RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C MHF1Q3E835 90 aa7.12□□□□□ -1.27
LSP1YPL004C MAK32P23060 363 aa7.11□□□□□ -1.27
LSP1YPL004C MRPL39P36533 70 aa7.11□□□□□ -1.27
LSP1YPL004C RTC2P38279 296 aa7.11□□□□□ -1.27
LSP1YPL004C YBR285WP38354 144 aa7.11□□□□□ -1.27
LSP1YPL004C PTH1P38876 190 aaKnown RBP7.11□□□□□ -1.27
LSP1YPL004C CHL4P38907 458 aa7.11□□□□□ -1.27
LSP1YPL004C KRE29P40026 464 aa7.11□□□□□ -1.27
LSP1YPL004C QRI7P43122 407 aa7.11□□□□□ -1.27
LSP1YPL004C HOT1Q03213 719 aa7.11□□□□□ -1.27
LSP1YPL004C SPC19Q03954 165 aa7.11□□□□□ -1.27
LSP1YPL004C HRT1Q08273 121 aa7.11□□□□□ -1.27
LSP1YPL004C YOR289WQ12012 251 aaPredicted RBP7.11□□□□□ -1.27
LSP1YPL004C YDL176WQ12027 708 aa7.11□□□□□ -1.27
LSP1YPL004C WTM2Q12206 467 aa7.11□□□□□ -1.27
LSP1YPL004C OAC1P32332 324 aa7.1□□□□□ -1.27
LSP1YPL004C MCM10P32354 571 aa7.1□□□□□ -1.27
LSP1YPL004C MDH3P32419 343 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
LSP1YPL004C SOF1P33750 489 aaKnown RBP7.1□□□□□ -1.27
LSP1YPL004C PAD1P33751 242 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
LSP1YPL004C MRPL16P38064 232 aa7.1□□□□□ -1.27
LSP1YPL004C AIM3P38266 947 aaKnown RBP7.1□□□□□ -1.27
LSP1YPL004C RPS20P38701 121 aaKnown RBP7.1□□□□□ -1.27
LSP1YPL004C ARN2P38724 620 aa7.1□□□□□ -1.27
LSP1YPL004C RIX1P38883 763 aaPredicted RBP7.1□□□□□ -1.27
LSP1YPL004C MLH1P38920 769 aa7.1□□□□□ -1.27
LSP1YPL004C YER184CP39961 794 aa7.1□□□□□ -1.27
LSP1YPL004C SWP82P43554 623 aa7.1□□□□□ -1.27
LSP1YPL004C MRPL19P53875 158 aa7.1□□□□□ -1.27
LSP1YPL004C OST6Q03723 332 aa7.1□□□□□ -1.27
LSP1YPL004C CRR1Q05790 422 aa7.1□□□□□ -1.27
LSP1YPL004C YPQ2Q06328 317 aa7.1□□□□□ -1.27
LSP1YPL004C RAF1Q06891 181 aa7.1□□□□□ -1.27
LSP1YPL004C DBP10Q12389 995 aaKnown RBP7.1□□□□□ -1.27
LSP1YPL004C SAM35P14693 329 aa7.09□□□□□ -1.27
LSP1YPL004C CAM1P29547 415 aaKnown RBP7.09□□□□□ -1.27
LSP1YPL004C YBR138CP38277 524 aa7.09□□□□□ -1.27
LSP1YPL004C SAP30P38429 201 aa7.09□□□□□ -1.27
LSP1YPL004C ZRG8P40021 1076 aa7.09□□□□□ -1.27
LSP1YPL004C MPH1P40562 993 aa7.09□□□□□ -1.27
LSP1YPL004C LYS5P50113 272 aa7.09□□□□□ -1.27
LSP1YPL004C MON1P53129 644 aa7.09□□□□□ -1.27
LSP1YPL004C RRN9P53437 365 aa7.09□□□□□ -1.27
LSP1YPL004C YMD8Q03697 442 aa7.09□□□□□ -1.27
LSP1YPL004C COQ11Q05892 277 aa7.09□□□□□ -1.27
LSP1YPL004C YLR345WQ06137 509 aa7.09□□□□□ -1.27
LSP1YPL004C MLC2Q06580 163 aa7.09□□□□□ -1.27
LSP1YPL004C RCN2Q12044 265 aa7.09□□□□□ -1.27
LSP1YPL004C HEM4P06174 275 aa7.08□□□□□ -1.28
LSP1YPL004C PHO80P20052 293 aa7.08□□□□□ -1.28
LSP1YPL004C GAS1P22146 559 aaKnown RBP7.08□□□□□ -1.28
LSP1YPL004C MTC6P38849 526 aa7.08□□□□□ -1.28
LSP1YPL004C SEN34P39707 275 aa7.08□□□□□ -1.28
LSP1YPL004C BRR6P53062 197 aa7.08□□□□□ -1.28
LSP1YPL004C APM1Q00776 475 aaPredicted RBP7.08□□□□□ -1.28
LSP1YPL004C KAP120Q02932 1032 aa7.08□□□□□ -1.28
LSP1YPL004C RSM24Q03976 319 aa7.08□□□□□ -1.28
LSP1YPL004C AGE1Q04412 482 aa7.08□□□□□ -1.28
LSP1YPL004C MIM1Q08176 113 aa7.08□□□□□ -1.28
LSP1YPL004C YDL180WQ12301 547 aa7.08□□□□□ -1.28
LSP1YPL004C YHR214C-EQ8TGK0 99 aa7.08□□□□□ -1.28
LSP1YPL004C MET2P08465 486 aa7.07□□□□□ -1.28
LSP1YPL004C RPI1P23250 407 aaKnown RBP7.07□□□□□ -1.28
LSP1YPL004C PRP21P32524 280 aaPredicted RBP7.07□□□□□ -1.28
LSP1YPL004C SSE2P32590 693 aaKnown RBP7.07□□□□□ -1.28
LSP1YPL004C PPG1P32838 368 aa7.07□□□□□ -1.28
LSP1YPL004C BCK2P33306 851 aa7.07□□□□□ -1.28
LSP1YPL004C YLF2P38746 405 aa7.07□□□□□ -1.28
LSP1YPL004C SOP4P39543 234 aaPredicted RBP7.07□□□□□ -1.28
LSP1YPL004C ECM1P39715 212 aa7.07□□□□□ -1.28
LSP1YPL004C TOK1P40310 691 aa7.07□□□□□ -1.28
LSP1YPL004C HIS6P40545 261 aa7.07□□□□□ -1.28
LSP1YPL004C NAS2P40555 220 aa7.07□□□□□ -1.28
LSP1YPL004C SSY5P47002 699 aa7.07□□□□□ -1.28
LSP1YPL004C ADO1P47143 340 aaKnown RBP7.07□□□□□ -1.28
LSP1YPL004C COS10P52924 374 aa7.07□□□□□ -1.28
LSP1YPL004C PCP1P53259 346 aa7.07□□□□□ -1.28
LSP1YPL004C RVB1Q03940 463 aaKnown RBP7.07□□□□□ -1.28
LSP1YPL004C API2Q04413 109 aa7.07□□□□□ -1.28
LSP1YPL004C YLR040CQ07988 224 aa7.07□□□□□ -1.28
LSP1YPL004C PST2Q12335 198 aaKnown RBP7.07□□□□□ -1.28
LSP1YPL004C HMS1Q12398 434 aa7.07□□□□□ -1.28
LSP1YPL004C FOL3Q12676 427 aaPredicted RBP7.07□□□□□ -1.28
LSP1YPL004C YGR161W-CQ3E744 92 aa7.07□□□□□ -1.28
LSP1YPL004C SEC12P11655 471 aa7.06□□□□□ -1.28
LSP1YPL004C MCM1P11746 286 aa7.06□□□□□ -1.28
LSP1YPL004C HMG1P12683 1054 aa7.06□□□□□ -1.28
LSP1YPL004C ATG15P25641 520 aa7.06□□□□□ -1.28
LSP1YPL004C PPA2P28239 310 aa7.06□□□□□ -1.28
LSP1YPL004C AMN1P38285 549 aaPredicted RBP7.06□□□□□ -1.28
LSP1YPL004C VBA2P38358 474 aaKnown RBP7.06□□□□□ -1.28
LSP1YPL004C YHL037CP38733 133 aa7.06□□□□□ -1.28
LSP1YPL004C EGD2P38879 174 aaKnown RBP7.06□□□□□ -1.28
LSP1YPL004C RET2P43621 546 aa7.06□□□□□ -1.28
LSP1YPL004C SAM37P50110 327 aa7.06□□□□□ -1.28
LSP1YPL004C SLD3P53135 668 aa7.06□□□□□ -1.28
LSP1YPL004C PGA1P53896 198 aa7.06□□□□□ -1.28
LSP1YPL004C NUP116Q02630 1113 aa7.06□□□□□ -1.28
LSP1YPL004C YMR265CQ03508 461 aaKnown RBP7.06□□□□□ -1.28
LSP1YPL004C RNH1Q04740 348 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms