YJL134W YGR067CP53243 804 aa5.72□□□□□ -1.49
LCB3YJL134W VOA1P53262 265 aa5.72□□□□□ -1.49
LCB3YJL134W SNP1Q00916 300 aaPredicted RBP5.72□□□□□ -1.49
LCB3YJL134W MRPL13Q02204 264 aa5.72□□□□□ -1.49
LCB3YJL134W NCE101Q02820 53 aa5.72□□□□□ -1.49
LCB3YJL134W PFA5Q03289 374 aa5.72□□□□□ -1.49
LCB3YJL134W YPR127WQ06494 345 aa5.72□□□□□ -1.49
LCB3YJL134W TSR2Q06672 205 aaKnown RBP5.72□□□□□ -1.49
LCB3YJL134W BSC6Q08280 497 aa5.72□□□□□ -1.49
LCB3YJL134W GUP2Q08929 609 aa5.72□□□□□ -1.49
LCB3YJL134W ENV7Q12003 364 aa5.72□□□□□ -1.49
LCB3YJL134W NPC2Q12408 173 aa5.72□□□□□ -1.49
LCB3YJL134W FRE6Q12473 712 aa5.72□□□□□ -1.49
LCB3YJL134W YLR099W-AQ3E798 87 aa5.72□□□□□ -1.49
LCB3YJL134W BAR1P12630 587 aa5.71□□□□□ -1.5
LCB3YJL134W YPK2P18961 677 aa5.71□□□□□ -1.5
LCB3YJL134W RPA135P22138 1203 aaKnown RBP5.71□□□□□ -1.5
LCB3YJL134W YCR006CP25350 157 aa5.71□□□□□ -1.5
LCB3YJL134W PRE2P30656 287 aaKnown RBP5.71□□□□□ -1.5
LCB3YJL134W HOM6P31116 359 aaKnown RBP5.71□□□□□ -1.5
LCB3YJL134W NIC96P34077 839 aa5.71□□□□□ -1.5
LCB3YJL134W TAF14P35189 244 aa5.71□□□□□ -1.5
LCB3YJL134W TMA19P35691 167 aaKnown RBP5.71□□□□□ -1.5
LCB3YJL134W THI2P38141 450 aa5.71□□□□□ -1.5
LCB3YJL134W PAU24P38155 120 aa5.71□□□□□ -1.5
LCB3YJL134W PHO90P39535 881 aa5.71□□□□□ -1.5
LCB3YJL134W YIL152WP40455 235 aa5.71□□□□□ -1.5
LCB3YJL134W HIS6P40545 261 aa5.71□□□□□ -1.5
LCB3YJL134W PAM16P42949 149 aa5.71□□□□□ -1.5
LCB3YJL134W SFH5P47008 294 aa5.71□□□□□ -1.5
LCB3YJL134W IMO32P53219 342 aa5.71□□□□□ -1.5
LCB3YJL134W FMP40Q08968 688 aaPredicted RBP5.71□□□□□ -1.5
LCB3YJL134W HSP42Q12329 375 aa5.71□□□□□ -1.5
LCB3YJL134W SCM3Q12334 223 aa5.71□□□□□ -1.5
LCB3YJL134W YPR1Q12458 312 aa5.71□□□□□ -1.5
LCB3YJL134W SKM1Q12469 655 aa5.71□□□□□ -1.5
LCB3YJL134W RPL6BP05739 176 aaKnown RBP5.7□□□□□ -1.5
LCB3YJL134W HMG1P12683 1054 aa5.7□□□□□ -1.5
LCB3YJL134W STE12P13574 688 aa5.7□□□□□ -1.5
LCB3YJL134W NUP1P20676 1076 aa5.7□□□□□ -1.5
LCB3YJL134W PUT3P25502 979 aaPredicted RBP5.7□□□□□ -1.5
LCB3YJL134W ACH1P32316 526 aa5.7□□□□□ -1.5
LCB3YJL134W HYM1P32464 399 aa5.7□□□□□ -1.5
LCB3YJL134W VPS17P32913 551 aa5.7□□□□□ -1.5
LCB3YJL134W YKL071WP36086 256 aa5.7□□□□□ -1.5
LCB3YJL134W CHK1P38147 527 aa5.7□□□□□ -1.5
LCB3YJL134W MAL32P38158 584 aa5.7□□□□□ -1.5
LCB3YJL134W SKN7P38889 622 aa5.7□□□□□ -1.5
LCB3YJL134W FET3P38993 636 aa5.7□□□□□ -1.5
LCB3YJL134W YKE4P40544 346 aa5.7□□□□□ -1.5
LCB3YJL134W GZF3P42944 551 aaKnown RBP5.7□□□□□ -1.5
LCB3YJL134W DIE2P50076 525 aa5.7□□□□□ -1.5
LCB3YJL134W PMT5P52867 743 aa5.7□□□□□ -1.5
LCB3YJL134W TPN1P53099 579 aa5.7□□□□□ -1.5
LCB3YJL134W ERV29P53337 310 aa5.7□□□□□ -1.5
LCB3YJL134W MAL12P53341 584 aa5.7□□□□□ -1.5
LCB3YJL134W OGG1P53397 376 aaPredicted RBP5.7□□□□□ -1.5
LCB3YJL134W YLR460CP54007 376 aa5.7□□□□□ -1.5
LCB3YJL134W NUP116Q02630 1113 aa5.7□□□□□ -1.5
LCB3YJL134W MSS11Q03825 758 aa5.7□□□□□ -1.5
LCB3YJL134W TAZ1Q06510 381 aa5.7□□□□□ -1.5
LCB3YJL134W YOR283WQ12040 230 aaKnown RBP5.7□□□□□ -1.5
LCB3YJL134W YDL109CQ12103 647 aa5.7□□□□□ -1.5
LCB3YJL134W TIR4Q12218 487 aaPredicted RBP5.7□□□□□ -1.5
LCB3YJL134W QCR7P00128 127 aa5.69□□□□□ -1.5
LCB3YJL134W RPS18AP0CX55 146 aaKnown RBP5.69□□□□□ -1.5
LCB3YJL134W RPS18BP0CX56 146 aaPredicted RBP5.69□□□□□ -1.5
LCB3YJL134W BOS1P25385 244 aa5.69□□□□□ -1.5
LCB3YJL134W FUN19P28003 413 aaPredicted RBP5.69□□□□□ -1.5
LCB3YJL134W ERG9P29704 444 aa5.69□□□□□ -1.5
LCB3YJL134W MDH3P32419 343 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
LCB3YJL134W DOA4P32571 926 aa5.69□□□□□ -1.5
LCB3YJL134W SLC1P33333 303 aa5.69□□□□□ -1.5
LCB3YJL134W HIS7P33734 552 aaKnown RBP5.69□□□□□ -1.5
LCB3YJL134W MTH1P35198 433 aa5.69□□□□□ -1.5
LCB3YJL134W GPX1P36014 167 aa5.69□□□□□ -1.5
LCB3YJL134W CCZ1P38273 704 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms