RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	MRPL6	P32904	214 aa		2.09	□□□□□ -2.07
SPO11	YHL022C	CAB3	P36076	571 aa		2.09	□□□□□ -2.07
SPO11	YHL022C	OSH6	Q02201	448 aa		2.09	□□□□□ -2.07
SPO11	YHL022C	ARC18	Q05933	178 aa	Known RBP	2.09	□□□□□ -2.07
SPO11	YHL022C	YPL278C	Q08990	100 aa		2.09	□□□□□ -2.07
SPO11	YHL022C	PSY3	Q12318	242 aa		2.09	□□□□□ -2.07
SPO11	YHL022C	PFK27	Q12471	397 aa	Predicted RBP	2.09	□□□□□ -2.07
SPO11	YHL022C	LAG2	Q92325	660 aa		2.09	□□□□□ -2.07
SPO11	YHL022C	RNR2	P09938	399 aa	Known RBP	2.08	□□□□□ -2.08
SPO11	YHL022C	VPS1	P21576	704 aa	Known RBP	2.08	□□□□□ -2.08
SPO11	YHL022C	LIN1	P38852	340 aa	Predicted RBP	2.08	□□□□□ -2.08
SPO11	YHL022C	YIL012W	P40551	113 aa		2.08	□□□□□ -2.08
SPO11	YHL022C	PDR16	P53860	351 aa	Known RBP	2.08	□□□□□ -2.08
SPO11	YHL022C	IRC4	Q03036	179 aa		2.08	□□□□□ -2.08
SPO11	YHL022C	RPL18A	P0CX49	186 aa	Known RBP	2.07	□□□□□ -2.08
SPO11	YHL022C	RPL18B	P0CX50	186 aa	Known RBP	2.07	□□□□□ -2.08
SPO11	YHL022C	IFM1	P25038	676 aa		2.07	□□□□□ -2.08
SPO11	YHL022C	YEL043W	P32618	956 aa		2.07	□□□□□ -2.08
SPO11	YHL022C	GCG1	P32656	232 aa	Known RBP	2.07	□□□□□ -2.08
SPO11	YHL022C	INA22	P40576	216 aa		2.07	□□□□□ -2.08
SPO11	YHL022C	SNX41	Q04053	625 aa		2.07	□□□□□ -2.08
SPO11	YHL022C	ZWF1	P11412	505 aa	Known RBP	2.06	□□□□□ -2.08
SPO11	YHL022C	YHR035W	P38769	630 aa		2.06	□□□□□ -2.08
SPO11	YHL022C	YFL064C	P43540	174 aa		2.06	□□□□□ -2.08
SPO11	YHL022C	RSM27	P53305	110 aa		2.06	□□□□□ -2.08
SPO11	YHL022C	TIM22	Q12328	207 aa		2.06	□□□□□ -2.08
SPO11	YHL022C	DCP1	Q12517	231 aa	Predicted RBP	2.06	□□□□□ -2.08
SPO11	YHL022C	CDC13	P32797	924 aa	Known RBP	2.05	□□□□□ -2.08
SPO11	YHL022C	YKL162C	P36052	402 aa		2.05	□□□□□ -2.08
SPO11	YHL022C	SYS1	P41544	203 aa		2.05	□□□□□ -2.08
SPO11	YHL022C	PIR5	P46999	287 aa		2.05	□□□□□ -2.08
SPO11	YHL022C	YLR446W	Q06204	433 aa		2.05	□□□□□ -2.08
SPO11	YHL022C	PRR2	Q12310	699 aa		2.05	□□□□□ -2.08
SPO11	YHL022C	UTP23	Q12339	254 aa	Known RBP	2.05	□□□□□ -2.08
SPO11	YHL022C	ZRT1	P32804	376 aa		2.04	□□□□□ -2.08
SPO11	YHL022C	MCH2	P36032	473 aa		2.04	□□□□□ -2.08
SPO11	YHL022C	MRPL3	P36516	390 aa		2.04	□□□□□ -2.08
SPO11	YHL022C	MIG2	P53035	382 aa		2.04	□□□□□ -2.08
SPO11	YHL022C	OKP1	P53298	406 aa		2.04	□□□□□ -2.08
SPO11	YHL022C	YGR266W	P53326	701 aa		2.04	□□□□□ -2.08
SPO11	YHL022C	SSU72	P53538	206 aa	Predicted RBP	2.04	□□□□□ -2.08
SPO11	YHL022C	STE23	Q06010	1027 aa		2.04	□□□□□ -2.08
SPO11	YHL022C	YOR283W	Q12040	230 aa	Known RBP	2.04	□□□□□ -2.08
SPO11	YHL022C	BEM2	P39960	2167 aa	Known RBP	2.03	□□□□□ -2.08
SPO11	YHL022C	GAL3	P13045	520 aa		2.03	□□□□□ -2.08
SPO11	YHL022C	CLB6	P32943	380 aa		2.03	□□□□□ -2.08
SPO11	YHL022C	YPC1	P38298	316 aa		2.03	□□□□□ -2.08
SPO11	YHL022C	NAS2	P40555	220 aa		2.03	□□□□□ -2.08
SPO11	YHL022C	PRP24	P49960	444 aa	Known RBP	2.03	□□□□□ -2.08
SPO11	YHL022C	ALG9	P53868	555 aa	Known RBP	2.03	□□□□□ -2.08
SPO11	YHL022C	YDL144C	Q07589	356 aa		2.03	□□□□□ -2.08
SPO11	YHL022C	PHO80	P20052	293 aa		2.02	□□□□□ -2.09
SPO11	YHL022C	TPO5	P36029	618 aa		2.02	□□□□□ -2.09
SPO11	YHL022C	CAJ1	P39101	391 aa		2.02	□□□□□ -2.09
SPO11	YHL022C	AVT6	P40074	448 aa		2.02	□□□□□ -2.09
SPO11	YHL022C	UTP25	P40498	721 aa	Known RBP	2.02	□□□□□ -2.09
SPO11	YHL022C	HIS3	P06633	220 aa		2.01	□□□□□ -2.09
SPO11	YHL022C	IMP1	P28627	190 aa		2.01	□□□□□ -2.09
SPO11	YHL022C	APE4	P38821	490 aa		2.01	□□□□□ -2.09
SPO11	YHL022C	NNT1	Q05874	261 aa		2.01	□□□□□ -2.09
SPO11	YHL022C	RDS3	Q06835	107 aa	Predicted RBP	2.01	□□□□□ -2.09
SPO11	YHL022C	PLB3	Q08108	686 aa		2.01	□□□□□ -2.09
SPO11	YHL022C	RRT12	P25381	491 aa		2	□□□□□ -2.09
SPO11	YHL022C	RPL16B	P26785	198 aa	Known RBP	2	□□□□□ -2.09
SPO11	YHL022C	SMI1	P32566	505 aa		2	□□□□□ -2.09
SPO11	YHL022C	UIP5	P36137	443 aa		2	□□□□□ -2.09
SPO11	YHL022C	TRM7	P38238	310 aa	Known RBP	2	□□□□□ -2.09
SPO11	YHL022C	VAB2	P40003	282 aa		2	□□□□□ -2.09
SPO11	YHL022C	UBC13	P52490	153 aa		2	□□□□□ -2.09
SPO11	YHL022C	NBP1	P52919	319 aa	Predicted RBP	2	□□□□□ -2.09
SPO11	YHL022C	SWC4	P53201	476 aa		2	□□□□□ -2.09
SPO11	YHL022C	TVP15	Q03860	143 aa		2	□□□□□ -2.09
SPO11	YHL022C	IMP3	P32899	183 aa	Predicted RBP	1.99	□□□□□ -2.09
SPO11	YHL022C	KRE29	P40026	464 aa		1.99	□□□□□ -2.09
SPO11	YHL022C	TPN1	P53099	579 aa		1.99	□□□□□ -2.09
SPO11	YHL022C	CGI121	Q03705	181 aa	Known RBP	1.99	□□□□□ -2.09
SPO11	YHL022C	PBP4	Q07362	185 aa	Known RBP	1.99	□□□□□ -2.09
SPO11	YHL022C	SAM4	Q08985	325 aa	Known RBP	1.99	□□□□□ -2.09
SPO11	YHL022C	IZH4	Q99393	312 aa		1.99	□□□□□ -2.09
SPO11	YHL022C	RPL26A	P05743	127 aa	Known RBP	1.98	□□□□□ -2.09
SPO11	YHL022C	MBA1	P38300	278 aa		1.98	□□□□□ -2.09
SPO11	YHL022C	YJR141W	P47172	347 aa	Predicted RBP	1.98	□□□□□ -2.09
SPO11	YHL022C	RPL26B	P53221	127 aa	Known RBP	1.98	□□□□□ -2.09
SPO11	YHL022C	BIO4	P53630	237 aa		1.98	□□□□□ -2.09
SPO11	YHL022C	YMR111C	Q04461	462 aa	Predicted RBP	1.98	□□□□□ -2.09
SPO11	YHL022C	VPS68	Q12016	184 aa		1.98	□□□□□ -2.09
SPO11	YHL022C	TY3A-G	Q12173	290 aa		1.98	□□□□□ -2.09
SPO11	YHL022C	TY3A-I	Q99219	290 aa		1.98	□□□□□ -2.09
SPO11	YHL022C	MSS116	P15424	664 aa	Known RBP	1.97	□□□□□ -2.09
SPO11	YHL022C	OSM1	P21375	501 aa	Known RBP	1.97	□□□□□ -2.09
SPO11	YHL022C	VPH1	P32563	840 aa	Known RBP	1.97	□□□□□ -2.09
SPO11	YHL022C	FET3	P38993	636 aa		1.97	□□□□□ -2.09
SPO11	YHL022C	AIM20	P40451	204 aa		1.97	□□□□□ -2.09
SPO11	YHL022C	DSK2	P48510	373 aa		1.97	□□□□□ -2.09
SPO11	YHL022C	MRS2	Q01926	470 aa		1.97	□□□□□ -2.09
SPO11	YHL022C	YLL007C	Q07799	665 aa		1.97	□□□□□ -2.09
SPO11	YHL022C	ATG5	Q12380	294 aa		1.97	□□□□□ -2.09
SPO11	YHL022C	GAL7	P08431	366 aa		1.96	□□□□□ -2.1
SPO11	YHL022C	TAZ1	Q06510	381 aa		1.96	□□□□□ -2.1
SPO11	YHL022C	APC9	Q12107	265 aa		1.96	□□□□□ -2.1

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms