RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C SHE1P38200 338 aa1.87□□□□□ -2.11
RPB11YOL005C RCK2P38623 610 aa1.87□□□□□ -2.11
RPB11YOL005C CHL4P38907 458 aa1.87□□□□□ -2.11
RPB11YOL005C EFM3P47163 339 aa1.87□□□□□ -2.11
RPB11YOL005C NAS6P50086 228 aa1.87□□□□□ -2.11
RPB11YOL005C YGR016WP53209 190 aa1.87□□□□□ -2.11
RPB11YOL005C HCH1P53834 153 aa1.87□□□□□ -2.11
RPB11YOL005C PDR16P53860 351 aaKnown RBP1.87□□□□□ -2.11
RPB11YOL005C SUR7P54003 302 aa1.87□□□□□ -2.11
RPB11YOL005C RRB1Q04225 511 aaKnown RBP1.87□□□□□ -2.11
RPB11YOL005C RAD9P14737 1309 aa1.87□□□□□ -2.11
RPB11YOL005C VMR1P38735 1592 aa1.86□□□□□ -2.11
RPB11YOL005C PDR11P40550 1411 aa1.86□□□□□ -2.11
RPB11YOL005C YEL043WP32618 956 aa1.86□□□□□ -2.11
RPB11YOL005C DTR1P38125 572 aa1.86□□□□□ -2.11
RPB11YOL005C GGC1P38988 300 aa1.86□□□□□ -2.11
RPB11YOL005C CAJ1P39101 391 aa1.86□□□□□ -2.11
RPB11YOL005C FHL1P39521 936 aa1.86□□□□□ -2.11
RPB11YOL005C YCH1P42937 148 aa1.86□□□□□ -2.11
RPB11YOL005C COQ5P49017 307 aa1.86□□□□□ -2.11
RPB11YOL005C LSG1P53145 640 aaKnown RBP1.86□□□□□ -2.11
RPB11YOL005C API2Q04413 109 aa1.86□□□□□ -2.11
RPB11YOL005C SPH1Q06160 661 aa1.86□□□□□ -2.11
RPB11YOL005C IES4Q08561 116 aa1.86□□□□□ -2.11
RPB11YOL005C APC2Q12440 853 aa1.86□□□□□ -2.11
RPB11YOL005C RAX2Q12465 1220 aa1.86□□□□□ -2.11
RPB11YOL005C YAL067W-AQ8TGK6 75 aa1.86□□□□□ -2.11
RPB11YOL005C MHP1P43638 1398 aa1.85□□□□□ -2.11
RPB11YOL005C IML1P47170 1584 aa1.85□□□□□ -2.11
RPB11YOL005C ZIP1P31111 875 aa1.85□□□□□ -2.11
RPB11YOL005C SHE3P38272 425 aaKnown RBP1.85□□□□□ -2.11
RPB11YOL005C YHR122WP38829 231 aa1.85□□□□□ -2.11
RPB11YOL005C YFR018CP43599 363 aa1.85□□□□□ -2.11
RPB11YOL005C TAF10Q12030 206 aa1.85□□□□□ -2.11
RPB11YOL005C TPI1P00942 248 aaKnown RBP1.84□□□□□ -2.11
RPB11YOL005C SPS100P13130 326 aa1.84□□□□□ -2.11
RPB11YOL005C ERG9P29704 444 aa1.84□□□□□ -2.11
RPB11YOL005C KTI12P34253 313 aaKnown RBP1.84□□□□□ -2.11
RPB11YOL005C UIP5P36137 443 aa1.84□□□□□ -2.11
RPB11YOL005C TAE1P38340 232 aa1.84□□□□□ -2.11
RPB11YOL005C SMF2P38778 549 aa1.84□□□□□ -2.11
RPB11YOL005C BTT1P40314 149 aaPredicted RBP1.84□□□□□ -2.11
RPB11YOL005C YGR168CP53293 376 aa1.84□□□□□ -2.11
RPB11YOL005C UTP15Q04305 513 aaKnown RBP1.84□□□□□ -2.11
RPB11YOL005C MRX8Q05473 314 aa1.84□□□□□ -2.11
RPB11YOL005C ALE1Q08548 619 aa1.84□□□□□ -2.11
RPB11YOL005C PGC1Q08959 321 aa1.84□□□□□ -2.11
RPB11YOL005C RPN6Q12377 434 aa1.84□□□□□ -2.11
RPB11YOL005C IKI3Q06706 1349 aaKnown RBP1.84□□□□□ -2.12
RPB11YOL005C AUS1Q08409 1394 aa1.84□□□□□ -2.12
RPB11YOL005C TY3B-IQ7LHG5 1498 aaKnown RBP1.83□□□□□ -2.12
RPB11YOL005C HAP1P0CE41 1502 aa1.83□□□□□ -2.12
RPB11YOL005C STF1P01098 86 aa1.83□□□□□ -2.12
RPB11YOL005C RNR2P09938 399 aaKnown RBP1.83□□□□□ -2.12
RPB11YOL005C CTA1P15202 515 aa1.83□□□□□ -2.12
RPB11YOL005C RBK1P25332 333 aa1.83□□□□□ -2.12
RPB11YOL005C ITR2P30606 609 aa1.83□□□□□ -2.12
RPB11YOL005C VMA5P31412 392 aaKnown RBP1.83□□□□□ -2.12
RPB11YOL005C MEI5P32489 222 aa1.83□□□□□ -2.12
RPB11YOL005C MMS21P38632 267 aa1.83□□□□□ -2.12
RPB11YOL005C YMR134WP40207 237 aa1.83□□□□□ -2.12
RPB11YOL005C YGR067CP53243 804 aa1.83□□□□□ -2.12
RPB11YOL005C PXR1P53335 271 aaPredicted RBP1.83□□□□□ -2.12
RPB11YOL005C SCS7Q03529 384 aa1.83□□□□□ -2.12
RPB11YOL005C INP1Q03694 420 aa1.83□□□□□ -2.12
RPB11YOL005C PIN3Q06449 215 aa1.83□□□□□ -2.12
RPB11YOL005C NUP188P52593 1655 aaKnown RBP1.83□□□□□ -2.12
RPB11YOL005C VPS63O13549 108 aa1.82□□□□□ -2.12
RPB11YOL005C GAL3P13045 520 aa1.82□□□□□ -2.12
RPB11YOL005C FMT1P32785 401 aa1.82□□□□□ -2.12
RPB11YOL005C SKG6P32900 734 aaPredicted RBP1.82□□□□□ -2.12
RPB11YOL005C DBP7P36120 742 aaKnown RBP1.82□□□□□ -2.12
RPB11YOL005C PEX32P38292 413 aa1.82□□□□□ -2.12
RPB11YOL005C POP2P39008 433 aa1.82□□□□□ -2.12
RPB11YOL005C NAS2P40555 220 aa1.82□□□□□ -2.12
RPB11YOL005C FYV8P46949 817 aaKnown RBP1.82□□□□□ -2.12
RPB11YOL005C SHE4P51534 789 aa1.82□□□□□ -2.12
RPB11YOL005C TAF6P53040 516 aa1.82□□□□□ -2.12
RPB11YOL005C YMR244WQ04018 355 aa1.82□□□□□ -2.12
RPB11YOL005C YDR262WQ12331 272 aa1.82□□□□□ -2.12
RPB11YOL005C PRM7Q12459 698 aa1.82□□□□□ -2.12
RPB11YOL005C RPS24AP0CX31 135 aaKnown RBP1.81□□□□□ -2.12
RPB11YOL005C RPS24BP0CX32 135 aaKnown RBP1.81□□□□□ -2.12
RPB11YOL005C RPL18AP0CX49 186 aaKnown RBP1.81□□□□□ -2.12
RPB11YOL005C RPL18BP0CX50 186 aaKnown RBP1.81□□□□□ -2.12
RPB11YOL005C ERD1P16151 362 aa1.81□□□□□ -2.12
RPB11YOL005C DCC1P25559 380 aa1.81□□□□□ -2.12
RPB11YOL005C LIN1P38852 340 aaPredicted RBP1.81□□□□□ -2.12
RPB11YOL005C END3P39013 349 aa1.81□□□□□ -2.12
RPB11YOL005C FMP48P53233 369 aa1.81□□□□□ -2.12
RPB11YOL005C SED5Q01590 340 aa1.81□□□□□ -2.12
RPB11YOL005C RVB1Q03940 463 aaKnown RBP1.81□□□□□ -2.12
RPB11YOL005C SLF1Q12034 447 aaKnown RBP1.81□□□□□ -2.12
RPB11YOL005C YDL211CQ12121 372 aa1.81□□□□□ -2.12
RPB11YOL005C YOL085CQ99345 113 aa1.81□□□□□ -2.12
RPB11YOL005C VMA2P16140 517 aaKnown RBP1.8□□□□□ -2.12
RPB11YOL005C FUS3P16892 353 aaKnown RBP1.8□□□□□ -2.12
RPB11YOL005C YPS1P32329 569 aa1.8□□□□□ -2.12
RPB11YOL005C RAD23P32628 398 aaKnown RBP1.8□□□□□ -2.12
RPB11YOL005C CBF5P33322 483 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms