RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W CHA4P43634 648 aa4.31□□□□□ -1.72
VHC1YBR235W YJL163CP46996 555 aa4.31□□□□□ -1.72
VHC1YBR235W RIB4P50861 169 aaPredicted RBP4.31□□□□□ -1.72
VHC1YBR235W PUS6P53294 404 aa4.31□□□□□ -1.72
VHC1YBR235W ASR1Q06834 288 aa4.31□□□□□ -1.72
VHC1YBR235W THI13Q07748 340 aa4.31□□□□□ -1.72
VHC1YBR235W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
VHC1YBR235W RDI1Q12434 202 aa4.31□□□□□ -1.72
VHC1YBR235W RMD5Q12508 421 aa4.31□□□□□ -1.72
VHC1YBR235W CTF3Q12748 733 aa4.31□□□□□ -1.72
VHC1YBR235W RPS25AQ3E792 108 aaPredicted RBP4.31□□□□□ -1.72
VHC1YBR235W HAP3P13434 144 aa4.31□□□□□ -1.72
VHC1YBR235W BUB2P26448 306 aaPredicted RBP4.31□□□□□ -1.72
VHC1YBR235W PHO91P27514 894 aa4.31□□□□□ -1.72
VHC1YBR235W APL3P38065 1025 aa4.31□□□□□ -1.72
VHC1YBR235W YPC1P38298 316 aa4.31□□□□□ -1.72
VHC1YBR235W AME1P38313 324 aa4.31□□□□□ -1.72
VHC1YBR235W MTC4P38335 694 aaKnown RBP4.31□□□□□ -1.72
VHC1YBR235W PRP39P39682 629 aaKnown RBP4.31□□□□□ -1.72
VHC1YBR235W PMT6P42934 759 aa4.31□□□□□ -1.72
VHC1YBR235W RPA43P46669 326 aa4.31□□□□□ -1.72
VHC1YBR235W LCL3P53153 274 aa4.31□□□□□ -1.72
VHC1YBR235W MPC1P53157 130 aaKnown RBP4.31□□□□□ -1.72
VHC1YBR235W TIM21P53220 239 aa4.31□□□□□ -1.72
VHC1YBR235W PRP38Q00723 242 aaPredicted RBP4.31□□□□□ -1.72
VHC1YBR235W CYT2Q00873 224 aa4.31□□□□□ -1.72
VHC1YBR235W CTF19Q02732 369 aa4.31□□□□□ -1.72
VHC1YBR235W OAZ1Q02803 292 aa4.31□□□□□ -1.72
VHC1YBR235W YML096WQ04489 525 aa4.31□□□□□ -1.72
VHC1YBR235W PUS5Q06244 254 aa4.31□□□□□ -1.72
VHC1YBR235W ECM30Q06673 1274 aa4.31□□□□□ -1.72
VHC1YBR235W NUS1Q12063 375 aa4.31□□□□□ -1.72
VHC1YBR235W NBP2Q12163 236 aa4.31□□□□□ -1.72
VHC1YBR235W ATG5Q12380 294 aa4.31□□□□□ -1.72
VHC1YBR235W CPR1P14832 162 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W MDH1P17505 334 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
VHC1YBR235W CDC42P19073 191 aa4.3□□□□□ -1.72
VHC1YBR235W MAK31P23059 88 aa4.3□□□□□ -1.72
VHC1YBR235W YCK2P23292 546 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W TAH1P25638 111 aaPredicted RBP4.3□□□□□ -1.72
VHC1YBR235W CWP1P28319 239 aa4.3□□□□□ -1.72
VHC1YBR235W ZTA1P38230 334 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W ICS2P38284 255 aa4.3□□□□□ -1.72
VHC1YBR235W YHL041WP38730 149 aa4.3□□□□□ -1.72
VHC1YBR235W OSW5P40219 148 aa4.3□□□□□ -1.72
VHC1YBR235W RFC4P40339 323 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W LCB2P40970 561 aa4.3□□□□□ -1.72
VHC1YBR235W ASN2P49090 572 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W YGR151CP53287 111 aa4.3□□□□□ -1.72
VHC1YBR235W TRM44Q02648 567 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W CSM3Q04659 317 aa4.3□□□□□ -1.72
VHC1YBR235W SPR28Q04921 423 aa4.3□□□□□ -1.72
VHC1YBR235W ATG10Q07879 167 aa4.3□□□□□ -1.72
VHC1YBR235W CMR1Q12510 522 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W COX6P00427 148 aa4.3□□□□□ -1.72
VHC1YBR235W AIM17P23180 465 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W NTF2P33331 125 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W ASH1P34233 588 aa4.3□□□□□ -1.72
VHC1YBR235W YHR033WP38690 423 aa4.3□□□□□ -1.72
VHC1YBR235W WSS1P38838 269 aa4.3□□□□□ -1.72
VHC1YBR235W VPS52P39904 641 aa4.3□□□□□ -1.72
VHC1YBR235W YIL067CP40514 678 aa4.3□□□□□ -1.72
VHC1YBR235W FIG4P42837 879 aa4.3□□□□□ -1.72
VHC1YBR235W YJL171CP46992 396 aa4.3□□□□□ -1.72
VHC1YBR235W ASI3P53983 676 aa4.3□□□□□ -1.72
VHC1YBR235W AHA1Q12449 350 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W SAL1D6W196 494 aa4.3□□□□□ -1.72
VHC1YBR235W CAN1P04817 590 aa4.3□□□□□ -1.72
VHC1YBR235W ERS1P17261 260 aa4.3□□□□□ -1.72
VHC1YBR235W ERG6P25087 383 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W UTR2P32623 467 aa4.3□□□□□ -1.72
VHC1YBR235W OMA1P36163 345 aa4.3□□□□□ -1.72
VHC1YBR235W FLR1P38124 548 aa4.3□□□□□ -1.72
VHC1YBR235W ROT2P38138 954 aa4.3□□□□□ -1.72
VHC1YBR235W FIG1P38224 298 aa4.3□□□□□ -1.72
VHC1YBR235W YBR071WP38243 211 aa4.3□□□□□ -1.72
VHC1YBR235W SEC24P40482 926 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W TUB4P53378 473 aa4.3□□□□□ -1.72
VHC1YBR235W DUS1P53759 423 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W GPD1Q00055 391 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W DOT1Q04089 582 aaKnown RBP4.3□□□□□ -1.72
VHC1YBR235W AIM33Q04516 312 aa4.3□□□□□ -1.72
VHC1YBR235W YOL131WQ08270 108 aa4.3□□□□□ -1.72
VHC1YBR235W HAP2P06774 265 aa4.29□□□□□ -1.72
VHC1YBR235W SGA1P08019 549 aa4.29□□□□□ -1.72
VHC1YBR235W RRN10P38204 145 aa4.29□□□□□ -1.72
VHC1YBR235W FLX1P40464 311 aa4.29□□□□□ -1.72
VHC1YBR235W NET1P47035 1189 aa4.29□□□□□ -1.72
VHC1YBR235W ADH6Q04894 360 aaKnown RBP4.29□□□□□ -1.72
VHC1YBR235W YML053CQ04978 212 aa4.29□□□□□ -1.72
VHC1YBR235W ANT1Q06497 328 aa4.29□□□□□ -1.72
VHC1YBR235W THP1Q08231 455 aa4.29□□□□□ -1.72
VHC1YBR235W FCF2Q12035 217 aaPredicted RBP4.29□□□□□ -1.72
VHC1YBR235W RKI1Q12189 258 aa4.29□□□□□ -1.72
VHC1YBR235W YDL085C-AQ3E7B7 68 aaKnown RBP4.29□□□□□ -1.72
VHC1YBR235W ADK1P07170 222 aaKnown RBP4.29□□□□□ -1.72
VHC1YBR235W ATP5P09457 212 aa4.29□□□□□ -1.72
VHC1YBR235W GCY1P14065 312 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
VHC1YBR235W SCL1P21243 252 aaKnown RBP4.29□□□□□ -1.72
VHC1YBR235W HOM6P31116 359 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms