RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C SWD2P36104 329 aaPredicted RBP2.55□□□□□ -2
TCD1YHR003C MRX3P38172 270 aa2.55□□□□□ -2
TCD1YHR003C IST2P38250 946 aa2.55□□□□□ -2
TCD1YHR003C SDS24P38314 527 aa2.55□□□□□ -2
TCD1YHR003C URA8P38627 578 aaPredicted RBP2.55□□□□□ -2
TCD1YHR003C FHL1P39521 936 aa2.55□□□□□ -2
TCD1YHR003C SEC72P39742 193 aaKnown RBP2.55□□□□□ -2
TCD1YHR003C COA1P40452 197 aa2.55□□□□□ -2
TCD1YHR003C ERG10P41338 398 aaKnown RBP2.55□□□□□ -2
TCD1YHR003C HMS2P47175 358 aa2.55□□□□□ -2
TCD1YHR003C SSN8P47821 323 aa2.55□□□□□ -2
TCD1YHR003C LST7P53237 242 aa2.55□□□□□ -2
TCD1YHR003C PXR1P53335 271 aaPredicted RBP2.55□□□□□ -2
TCD1YHR003C YPL077CQ02831 240 aa2.55□□□□□ -2
TCD1YHR003C SLD5Q03406 294 aa2.55□□□□□ -2
TCD1YHR003C DCR2Q05924 578 aa2.55□□□□□ -2
TCD1YHR003C BNA5Q05979 453 aa2.55□□□□□ -2
TCD1YHR003C ASA1Q06822 443 aa2.55□□□□□ -2
TCD1YHR003C TLG2Q08144 397 aa2.55□□□□□ -2
TCD1YHR003C SGT1Q08446 395 aa2.55□□□□□ -2
TCD1YHR003C ALE1Q08548 619 aa2.55□□□□□ -2
TCD1YHR003C RSA1Q08932 381 aa2.55□□□□□ -2
TCD1YHR003C CSM4Q08955 156 aa2.55□□□□□ -2
TCD1YHR003C SRL2Q12020 392 aa2.55□□□□□ -2
TCD1YHR003C RKM5Q12367 367 aa2.55□□□□□ -2
TCD1YHR003C AI5_BETAQ9ZZX0 354 aa2.55□□□□□ -2
TCD1YHR003C LYS2P07702 1392 aa2.54□□□□□ -2
TCD1YHR003C TPK3P05986 398 aa2.54□□□□□ -2
TCD1YHR003C YBR121C-AP0C5L4 52 aa2.54□□□□□ -2
TCD1YHR003C RPL35AP0CX84 120 aaKnown RBP2.54□□□□□ -2
TCD1YHR003C RPL35BP0CX85 120 aaKnown RBP2.54□□□□□ -2
TCD1YHR003C MRP1P10662 321 aaKnown RBP2.54□□□□□ -2
TCD1YHR003C REV1P12689 985 aa2.54□□□□□ -2
TCD1YHR003C SPO12P17123 173 aa2.54□□□□□ -2
TCD1YHR003C MCK1P21965 375 aaKnown RBP2.54□□□□□ -2
TCD1YHR003C LSB5P25369 354 aa2.54□□□□□ -2
TCD1YHR003C POP5P28005 173 aa2.54□□□□□ -2
TCD1YHR003C ATS1P31386 333 aa2.54□□□□□ -2
TCD1YHR003C MKK1P32490 508 aa2.54□□□□□ -2
TCD1YHR003C COX13P32799 129 aa2.54□□□□□ -2
TCD1YHR003C UBC6P33296 250 aaPredicted RBP2.54□□□□□ -2
TCD1YHR003C VPS21P36017 210 aaKnown RBP2.54□□□□□ -2
TCD1YHR003C CBT1P36038 271 aaPredicted RBP2.54□□□□□ -2
TCD1YHR003C MAK5P38112 773 aaPredicted RBP2.54□□□□□ -2
TCD1YHR003C RCK2P38623 610 aa2.54□□□□□ -2
TCD1YHR003C OSH3P38713 996 aaKnown RBP2.54□□□□□ -2
TCD1YHR003C ATG7P38862 630 aa2.54□□□□□ -2
TCD1YHR003C FAA2P39518 744 aa2.54□□□□□ -2
TCD1YHR003C RBG1P39729 369 aa2.54□□□□□ -2
TCD1YHR003C ISC1P40015 477 aaKnown RBP2.54□□□□□ -2
TCD1YHR003C ERG28P40030 148 aa2.54□□□□□ -2
TCD1YHR003C THO1P40040 218 aaKnown RBP2.54□□□□□ -2
TCD1YHR003C DDI1P40087 428 aa2.54□□□□□ -2
TCD1YHR003C YIL001WP40560 513 aa2.54□□□□□ -2
TCD1YHR003C RPR2P40571 144 aa2.54□□□□□ -2
TCD1YHR003C YFL040WP43562 540 aa2.54□□□□□ -2
TCD1YHR003C KEG1P43614 200 aa2.54□□□□□ -2
TCD1YHR003C HOC1P47124 396 aa2.54□□□□□ -2
TCD1YHR003C AIM24P47127 394 aa2.54□□□□□ -2
TCD1YHR003C TIS11P47977 285 aa2.54□□□□□ -2
TCD1YHR003C AZR1P50080 613 aa2.54□□□□□ -2
TCD1YHR003C YIP1P53039 248 aa2.54□□□□□ -2
TCD1YHR003C LSG1P53145 640 aaKnown RBP2.54□□□□□ -2
TCD1YHR003C PCP1P53259 346 aa2.54□□□□□ -2
TCD1YHR003C BOR1P53838 576 aa2.54□□□□□ -2
TCD1YHR003C SKI8Q02793 397 aaPredicted RBP2.54□□□□□ -2
TCD1YHR003C RRP17Q04031 235 aaPredicted RBP2.54□□□□□ -2
TCD1YHR003C ATG17Q06410 417 aa2.54□□□□□ -2
TCD1YHR003C YRA1Q12159 226 aaKnown RBP2.54□□□□□ -2
TCD1YHR003C YOP1Q12402 180 aa2.54□□□□□ -2
TCD1YHR003C SNF8Q12483 233 aa2.54□□□□□ -2
TCD1YHR003C YKL183C-AQ3E765 70 aa2.54□□□□□ -2
TCD1YHR003C PRP8P33334 2413 aaKnown RBP2.54□□□□□ -2
TCD1YHR003C QCR7P00128 127 aa2.53□□□□□ -2
TCD1YHR003C PAB1P04147 577 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
TCD1YHR003C AMD1P15274 810 aaKnown RBP2.53□□□□□ -2
TCD1YHR003C CBF1P17106 351 aa2.53□□□□□ -2
TCD1YHR003C CKA2P19454 339 aa2.53□□□□□ -2
TCD1YHR003C YMR31P19955 123 aa2.53□□□□□ -2
TCD1YHR003C ITR2P30606 609 aa2.53□□□□□ -2
TCD1YHR003C CSE1P33307 960 aa2.53□□□□□ -2
TCD1YHR003C YKL187CP34231 750 aa2.53□□□□□ -2
TCD1YHR003C TAF14P35189 244 aa2.53□□□□□ -2
TCD1YHR003C RSM22P36056 628 aa2.53□□□□□ -2
TCD1YHR003C MCR1P36060 302 aaKnown RBP2.53□□□□□ -2
TCD1YHR003C AVT5P38176 459 aa2.53□□□□□ -2
TCD1YHR003C PRS2P38620 318 aaKnown RBP2.53□□□□□ -2
TCD1YHR003C YHR035WP38769 630 aa2.53□□□□□ -2
TCD1YHR003C VPS52P39904 641 aa2.53□□□□□ -2
TCD1YHR003C HAT2P39984 401 aa2.53□□□□□ -2
TCD1YHR003C SIM1P40472 476 aa2.53□□□□□ -2
TCD1YHR003C TMA22P47089 198 aaPredicted RBP2.53□□□□□ -2
TCD1YHR003C CWC23P52868 283 aaPredicted RBP2.53□□□□□ -2
TCD1YHR003C YGR067CP53243 804 aa2.53□□□□□ -2
TCD1YHR003C SSU72P53538 206 aaPredicted RBP2.53□□□□□ -2
TCD1YHR003C YNR048WP53740 393 aa2.53□□□□□ -2
TCD1YHR003C FRE4P53746 719 aa2.53□□□□□ -2
TCD1YHR003C HER2Q03557 464 aa2.53□□□□□ -2
TCD1YHR003C BET5Q03630 159 aa2.53□□□□□ -2
TCD1YHR003C FAR8Q05040 523 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms