RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Rhox8Q6VSS7 320 aa16.15■□□□□ 0.18
Ttc28-201ENSMUST00000040111 Ehmt2Q9Z148 1263 aaKnown RBP14.97□□□□□ -0.01
Ttc28-201ENSMUST00000040111 Ccdc136Q3TVA9 1136 aa14.51□□□□□ -0.09
Ttc28-201ENSMUST00000040111 Cngb1E1AZ71 1325 aa14.31□□□□□ -0.12
Ttc28-201ENSMUST00000040111 Gab3Q8BSM5 595 aa14.28□□□□□ -0.12
Ttc28-201ENSMUST00000040111 Esf1Q3V1V3 845 aaKnown RBP14.18□□□□□ -0.14
Ttc28-201ENSMUST00000040111 Rpgrip1Q9EPQ2 1331 aa14.07□□□□□ -0.16
Ttc28-201ENSMUST00000040111 Zeb1Q64318 1117 aa13.97□□□□□ -0.17
Ttc28-201ENSMUST00000040111 Myt1lP97500 1187 aa13.95□□□□□ -0.18
Ttc28-201ENSMUST00000040111 Ube2uB1AUC4 352 aa13.94□□□□□ -0.18
Ttc28-201ENSMUST00000040111 Wdr66E9Q743 1299 aa13.9□□□□□ -0.18
Ttc28-201ENSMUST00000040111 Las1lA2BE28 776 aaKnown RBP13.88□□□□□ -0.19
Ttc28-201ENSMUST00000040111 Npm2Q80W85 207 aa13.81□□□□□ -0.2
Ttc28-201ENSMUST00000040111 Pelp1Q9DBD5 1123 aaKnown RBP13.74□□□□□ -0.21
Ttc28-201ENSMUST00000040111 Trim41Q5NCC3 630 aa13.7□□□□□ -0.22
Ttc28-201ENSMUST00000040111 Il27Q8K3I6 234 aa13.65□□□□□ -0.22
Ttc28-201ENSMUST00000040111 NischQ80TM9 1593 aa13.61□□□□□ -0.23
Ttc28-201ENSMUST00000040111 UbtfP25976 765 aaKnown RBP13.54□□□□□ -0.24
Ttc28-201ENSMUST00000040111 Ap3b1Q9Z1T1 1105 aa13.5□□□□□ -0.25
Ttc28-201ENSMUST00000040111 Ppargc1bQ8VHJ7 1014 aa13.47□□□□□ -0.25
Ttc28-201ENSMUST00000040111 Gm35339A0A140LHH9 1649 aa13.44□□□□□ -0.26
Ttc28-201ENSMUST00000040111 Slc24a1Q91WD8 1130 aa13.42□□□□□ -0.26
Ttc28-201ENSMUST00000040111 Abcc9P70170 1546 aa13.38□□□□□ -0.27
Ttc28-201ENSMUST00000040111 Amer1Q7TS75 1132 aa13.3□□□□□ -0.28
Ttc28-201ENSMUST00000040111 Neurod1Q60867 357 aa13.22□□□□□ -0.29
Ttc28-201ENSMUST00000040111 CenpbP27790 599 aa13.19□□□□□ -0.3
Ttc28-201ENSMUST00000040111 Zbtb7cQ8VCZ7 619 aa13.15□□□□□ -0.3
Ttc28-201ENSMUST00000040111 Ifnlr1Q8CGK5 535 aa13.13□□□□□ -0.31
Ttc28-201ENSMUST00000040111 Zcchc6Q5BLK4 1491 aaKnown RBP13.1□□□□□ -0.31
Ttc28-201ENSMUST00000040111 Fam50aQ9WV03 339 aaKnown RBP13.09□□□□□ -0.31
Ttc28-201ENSMUST00000040111 Acin1Q9JIX8 1338 aaKnown RBP13.07□□□□□ -0.32
Ttc28-201ENSMUST00000040111 Ttbk1Q6PCN3 1308 aa13.05□□□□□ -0.32
Ttc28-201ENSMUST00000040111 Rtl1Q7M732 1744 aa13.04□□□□□ -0.32
Ttc28-201ENSMUST00000040111 Plppr3Q7TPB0 716 aa13□□□□□ -0.33
Ttc28-201ENSMUST00000040111 Zbtb4Q5F293 982 aa12.99□□□□□ -0.33
Ttc28-201ENSMUST00000040111 Lmod2Q3UHZ5 550 aa12.97□□□□□ -0.33
Ttc28-201ENSMUST00000040111 Chic1Q8CBW7 227 aa12.9□□□□□ -0.34
Ttc28-201ENSMUST00000040111 Eif5bQ05D44 1216 aaKnown RBP12.89□□□□□ -0.35
Ttc28-201ENSMUST00000040111 Mapk8ip2Q9ERE9 830 aa12.89□□□□□ -0.35
Ttc28-201ENSMUST00000040111 Os9Q8K2C7 672 aa12.87□□□□□ -0.35
Ttc28-201ENSMUST00000040111 4930567H17RikQ3V0K5 233 aa12.86□□□□□ -0.35
Ttc28-201ENSMUST00000040111 Fkbp15Q6P9Q6 1216 aaKnown RBP12.86□□□□□ -0.35
Ttc28-201ENSMUST00000040111 Prdm10Q3UTQ7 1184 aa12.86□□□□□ -0.35
Ttc28-201ENSMUST00000040111 Plekhg3Q4VAC9 1341 aa12.83□□□□□ -0.36
Ttc28-201ENSMUST00000040111 Stra8P70278 393 aa12.79□□□□□ -0.36
Ttc28-201ENSMUST00000040111 Ccdc180J3QNE4 1664 aa12.77□□□□□ -0.37
Ttc28-201ENSMUST00000040111 NclP09405 707 aaKnown RBP12.76□□□□□ -0.37
Ttc28-201ENSMUST00000040111 Hnrnpul2Q00PI9 745 aaKnown RBP12.74□□□□□ -0.37
Ttc28-201ENSMUST00000040111 NefmP08553 848 aa12.74□□□□□ -0.37
Ttc28-201ENSMUST00000040111 HrcG5E8J6 738 aa12.73□□□□□ -0.37
Ttc28-201ENSMUST00000040111 Supt5hO55201 1082 aaKnown RBP12.72□□□□□ -0.37
Ttc28-201ENSMUST00000040111 Myt1Q8CFC2 1127 aa12.7□□□□□ -0.38
Ttc28-201ENSMUST00000040111 Mier1Q5UAK0 511 aa12.69□□□□□ -0.38
Ttc28-201ENSMUST00000040111 Pcgf6Q99NA9 353 aa12.68□□□□□ -0.38
Ttc28-201ENSMUST00000040111 Erich6D3Z6S9 713 aa12.68□□□□□ -0.38
Ttc28-201ENSMUST00000040111 4933416C03RikQ3V063 378 aa12.67□□□□□ -0.38
Ttc28-201ENSMUST00000040111 Gm38655A0A286YDK6 273 aa12.64□□□□□ -0.39
Ttc28-201ENSMUST00000040111 Npm1Q61937 292 aaKnown RBP12.64□□□□□ -0.39
Ttc28-201ENSMUST00000040111 Eid3Q3V124 375 aa12.63□□□□□ -0.39
Ttc28-201ENSMUST00000040111 Cdk11bP24788 784 aaKnown RBP12.61□□□□□ -0.39
Ttc28-201ENSMUST00000040111 Gm13697A2AK42 830 aa12.57□□□□□ -0.4
Ttc28-201ENSMUST00000040111 Atp1b4Q99ME6 356 aa12.54□□□□□ -0.4
Ttc28-201ENSMUST00000040111 NrdcQ8BHG1 1161 aa12.54□□□□□ -0.4
Ttc28-201ENSMUST00000040111 Rangap1P46061 589 aaKnown RBP12.51□□□□□ -0.41
Ttc28-201ENSMUST00000040111 Nop58Q6DFW4 536 aaKnown RBP12.5□□□□□ -0.41
Ttc28-201ENSMUST00000040111 TonslQ6NZL6 1363 aa12.47□□□□□ -0.41
Ttc28-201ENSMUST00000040111 Chic2Q9D9G3 165 aa12.42□□□□□ -0.42
Ttc28-201ENSMUST00000040111 DiexfQ8BTT6 772 aaKnown RBP12.41□□□□□ -0.42
Ttc28-201ENSMUST00000040111 NeflP08551 543 aa12.41□□□□□ -0.42
Ttc28-201ENSMUST00000040111 Polr3glQ8R0C0 218 aa12.4□□□□□ -0.42
Ttc28-201ENSMUST00000040111 Tnnt3Q9QZ47 272 aa12.4□□□□□ -0.42
Ttc28-201ENSMUST00000040111 Csrnp3P59055 597 aa12.39□□□□□ -0.43
Ttc28-201ENSMUST00000040111 Ubl4bQ9CQ84 188 aa12.39□□□□□ -0.43
Ttc28-201ENSMUST00000040111 ArxO35085 564 aa12.38□□□□□ -0.43
Ttc28-201ENSMUST00000040111 Abcc8B2RUS7 1588 aa12.34□□□□□ -0.43
Ttc28-201ENSMUST00000040111 Gm13695A2AK44 830 aa12.33□□□□□ -0.44
Ttc28-201ENSMUST00000040111 Anp32bQ9EST5 272 aaKnown RBP12.27□□□□□ -0.45
Ttc28-201ENSMUST00000040111 Rtl5Q5DTT4 599 aa12.26□□□□□ -0.45
Ttc28-201ENSMUST00000040111 Clip1Q922J3 1391 aa12.25□□□□□ -0.45
Ttc28-201ENSMUST00000040111 Nlrp6Q91WS2 869 aa12.25□□□□□ -0.45
Ttc28-201ENSMUST00000040111 Ecm2Q5FW85 670 aa12.23□□□□□ -0.45
Ttc28-201ENSMUST00000040111 Sall2Q9QX96 1004 aa12.21□□□□□ -0.45
Ttc28-201ENSMUST00000040111 Rad21Q61550 635 aaKnown RBP12.21□□□□□ -0.46
Ttc28-201ENSMUST00000040111 P3h3Q8CG70 732 aa12.17□□□□□ -0.46
Ttc28-201ENSMUST00000040111 Irx6Q9ER75 438 aa12.16□□□□□ -0.46
Ttc28-201ENSMUST00000040111 DaxxO35613 739 aa12.13□□□□□ -0.47
Ttc28-201ENSMUST00000040111 Trim26Q99PN3 545 aa12.11□□□□□ -0.47
Ttc28-201ENSMUST00000040111 Anp32aO35381 247 aa12.1□□□□□ -0.47
Ttc28-201ENSMUST00000040111 Safb2Q80YR5 991 aaKnown RBP12.08□□□□□ -0.48
Ttc28-201ENSMUST00000040111 ClspnQ80YR7 1315 aa12.03□□□□□ -0.48
Ttc28-201ENSMUST00000040111 Arhgap27A2AB59 869 aa12.03□□□□□ -0.48
Ttc28-201ENSMUST00000040111 Rgl3Q3UYI5 709 aa12.02□□□□□ -0.48
Ttc28-201ENSMUST00000040111 Rb1cc1Q9ESK9 1588 aa12.02□□□□□ -0.49
Ttc28-201ENSMUST00000040111 BlmO88700 1416 aa12.01□□□□□ -0.49
Ttc28-201ENSMUST00000040111 Grwd1Q810D6 446 aaKnown RBP11.99□□□□□ -0.49
Ttc28-201ENSMUST00000040111 Brd4Q9ESU6 1400 aaKnown RBP11.99□□□□□ -0.49
Ttc28-201ENSMUST00000040111 Kdm2aP59997 1161 aa11.98□□□□□ -0.49
Ttc28-201ENSMUST00000040111 Aebp2Q9Z248 504 aaKnown RBP11.97□□□□□ -0.49
Ttc28-201ENSMUST00000040111 Kif15Q6P9L6 1387 aa11.97□□□□□ -0.49
Ttc28-201ENSMUST00000040111 Vsig10D3YX43 558 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms