RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	TY3B-G	Q99315	1547 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	BUD3	P25558	1636 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	PHO84	P25297	587 aa	Known RBP	0.57	□□□□□ -2.32
SEC8	YPR055W	EFB1	P32471	206 aa	Known RBP	0.57	□□□□□ -2.32
SEC8	YPR055W	PCH2	P38126	564 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	YBL028C	P38202	106 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	DSE1	P40077	573 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	CAX4	P53223	239 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	AQR1	P53943	586 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	RPO31	P04051	1460 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	BUD4	P47136	1447 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	CTA1	P15202	515 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	CDC42	P19073	191 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	PPQ1	P32945	549 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	TIP20	P33891	701 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	RFT1	P38206	574 aa	Predicted RBP	0.57	□□□□□ -2.32
SEC8	YPR055W	SIF2	P38262	535 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	COS4	P43542	379 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	RPN14	P53196	417 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	SMD1	Q02260	146 aa	Predicted RBP	0.57	□□□□□ -2.32
SEC8	YPR055W	YMR111C	Q04461	462 aa	Predicted RBP	0.57	□□□□□ -2.32
SEC8	YPR055W	GTO3	Q04806	366 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	YDR222W	Q04925	415 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	BUR2	Q05949	395 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	DBP9	Q06218	594 aa	Known RBP	0.57	□□□□□ -2.32
SEC8	YPR055W	RLP24	Q07915	199 aa	Known RBP	0.57	□□□□□ -2.32
SEC8	YPR055W	ALE1	Q08548	619 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	VMR1	P38735	1592 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	LTE1	P07866	1435 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	VPS63	O13549	108 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	HMX1	P32339	317 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	SRB2	P34162	210 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	PRP39	P39682	629 aa	Known RBP	0.57	□□□□□ -2.32
SEC8	YPR055W	RRG9	P40156	214 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	YGL118C	P53132	145 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	VPS9	P54787	451 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	MIX17	Q03667	156 aa		0.57	□□□□□ -2.32
SEC8	YPR055W	YRA1	Q12159	226 aa	Known RBP	0.57	□□□□□ -2.32
SEC8	YPR055W	DFM1	Q12743	341 aa	Known RBP	0.57	□□□□□ -2.32
SEC8	YPR055W	REP1	P03871	373 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	THR4	P16120	514 aa	Known RBP	0.56	□□□□□ -2.32
SEC8	YPR055W	PUP2	P32379	260 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	DAD2	P36162	133 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	HCH1	P53834	153 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	EOS1	P53938	366 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	PDR5	P33302	1511 aa	Known RBP	0.56	□□□□□ -2.32
SEC8	YPR055W	CKA2	P19454	339 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	RDS1	P25611	832 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	RAD23	P32628	398 aa	Known RBP	0.56	□□□□□ -2.32
SEC8	YPR055W	YBR062C	P38239	180 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	MED6	P38782	295 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	YER188W	P40103	239 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	RPA34	P47006	233 aa	Predicted RBP	0.56	□□□□□ -2.32
SEC8	YPR055W	DXO1	Q06349	442 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	PDR12	Q02785	1511 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	VPS15	P22219	1454 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	PAN1	P32521	1480 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	NUP159	P40477	1460 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	YPK9	Q12697	1472 aa		0.56	□□□□□ -2.32
SEC8	YPR055W	DAL81	P21657	970 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	YCR025C	P25352	136 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	RCK1	P38622	512 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	MMS21	P38632	267 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	YER084W	P40057	128 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	PXR1	P53335	271 aa	Predicted RBP	0.55	□□□□□ -2.32
SEC8	YPR055W	YNL146W	P53906	100 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	YPL080C	Q02826	108 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	RRB1	Q04225	511 aa	Known RBP	0.55	□□□□□ -2.32
SEC8	YPR055W	PSY3	Q12318	242 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	PRP46	Q12417	451 aa	Predicted RBP	0.55	□□□□□ -2.32
SEC8	YPR055W	YBT1	P32386	1661 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	CUP2	P15315	225 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	ERD1	P16151	362 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	KTI12	P34253	313 aa	Known RBP	0.55	□□□□□ -2.32
SEC8	YPR055W	SPO73	P40031	143 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	PMT4	P46971	762 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	YJL144W	P47009	104 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	YGL114W	P53134	725 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	YGR168C	P53293	376 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	APC2	Q12440	853 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	TOP2	P06786	1428 aa	Known RBP	0.55	□□□□□ -2.32
SEC8	YPR055W	DAL5	P15365	543 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	SMI1	P32566	505 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	SUR1	P33300	382 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	YBL081W	P38180	368 aa	Known RBP	0.55	□□□□□ -2.32
SEC8	YPR055W	YHR122W	P38829	231 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	YIL089W	P40500	205 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	YIL012W	P40551	113 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	TFC7	Q12415	435 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	TY2B-LR1	P0C2J3	1770 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	TY2B-F	P0CX63	1770 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	TY2B-GR2	P0CX64	1770 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	TY2B-C	P25384	1770 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	TY2B-DR2	Q03494	1770 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	TY1B-DR1	Q03855	1755 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	TY2B-DR3	Q07791	1770 aa	Known RBP	0.55	□□□□□ -2.32
SEC8	YPR055W	TY2B-OR1	Q12113	1770 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	TY2B-DR1	Q12472	1770 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	TY2B-OR2	Q12501	1770 aa		0.55	□□□□□ -2.32
SEC8	YPR055W	UFD4	P33202	1483 aa		0.54	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms