RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	YCR022C	P25620	114 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	CAT2	P32796	670 aa	Known RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	PRS2	P38620	318 aa	Known RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	RTT107	P38850	1070 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	PEX18	P38855	283 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	PET8	P38921	284 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	PMT4	P46971	762 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	YGL260W	P53056	76 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	PXR1	P53335	271 aa	Predicted RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	HCH1	P53834	153 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	IPK1	Q06667	281 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	SMC5	Q08204	1093 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	PER33	Q12144	273 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	YLR126C	Q12288	251 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	RMD5	Q12508	421 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	HTB1	P02293	131 aa	Known RBP	1.09	□□□□□ -2.23
CLU1	YMR012W	HTB2	P02294	131 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	PUT1	P09368	476 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	YAR066W	P0CX18	203 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	YHR214W	P0CX19	203 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	FBA1	P14540	359 aa	Known RBP	1.09	□□□□□ -2.23
CLU1	YMR012W	CTA1	P15202	515 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	COQ1	P18900	473 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	RDS1	P25611	832 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	INO2	P26798	304 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	MSK1	P32048	576 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	RAD5	P32849	1169 aa	Predicted RBP	1.09	□□□□□ -2.23
CLU1	YMR012W	SPT4	P32914	102 aa	Predicted RBP	1.09	□□□□□ -2.23
CLU1	YMR012W	AST1	P35183	429 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	HES1	P35843	434 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	PRS4	P38063	326 aa	Predicted RBP	1.09	□□□□□ -2.23
CLU1	YMR012W	RHO3	Q00245	231 aa	Known RBP	1.09	□□□□□ -2.23
CLU1	YMR012W	SED5	Q01590	340 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	VPS20	Q04272	221 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	SEC13	Q04491	297 aa	Known RBP	1.09	□□□□□ -2.23
CLU1	YMR012W	ATG26	Q06321	1198 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	SSK1	Q07084	712 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	PLB3	Q08108	686 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	AI5_BETA	Q9ZZX0	354 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	RAD3	P06839	778 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	YMR31	P19955	123 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	TRM2	P33753	639 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	CSG2	P35206	410 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	SPT8	P38915	602 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	EXO1	P39875	702 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	YJL213W	P40896	331 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	YNL320W	P42840	284 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	UBP8	P50102	471 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	ERG26	P53199	349 aa	Known RBP	1.09	□□□□□ -2.23
CLU1	YMR012W	YMR244W	Q04018	355 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	ULA1	Q12059	462 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	PUS9	Q12069	462 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	RNH203	Q12338	110 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	YIL002W-A	Q3E7Z5	69 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	RGS2	Q99188	309 aa		1.09	□□□□□ -2.23
CLU1	YMR012W	RAD1	P06777	1100 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	MET16	P18408	261 aa	Predicted RBP	1.09	□□□□□ -2.24
CLU1	YMR012W	RSA4	P25382	515 aa	Known RBP	1.09	□□□□□ -2.24
CLU1	YMR012W	TRS65	P32893	560 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	GDH2	P33327	1092 aa	Known RBP	1.09	□□□□□ -2.24
CLU1	YMR012W	ECM13	P38195	257 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	MED6	P38782	295 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	FMP33	P46998	180 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	YPS5	P53057	165 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	MRM2	P53123	320 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	YGR127W	P53275	312 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	MSO1	P53604	210 aa	Known RBP	1.09	□□□□□ -2.24
CLU1	YMR012W	TRM112	P53738	135 aa	Predicted RBP	1.09	□□□□□ -2.24
CLU1	YMR012W	ASI3	P53983	676 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	FIN1	Q03898	291 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	LIP2	Q06005	328 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	RRS1	Q08746	203 aa	Known RBP	1.09	□□□□□ -2.24
CLU1	YMR012W	YOR376W	Q08900	122 aa		1.09	□□□□□ -2.24
CLU1	YMR012W	DBF2	P22204	572 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	VPS34	P22543	875 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	YCR100C	P25606	316 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	PRP21	P32524	280 aa	Predicted RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	COS9	P36034	407 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	1.08	□□□□□ -2.24	not detected
CLU1	YMR012W	FIG1	P38224	298 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	YJR012C	P47087	207 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	BOP2	Q06150	570 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	POS5	Q06892	414 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	HIS1	P00498	297 aa	Known RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	RNA1	P11745	407 aa	Known RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	EXG1	P23776	448 aa	Known RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	SNT1	P25357	1226 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	CHK1	P38147	527 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	OM14	P38325	134 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	EFM2	P38347	419 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	XBP1	P40489	647 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	YFL067W	P43537	175 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	LCB3	P47013	409 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	CWC23	P52868	283 aa	Predicted RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	HOP2	P53187	214 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	NOP19	P53317	196 aa	Predicted RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	1.08	□□□□□ -2.24	not detected
CLU1	YMR012W	YNL040W	P53960	456 aa	Predicted RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	ERG13	P54839	491 aa	Known RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	RQC1	Q05468	723 aa	Known RBP	1.08	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms