RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 NrlP54846 237 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 9130409I23RikQ3TS87 320 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 TfrcQ62351 763 aaKnown RBP9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cog5Q8C0L8 829 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ola1Q9CZ30 396 aaKnown RBP9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Adssl1P28650 457 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 LRWD1Q8BUI3 648 aaKnown RBP9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Castor1Q9CWQ8 331 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Pabpc6Q9D4E6 643 aaKnown RBP9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Itsn2Q9Z0R6 1659 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rgs12Q8CGE9 1381 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 EgfrQ01279 1210 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Epha2Q03145 977 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Inf2Q0GNC1 1273 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 ScocQ78YZ6 125 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 C8aQ8K182 587 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Polr3eQ9CZT4 710 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 3830403N18RikQ9D6C3 208 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Dnmt1P13864 1620 aaKnown RBP9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Slc6a16A0A1L1SR47 742 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Patl1Q3TC46 770 aaKnown RBP9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ces1eQ64176 562 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ccdc154Q6RUT8 657 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ephb1Q8CBF3 984 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Mtmr1Q9Z2C4 669 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 PtpruB1AUH1 1446 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rap1gapA2ALS5 663 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rab20P35295 233 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tubgcp3P58854 905 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Casc4Q6P2L7 435 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 TwistnbQ78WZ7 330 aaKnown RBP9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Alkbh8Q80Y20 664 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Anapc5Q8BTZ4 740 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Atg16l1Q8C0J2 607 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Agap3Q8VHH5 910 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Habp4Q9JKS5 411 aaKnown RBP9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ap1g2O88512 791 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Alox15P39654 663 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Chp1P61022 195 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Q9D2Q3 444 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tll2Q9WVM6 1012 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Daam1Q8BPM0 1077 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Abtb1Q99LJ2 478 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ifi35Q9D8C4 286 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 GsdmeQ9Z2D3 512 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Syt2P46097 422 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 PrkcbP68404 671 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Parp3Q3ULW8 533 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Dhx40Q6PE54 779 aaKnown RBP9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Zfp512bQ6PHP4 879 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 TxlngQ8BHN1 524 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Prr33Q8C494 260 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Fgd4Q91ZT5 766 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Zfp64Q99KE8 643 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ndc80Q9D0F1 642 aaKnown RBP9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rnf123Q5XPI3 1314 aa9.34□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Mmrn1B2RPV6 1210 aa9.34□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Wbp4Q61048 376 aa9.34□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Krt31Q61765 416 aa9.34□□□□□ -0.92
Ttc28-201ENSMUST00000040111 F13a1Q8BH61 732 aa9.34□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Sfmbt1Q9JMD1 863 aa9.34□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Atp7bQ64446 1462 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tcp11x2A2AEI7 503 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Lrrc63A6H694 637 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cfap221A9Q751 836 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Casp14O89094 257 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Etv6P97360 485 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 4930502E18RikQ14BQ3 236 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Arhgap17Q3UIA2 846 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Paip2bQ91W45 136 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Myh4Q5SX39 1939 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Psmc1P62192 440 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 SpoplQ2M2N2 392 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cyp11b1Q3TG86 501 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Upf3bQ3ULL6 472 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Palm2Q8BR92 376 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Lrrc14Q8VC16 493 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Hip1Q8VD75 1029 aaKnown RBP9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Pqbp1Q91VJ5 263 aaKnown RBP9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Iqsec2Q5DU25 1478 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Actn4P57780 912 aaKnown RBP9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Spink5Q148R4 1017 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Moxd2Q7TT41 619 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Enox1Q8BHR2 643 aaKnown RBP9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ing3Q8VEK6 421 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gpr108Q91WD0 569 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Adam22Q9R1V6 904 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Lgr5Q9Z1P4 907 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Grin2dQ03391 1323 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Kdelc2G5E897 503 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tmtc1Q3UV71 942 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Nudt16Q6P3D0 195 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Anks1bQ8BIZ1 1259 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Twf1Q91YR1 350 aaKnown RBP9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 CltcQ68FD5 1675 aaKnown RBP9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tmem59lQ7TNI2 337 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Serpinb10Q8K1K6 397 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cse1lQ9ERK4 971 aaKnown RBP9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Limd1Q9QXD8 668 aa9.33□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Faf1P54731 649 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms