Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm25239-201ENSMUST00000174915 86 ntBASIC41.5■■■■■ 4.23
NrlP54846 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
NrlP54846 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
NrlP54846 Gm15042-201ENSMUST00000120212 883 ntBASIC36.05■■■■□ 3.36
NrlP54846 Gm24109-201ENSMUST00000175489 103 ntBASIC36.04■■■■□ 3.36
NrlP54846 Gm15045-201ENSMUST00000117359 883 ntBASIC35.2■■■■□ 3.23
NrlP54846 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
NrlP54846 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
NrlP54846 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.06■■■■□ 3.2
NrlP54846 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
NrlP54846 Gm23366-201ENSMUST00000175022 89 ntBASIC34.65■■■■□ 3.14
NrlP54846 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
NrlP54846 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
NrlP54846 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.9■■■■□ 3.02
NrlP54846 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.71■■■□□ 2.99
NrlP54846 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
NrlP54846 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.42■■■□□ 2.94
NrlP54846 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.38■■■□□ 2.93
NrlP54846 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.36■■■□□ 2.93
NrlP54846 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
NrlP54846 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
NrlP54846 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
NrlP54846 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
NrlP54846 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
NrlP54846 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.88■■■□□ 2.85
NrlP54846 Gm25238-201ENSMUST00000174914 89 ntBASIC32.83■■■□□ 2.85
NrlP54846 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
NrlP54846 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.78■■■□□ 2.84
NrlP54846 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
NrlP54846 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NrlP54846 Psd-208ENSMUST00000224556 2034 ntBASIC32.58■■■□□ 2.81
NrlP54846 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.41■■■□□ 2.78
NrlP54846 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
NrlP54846 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
NrlP54846 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.19■■■□□ 2.74
NrlP54846 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
NrlP54846 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
NrlP54846 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
NrlP54846 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.89■■■□□ 2.7
NrlP54846 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
NrlP54846 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NrlP54846 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.81■■■□□ 2.68
NrlP54846 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
NrlP54846 Gm25262-201ENSMUST00000174934 133 ntBASIC31.59■■■□□ 2.65
NrlP54846 Gm27325-201ENSMUST00000175467 74 ntBASIC31.56■■■□□ 2.64
NrlP54846 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.55■■■□□ 2.64
NrlP54846 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.49■■■□□ 2.63
NrlP54846 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NrlP54846 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NrlP54846 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NrlP54846 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NrlP54846 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NrlP54846 Rab21-202ENSMUST00000218831 843 ntBASIC31.14■■■□□ 2.58
NrlP54846 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.13■■■□□ 2.57
NrlP54846 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
NrlP54846 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NrlP54846 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NrlP54846 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.08■■■□□ 2.57
NrlP54846 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.99■■■□□ 2.55
NrlP54846 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.95■■■□□ 2.54
NrlP54846 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.93■■■□□ 2.54
NrlP54846 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
NrlP54846 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
NrlP54846 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NrlP54846 Gm26115-201ENSMUST00000175605 87 ntBASIC30.89■■■□□ 2.54
NrlP54846 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
NrlP54846 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
NrlP54846 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NrlP54846 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NrlP54846 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
NrlP54846 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.68■■■□□ 2.5
NrlP54846 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.67■■■□□ 2.5
NrlP54846 Gm8109-201ENSMUST00000194076 746 ntBASIC30.67■■■□□ 2.5
NrlP54846 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NrlP54846 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.65■■■□□ 2.5
NrlP54846 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
NrlP54846 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NrlP54846 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.56■■■□□ 2.48
NrlP54846 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
NrlP54846 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.5■■■□□ 2.47
NrlP54846 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NrlP54846 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NrlP54846 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.45■■■□□ 2.47
NrlP54846 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NrlP54846 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
NrlP54846 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
NrlP54846 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
NrlP54846 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
NrlP54846 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
NrlP54846 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
NrlP54846 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
NrlP54846 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.15■■■□□ 2.42
NrlP54846 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NrlP54846 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.06■■■□□ 2.4
NrlP54846 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.05■■■□□ 2.4
NrlP54846 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NrlP54846 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
NrlP54846 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.98■■■□□ 2.39
NrlP54846 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
NrlP54846 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms