RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YKL063CP35725 167 aa2.37□□□□□ -2.03
VAB2YEL005C SPO19Q03029 223 aa2.37□□□□□ -2.03
VAB2YEL005C VTI1Q04338 217 aa2.37□□□□□ -2.03
VAB2YEL005C SEC13Q04491 297 aaKnown RBP2.37□□□□□ -2.03
VAB2YEL005C BER1Q06688 274 aaKnown RBP2.37□□□□□ -2.03
VAB2YEL005C ASR1Q06834 288 aa2.37□□□□□ -2.03
VAB2YEL005C MIM1Q08176 113 aa2.37□□□□□ -2.03
VAB2YEL005C POM33Q12164 279 aa2.37□□□□□ -2.03
VAB2YEL005C TRM10Q12400 293 aa2.37□□□□□ -2.03
VAB2YEL005C MRPL23Q12487 163 aaPredicted RBP2.37□□□□□ -2.03
VAB2YEL005C DFM1Q12743 341 aaKnown RBP2.37□□□□□ -2.03
VAB2YEL005C RPC40P07703 335 aaKnown RBP2.36□□□□□ -2.03
VAB2YEL005C RPL31AP0C2H8 113 aaKnown RBP2.36□□□□□ -2.03
VAB2YEL005C CUP2P15315 225 aa2.36□□□□□ -2.03
VAB2YEL005C AST1P35183 429 aa2.36□□□□□ -2.03
VAB2YEL005C EBP2P36049 427 aaKnown RBP2.36□□□□□ -2.03
VAB2YEL005C AIM29P36154 155 aa2.36□□□□□ -2.03
VAB2YEL005C FRM2P37261 193 aa2.36□□□□□ -2.03
VAB2YEL005C HIS2P38635 335 aa2.36□□□□□ -2.03
VAB2YEL005C ASP1P38986 381 aaPredicted RBP2.36□□□□□ -2.03
VAB2YEL005C EDC2P40023 145 aaPredicted RBP2.36□□□□□ -2.03
VAB2YEL005C RRG9P40156 214 aa2.36□□□□□ -2.03
VAB2YEL005C YIL059CP40520 121 aa2.36□□□□□ -2.03
VAB2YEL005C CDC40P40968 455 aaPredicted RBP2.36□□□□□ -2.03
VAB2YEL005C LOC1P43586 204 aaPredicted RBP2.36□□□□□ -2.03
VAB2YEL005C YNL260CP53846 198 aa2.36□□□□□ -2.03
VAB2YEL005C YPL077CQ02831 240 aa2.36□□□□□ -2.03
VAB2YEL005C YLR446WQ06204 433 aa2.36□□□□□ -2.03
VAB2YEL005C GPN3Q06543 272 aa2.36□□□□□ -2.03
VAB2YEL005C YOR292CQ08743 309 aa2.36□□□□□ -2.03
VAB2YEL005C YPL278CQ08990 100 aa2.36□□□□□ -2.03
VAB2YEL005C PRM7Q12459 698 aa2.36□□□□□ -2.03
VAB2YEL005C COX10P21592 462 aa2.35□□□□□ -2.03
VAB2YEL005C IMP1P28627 190 aa2.35□□□□□ -2.03
VAB2YEL005C PEX18P38855 283 aa2.35□□□□□ -2.03
VAB2YEL005C PFS2P42841 465 aaKnown RBP2.35□□□□□ -2.03
VAB2YEL005C UBC13P52490 153 aa2.35□□□□□ -2.03
VAB2YEL005C BIO4P53630 237 aa2.35□□□□□ -2.03
VAB2YEL005C SMD1Q02260 146 aaPredicted RBP2.35□□□□□ -2.03
VAB2YEL005C YMR209CQ03648 457 aa2.35□□□□□ -2.03
VAB2YEL005C ECM19Q06011 112 aa2.35□□□□□ -2.03
VAB2YEL005C FAB1P34756 2278 aa2.34□□□□□ -2.03
VAB2YEL005C VPS1P21576 704 aaKnown RBP2.34□□□□□ -2.03
VAB2YEL005C RPS0AP32905 252 aaKnown RBP2.34□□□□□ -2.03
VAB2YEL005C TPO5P36029 618 aa2.34□□□□□ -2.03
VAB2YEL005C RPC37P36121 282 aa2.34□□□□□ -2.03
VAB2YEL005C YPC1P38298 316 aa2.34□□□□□ -2.03
VAB2YEL005C KRE29P40026 464 aa2.34□□□□□ -2.03
VAB2YEL005C YIL012WP40551 113 aa2.34□□□□□ -2.03
VAB2YEL005C AGP3P43548 558 aa2.34□□□□□ -2.03
VAB2YEL005C MRX5P47007 382 aa2.34□□□□□ -2.03
VAB2YEL005C GTO1P48239 356 aa2.34□□□□□ -2.03
VAB2YEL005C COG7P53195 279 aa2.34□□□□□ -2.03
VAB2YEL005C CSI1Q04368 295 aa2.34□□□□□ -2.03
VAB2YEL005C ERV41Q04651 352 aa2.34□□□□□ -2.03
VAB2YEL005C BCP1Q06338 283 aa2.34□□□□□ -2.03
VAB2YEL005C YPR195CQ06594 109 aa2.34□□□□□ -2.03
VAB2YEL005C VPH2P32341 215 aa2.33□□□□□ -2.04
VAB2YEL005C GCG1P32656 232 aaKnown RBP2.33□□□□□ -2.04
VAB2YEL005C IMP3P32899 183 aaPredicted RBP2.33□□□□□ -2.04
VAB2YEL005C RRF1P38771 230 aa2.33□□□□□ -2.04
VAB2YEL005C EMC2P47133 292 aaKnown RBP2.33□□□□□ -2.04
VAB2YEL005C PRP24P49960 444 aaKnown RBP2.33□□□□□ -2.04
VAB2YEL005C ZRG17P53735 605 aa2.33□□□□□ -2.04
VAB2YEL005C APJ1P53940 528 aa2.33□□□□□ -2.04
VAB2YEL005C DBP3P20447 523 aaKnown RBP2.32□□□□□ -2.04
VAB2YEL005C YSR3P23501 404 aa2.32□□□□□ -2.04
VAB2YEL005C GPX1P36014 167 aa2.32□□□□□ -2.04
VAB2YEL005C MRPL3P36516 390 aa2.32□□□□□ -2.04
VAB2YEL005C GDS1P41913 522 aa2.32□□□□□ -2.04
VAB2YEL005C GCD14P46959 383 aaPredicted RBP2.32□□□□□ -2.04
VAB2YEL005C PEX30Q06169 523 aa2.32□□□□□ -2.04
VAB2YEL005C DIB1Q06819 143 aaPredicted RBP2.32□□□□□ -2.04
VAB2YEL005C ATP6P00854 259 aa2.31□□□□□ -2.04
VAB2YEL005C TFS1P14306 219 aa2.31□□□□□ -2.04
VAB2YEL005C HPR1P17629 752 aaKnown RBP2.31□□□□□ -2.04
VAB2YEL005C RPB9P27999 122 aa2.31□□□□□ -2.04
VAB2YEL005C VPS45P38932 577 aa2.31□□□□□ -2.04
VAB2YEL005C YFL064CP43540 174 aa2.31□□□□□ -2.04
VAB2YEL005C BUD13P46947 266 aaPredicted RBP2.31□□□□□ -2.04
VAB2YEL005C YGL185CP53100 379 aa2.31□□□□□ -2.04
VAB2YEL005C MND1P53102 219 aa2.31□□□□□ -2.04
VAB2YEL005C LIF1P53150 421 aa2.31□□□□□ -2.04
VAB2YEL005C CPD1P53314 239 aa2.31□□□□□ -2.04
VAB2YEL005C ERV25P54837 211 aaKnown RBP2.31□□□□□ -2.04
VAB2YEL005C DPP1Q05521 289 aa2.31□□□□□ -2.04
VAB2YEL005C YPR063CQ12160 140 aa2.31□□□□□ -2.04
VAB2YEL005C IES3Q12345 250 aa2.31□□□□□ -2.04
VAB2YEL005C DAL81P21657 970 aa2.3□□□□□ -2.04
VAB2YEL005C SUA5P32579 426 aa2.3□□□□□ -2.04
VAB2YEL005C SPT4P32914 102 aaPredicted RBP2.3□□□□□ -2.04
VAB2YEL005C SEN34P39707 275 aa2.3□□□□□ -2.04
VAB2YEL005C ECO1P43605 281 aa2.3□□□□□ -2.04
VAB2YEL005C MPP10P47083 593 aaKnown RBP2.3□□□□□ -2.04
VAB2YEL005C YPT32P51996 222 aaKnown RBP2.3□□□□□ -2.04
VAB2YEL005C RSM27P53305 110 aa2.3□□□□□ -2.04
VAB2YEL005C YNL040WP53960 456 aaPredicted RBP2.3□□□□□ -2.04
VAB2YEL005C YDR114CQ04597 100 aa2.3□□□□□ -2.04
VAB2YEL005C YPS3Q12303 508 aa2.3□□□□□ -2.04
VAB2YEL005C PRP46Q12417 451 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms