RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C YNR062CP53748 327 aa3.57□□□□□ -1.84
PRP11YDL043C YML122CQ03207 126 aa3.57□□□□□ -1.84
PRP11YDL043C IZH1Q03419 316 aa3.57□□□□□ -1.84
PRP11YDL043C RIM13Q03792 727 aa3.57□□□□□ -1.84
PRP11YDL043C GMC1Q04399 608 aa3.57□□□□□ -1.84
PRP11YDL043C BUR2Q05949 395 aa3.57□□□□□ -1.84
PRP11YDL043C SOR2Q07786 357 aa3.57□□□□□ -1.84
PRP11YDL043C YPL199CQ08954 240 aa3.57□□□□□ -1.84
PRP11YDL043C FCF2Q12035 217 aaPredicted RBP3.57□□□□□ -1.84
PRP11YDL043C YOL107WQ12239 342 aa3.57□□□□□ -1.84
PRP11YDL043C PET20Q99373 253 aa3.57□□□□□ -1.84
PRP11YDL043C MYO2P19524 1574 aaKnown RBP3.56□□□□□ -1.84
PRP11YDL043C KRE5P22023 1365 aa3.56□□□□□ -1.84
PRP11YDL043C POM152P39685 1337 aa3.56□□□□□ -1.84
PRP11YDL043C IMA3P0CW40 589 aa3.56□□□□□ -1.84
PRP11YDL043C IMA4P0CW41 589 aa3.56□□□□□ -1.84
PRP11YDL043C PET54P10834 293 aa3.56□□□□□ -1.84
PRP11YDL043C PRE1P22141 198 aaKnown RBP3.56□□□□□ -1.84
PRP11YDL043C BUB3P26449 341 aa3.56□□□□□ -1.84
PRP11YDL043C PPA2P28239 310 aa3.56□□□□□ -1.84
PRP11YDL043C NDC1P32500 655 aa3.56□□□□□ -1.84
PRP11YDL043C TAF14P35189 244 aa3.56□□□□□ -1.84
PRP11YDL043C MCH2P36032 473 aa3.56□□□□□ -1.84
PRP11YDL043C DER1P38307 211 aa3.56□□□□□ -1.84
PRP11YDL043C YBR220CP38318 560 aa3.56□□□□□ -1.84
PRP11YDL043C POP4P38336 279 aa3.56□□□□□ -1.84
PRP11YDL043C FLO5P38894 1075 aa3.56□□□□□ -1.84
PRP11YDL043C PRP39P39682 629 aaKnown RBP3.56□□□□□ -1.84
PRP11YDL043C GDS1P41913 522 aa3.56□□□□□ -1.84
PRP11YDL043C SCD6P45978 349 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
PRP11YDL043C PHO86P46956 311 aa3.56□□□□□ -1.84
PRP11YDL043C YJR079WP47126 109 aa3.56□□□□□ -1.84
PRP11YDL043C BIO3P50277 480 aa3.56□□□□□ -1.84
PRP11YDL043C RTT102P53330 157 aa3.56□□□□□ -1.84
PRP11YDL043C MAL13P53338 473 aa3.56□□□□□ -1.84
PRP11YDL043C AQR1P53943 586 aa3.56□□□□□ -1.84
PRP11YDL043C ELP3Q02908 557 aaKnown RBP3.56□□□□□ -1.84
PRP11YDL043C YDR541CQ03049 344 aa3.56□□□□□ -1.84
PRP11YDL043C YDR387CQ04162 555 aa3.56□□□□□ -1.84
PRP11YDL043C SDH7Q04401 133 aa3.56□□□□□ -1.84
PRP11YDL043C MYO5Q04439 1219 aaKnown RBP3.56□□□□□ -1.84
PRP11YDL043C BNA5Q05979 453 aa3.56□□□□□ -1.84
PRP11YDL043C RRG8Q06109 277 aa3.56□□□□□ -1.84
PRP11YDL043C YLR177WQ06251 628 aa3.56□□□□□ -1.84
PRP11YDL043C CTS2Q06350 511 aa3.56□□□□□ -1.84
PRP11YDL043C BER1Q06688 274 aaKnown RBP3.56□□□□□ -1.84
PRP11YDL043C HRD1Q08109 551 aa3.56□□□□□ -1.84
PRP11YDL043C THI20Q08224 551 aa3.56□□□□□ -1.84
PRP11YDL043C IMA2Q08295 589 aa3.56□□□□□ -1.84
PRP11YDL043C TMS1Q12116 473 aa3.56□□□□□ -1.84
PRP11YDL043C RKM5Q12367 367 aa3.56□□□□□ -1.84
PRP11YDL043C MRX4Q12467 430 aa3.56□□□□□ -1.84
PRP11YDL043C HAP1P0CE41 1502 aa3.55□□□□□ -1.84
PRP11YDL043C VPS63O13549 108 aa3.55□□□□□ -1.84
PRP11YDL043C CDC33P07260 213 aaKnown RBP3.55□□□□□ -1.84
PRP11YDL043C YER190C-BP0CX94 160 aa3.55□□□□□ -1.84
PRP11YDL043C YEL077W-AP0CX95 160 aa3.55□□□□□ -1.84
PRP11YDL043C YGR296C-BP0CX96 160 aa3.55□□□□□ -1.84
PRP11YDL043C YPL283W-BP0CX97 160 aa3.55□□□□□ -1.84
PRP11YDL043C YPR204C-AP0CX98 160 aa3.55□□□□□ -1.84
PRP11YDL043C MET16P18408 261 aaPredicted RBP3.55□□□□□ -1.84
PRP11YDL043C EXG1P23776 448 aaKnown RBP3.55□□□□□ -1.84
PRP11YDL043C YUR1P26725 428 aa3.55□□□□□ -1.84
PRP11YDL043C UBC8P28263 218 aa3.55□□□□□ -1.84
PRP11YDL043C PRR1P28708 518 aa3.55□□□□□ -1.84
PRP11YDL043C PRO3P32263 286 aaKnown RBP3.55□□□□□ -1.84
PRP11YDL043C HYM1P32464 399 aa3.55□□□□□ -1.84
PRP11YDL043C PTK1P36002 662 aaPredicted RBP3.55□□□□□ -1.84
PRP11YDL043C JEN1P36035 616 aa3.55□□□□□ -1.84
PRP11YDL043C ECM13P38195 257 aa3.55□□□□□ -1.84
PRP11YDL043C YBR062CP38239 180 aa3.55□□□□□ -1.84
PRP11YDL043C ECM8P38246 354 aa3.55□□□□□ -1.84
PRP11YDL043C YPT31P38555 223 aaKnown RBP3.55□□□□□ -1.84
PRP11YDL043C ATG7P38862 630 aa3.55□□□□□ -1.84
PRP11YDL043C NPT1P39683 429 aaKnown RBP3.55□□□□□ -1.84
PRP11YDL043C GAT2P40209 560 aa3.55□□□□□ -1.84
PRP11YDL043C TOS3P43637 560 aa3.55□□□□□ -1.84
PRP11YDL043C GUF1P46943 645 aa3.55□□□□□ -1.84
PRP11YDL043C GPI14P47088 403 aaKnown RBP3.55□□□□□ -1.84
PRP11YDL043C ASN2P49090 572 aaKnown RBP3.55□□□□□ -1.84
PRP11YDL043C SWC4P53201 476 aa3.55□□□□□ -1.84
PRP11YDL043C YIP3P53633 176 aa3.55□□□□□ -1.84
PRP11YDL043C HCH1P53834 153 aa3.55□□□□□ -1.84
PRP11YDL043C YIF1P53845 314 aaKnown RBP3.55□□□□□ -1.84
PRP11YDL043C YNL143CP53908 130 aa3.55□□□□□ -1.84
PRP11YDL043C RHO3Q00245 231 aaKnown RBP3.55□□□□□ -1.84
PRP11YDL043C NUP49Q02199 472 aa3.55□□□□□ -1.84
PRP11YDL043C YPL080CQ02826 108 aa3.55□□□□□ -1.84
PRP11YDL043C MSS11Q03825 758 aa3.55□□□□□ -1.84
PRP11YDL043C PKR1Q03880 122 aaKnown RBP3.55□□□□□ -1.84
PRP11YDL043C AIM33Q04516 312 aa3.55□□□□□ -1.84
PRP11YDL043C GPM2Q12008 311 aa3.55□□□□□ -1.84
PRP11YDL043C ATX2Q12067 313 aa3.55□□□□□ -1.84
PRP11YDL043C BSC1Q12140 328 aa3.55□□□□□ -1.84
PRP11YDL043C YPL150WQ12152 901 aa3.55□□□□□ -1.84
PRP11YDL043C TPT1Q12272 230 aaKnown RBP3.55□□□□□ -1.84
PRP11YDL043C ATP14Q12349 124 aa3.55□□□□□ -1.84
PRP11YDL043C PSF1Q12488 208 aa3.55□□□□□ -1.84
PRP11YDL043C CLN3P13365 580 aa3.54□□□□□ -1.84
PRP11YDL043C EXO70P19658 623 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms