RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W DDI1P40087 428 aa13.03□□□□□ -0.32
SHR5YOL110W YPR109WQ06104 294 aa13.03□□□□□ -0.32
SHR5YOL110W YFR010W-AP0C5N0 62 aa13.02□□□□□ -0.33
SHR5YOL110W SEC12P11655 471 aa13.02□□□□□ -0.33
SHR5YOL110W DPB2P24482 689 aaPredicted RBP13.02□□□□□ -0.33
SHR5YOL110W APD1P38281 316 aa13.02□□□□□ -0.33
SHR5YOL110W YMR315WQ04869 349 aaKnown RBP13.02□□□□□ -0.33
SHR5YOL110W RDL2Q08742 149 aaKnown RBP13.02□□□□□ -0.33
SHR5YOL110W YRM1Q12340 786 aa13.02□□□□□ -0.33
SHR5YOL110W YOR343CQ12484 108 aa13.02□□□□□ -0.33
SHR5YOL110W YGL041W-AP0C5N3 154 aa13.01□□□□□ -0.33
SHR5YOL110W SCO1P23833 295 aa13.01□□□□□ -0.33
SHR5YOL110W CHK1P38147 527 aa13.01□□□□□ -0.33
SHR5YOL110W SHE1P38200 338 aa13.01□□□□□ -0.33
SHR5YOL110W MLH1P38920 769 aa13.01□□□□□ -0.33
SHR5YOL110W HIS6P40545 261 aa13.01□□□□□ -0.33
SHR5YOL110W ATG4P53867 494 aa13.01□□□□□ -0.33
SHR5YOL110W YPL039WQ03080 316 aa13.01□□□□□ -0.33
SHR5YOL110W SDC1Q03323 175 aa13.01□□□□□ -0.33
SHR5YOL110W MAK3Q03503 176 aa13.01□□□□□ -0.33
SHR5YOL110W YLR173WQ06247 608 aa13.01□□□□□ -0.33
SHR5YOL110W RKM1Q08961 583 aaPredicted RBP13.01□□□□□ -0.33
SHR5YOL110W YGR161W-CQ3E744 92 aa13.01□□□□□ -0.33
SHR5YOL110W FPS1P23900 669 aa13□□□□□ -0.33
SHR5YOL110W YCL002CP25565 263 aa13□□□□□ -0.33
SHR5YOL110W PAD1P33751 242 aaKnown RBP RIP-Chip data13□□□□□ -0.33not detected
SHR5YOL110W VBA2P38358 474 aaKnown RBP13□□□□□ -0.33
SHR5YOL110W PHO90P39535 881 aa13□□□□□ -0.33
SHR5YOL110W SHO1P40073 367 aa13□□□□□ -0.33
SHR5YOL110W NAS2P40555 220 aa13□□□□□ -0.33
SHR5YOL110W SFH5P47008 294 aa13□□□□□ -0.33
SHR5YOL110W PBP1P53297 722 aaKnown RBP13□□□□□ -0.33
SHR5YOL110W TAZ1Q06510 381 aa13□□□□□ -0.33
SHR5YOL110W PDX1P16451 410 aa12.99□□□□□ -0.33
SHR5YOL110W GAS1P22146 559 aaKnown RBP12.99□□□□□ -0.33
SHR5YOL110W MAL32P38158 584 aa12.99□□□□□ -0.33
SHR5YOL110W NIT2P47016 307 aa12.99□□□□□ -0.33
SHR5YOL110W BRR6P53062 197 aa12.99□□□□□ -0.33
SHR5YOL110W YGR126WP53274 230 aa12.99□□□□□ -0.33
SHR5YOL110W MAL12P53341 584 aa12.99□□□□□ -0.33
SHR5YOL110W SUR7P54003 302 aa12.99□□□□□ -0.33
SHR5YOL110W NUP116Q02630 1113 aa12.99□□□□□ -0.33
SHR5YOL110W MCM21Q06675 368 aa12.99□□□□□ -0.33
SHR5YOL110W MDM36Q06820 579 aa12.99□□□□□ -0.33
SHR5YOL110W YOR238WQ08634 303 aa12.99□□□□□ -0.33
SHR5YOL110W GCN1P33892 2672 aaKnown RBP12.99□□□□□ -0.33
SHR5YOL110W CYT1P07143 309 aa12.98□□□□□ -0.33
SHR5YOL110W RPB10P22139 70 aa12.98□□□□□ -0.33
SHR5YOL110W MOH1P38191 138 aa12.98□□□□□ -0.33
SHR5YOL110W NVJ1P38881 321 aa12.98□□□□□ -0.33
SHR5YOL110W FMC1P40491 155 aa12.98□□□□□ -0.33
SHR5YOL110W YGR066CP53242 292 aa12.98□□□□□ -0.33
SHR5YOL110W NOG1Q02892 647 aaKnown RBP12.98□□□□□ -0.33
SHR5YOL110W SCS7Q03529 384 aa12.98□□□□□ -0.33
SHR5YOL110W RRP17Q04031 235 aaPredicted RBP12.98□□□□□ -0.33
SHR5YOL110W FMP42Q04991 504 aa12.98□□□□□ -0.33
SHR5YOL110W YAL064W-BO13512 126 aa12.97□□□□□ -0.33
SHR5YOL110W RPL7AP05737 244 aaKnown RBP12.97□□□□□ -0.33
SHR5YOL110W KIN28P06242 306 aa12.97□□□□□ -0.33
SHR5YOL110W CTA1P15202 515 aa12.97□□□□□ -0.33
SHR5YOL110W STS1P38637 319 aa12.97□□□□□ -0.33
SHR5YOL110W YER184CP39961 794 aa12.97□□□□□ -0.33
SHR5YOL110W PHB1P40961 287 aa12.97□□□□□ -0.33
SHR5YOL110W VOA1P53262 265 aa12.97□□□□□ -0.33
SHR5YOL110W SRL4Q03085 281 aa12.97□□□□□ -0.33
SHR5YOL110W GRX3Q03835 250 aa12.97□□□□□ -0.33
SHR5YOL110W MGR3Q04472 501 aa12.97□□□□□ -0.33
SHR5YOL110W GAL83Q04739 417 aa12.97□□□□□ -0.33
SHR5YOL110W YPR147CQ06522 304 aaKnown RBP12.97□□□□□ -0.33
SHR5YOL110W RPL7BQ12213 244 aaKnown RBP12.97□□□□□ -0.33
SHR5YOL110W ECT1P33412 323 aa12.96□□□□□ -0.33
SHR5YOL110W YPK3P38070 525 aa12.96□□□□□ -0.33
SHR5YOL110W SDP1P40479 209 aa12.96□□□□□ -0.33
SHR5YOL110W POP1P41812 875 aa12.96□□□□□ -0.33
SHR5YOL110W PFS2P42841 465 aaKnown RBP12.96□□□□□ -0.33
SHR5YOL110W RRP9Q06506 573 aaKnown RBP12.96□□□□□ -0.33
SHR5YOL110W IPK1Q06667 281 aa12.96□□□□□ -0.33
SHR5YOL110W THP3Q12049 470 aaKnown RBP12.96□□□□□ -0.33
SHR5YOL110W SFG1Q12507 346 aa12.96□□□□□ -0.33
SHR5YOL110W REP1P03871 373 aa12.95□□□□□ -0.34
SHR5YOL110W ARO7P32178 256 aa12.95□□□□□ -0.34
SHR5YOL110W DTR1P38125 572 aa12.95□□□□□ -0.34
SHR5YOL110W FMP23P38231 175 aa12.95□□□□□ -0.34
SHR5YOL110W YIL165CP40446 119 aa12.95□□□□□ -0.34
SHR5YOL110W LYS5P50113 272 aa12.95□□□□□ -0.34
SHR5YOL110W MRPL51Q06090 140 aaPredicted RBP12.95□□□□□ -0.34
SHR5YOL110W YOL114CQ12322 202 aa12.95□□□□□ -0.34
SHR5YOL110W NFT1P0CE68 1218 aa12.94□□□□□ -0.34
SHR5YOL110W RPL24BP24000 155 aaKnown RBP12.94□□□□□ -0.34
SHR5YOL110W FUN19P28003 413 aaPredicted RBP12.94□□□□□ -0.34
SHR5YOL110W SDS22P36047 338 aa12.94□□□□□ -0.34
SHR5YOL110W RPS26AP39938 119 aaKnown RBP12.94□□□□□ -0.34
SHR5YOL110W RPS26BP39939 119 aaKnown RBP12.94□□□□□ -0.34
SHR5YOL110W YGL260WP53056 76 aa12.94□□□□□ -0.34
SHR5YOL110W FDC1Q03034 503 aa12.94□□□□□ -0.34
SHR5YOL110W YDL114WQ07530 308 aa12.94□□□□□ -0.34
SHR5YOL110W FRE5Q08908 694 aa12.94□□□□□ -0.34
SHR5YOL110W TMS1Q12116 473 aa12.94□□□□□ -0.34
SHR5YOL110W CDC9P04819 755 aa12.93□□□□□ -0.34
SHR5YOL110W UTR1P21373 530 aa12.93□□□□□ -0.34
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms