RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKT6	YKL196C	YJR112W-A	Q3E743	109 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	YLR361C-A	Q3E795	98 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	YOR111W	Q99210	232 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	REV3	P14284	1504 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	GAL3	P13045	520 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	DPM1	P14020	267 aa	Known RBP	3.19	□□□□□ -1.9
YKT6	YKL196C	RPS1B	P23248	255 aa	Known RBP	3.19	□□□□□ -1.9
YKT6	YKL196C	SHP1	P34223	423 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	CSG2	P35206	410 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	RPC25	P35718	212 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	RIB1	P38066	345 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	MAL33	P38157	468 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	ECM13	P38195	257 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	YBR220C	P38318	560 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	WSC4	P38739	605 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	YHR122W	P38829	231 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	PSD1	P39006	500 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	CCT4	P39078	528 aa	Known RBP	3.19	□□□□□ -1.9
YKT6	YKL196C	VMA7	P39111	118 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	UIP3	P39547	235 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	NPT1	P39683	429 aa	Known RBP	3.19	□□□□□ -1.9
YKT6	YKL196C	AST2	P39945	430 aa	Known RBP	3.19	□□□□□ -1.9
YKT6	YKL196C	PGD1	P40356	397 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	DOT5	P40553	215 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	IME4	P41833	600 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	PRM10	P42946	383 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	FMP33	P46998	180 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	LYS20	P48570	428 aa	Known RBP	3.19	□□□□□ -1.9
YKT6	YKL196C	SWC4	P53201	476 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	NOP19	P53317	196 aa	Predicted RBP	3.19	□□□□□ -1.9
YKT6	YKL196C	RHO5	P53879	331 aa	Known RBP	3.19	□□□□□ -1.9
YKT6	YKL196C	ALG11	P53954	548 aa	Known RBP	3.19	□□□□□ -1.9
YKT6	YKL196C	YLR460C	P54007	376 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	YAT1	P80235	687 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	ATG21	Q02887	496 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	SNO1	Q03144	224 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	MTG1	Q03151	367 aa	Predicted RBP	3.19	□□□□□ -1.9
YKT6	YKL196C	PEX10	Q05568	337 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	CRD1	Q07560	283 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	AIM6	Q07716	390 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	YLR036C	Q07986	203 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	TRM10	Q12400	293 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	KRE5	P22023	1365 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	MMS22	Q06164	1454 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	IRC20	Q06554	1556 aa		3.19	□□□□□ -1.9
YKT6	YKL196C	TY2B-LR1	P0C2J3	1770 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	TY2B-F	P0CX63	1770 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	TY2B-GR2	P0CX64	1770 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	TY2B-C	P25384	1770 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	TY2B-DR2	Q03494	1770 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	TY1B-DR1	Q03855	1755 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	TY2B-DR3	Q07791	1770 aa	Known RBP	3.18	□□□□□ -1.9
YKT6	YKL196C	TY2B-OR1	Q12113	1770 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	TY2B-DR1	Q12472	1770 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	TY2B-B	Q12491	1770 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	TY2B-OR2	Q12501	1770 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	TY1B-DR3	Q99231	1755 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	HAP2	P06774	265 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	HIP1	P06775	603 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	NAM2	P11325	894 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	PDA1	P16387	420 aa	Known RBP	3.18	□□□□□ -1.9
YKT6	YKL196C	MRPL44	P19956	98 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	DAL82	P21705	255 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	YSR3	P23501	404 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	CPR3	P25719	182 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	UBC8	P28263	218 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	VMA5	P31412	392 aa	Known RBP	3.18	□□□□□ -1.9
YKT6	YKL196C	TAF14	P35189	244 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	MRPL3	P36516	390 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	PRS4	P38063	326 aa	Predicted RBP	3.18	□□□□□ -1.9
YKT6	YKL196C	RRT2	P38332	387 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	ERG7	P38604	731 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	LEU5	P38702	357 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	FSH1	P38777	243 aa	Known RBP	3.18	□□□□□ -1.9
YKT6	YKL196C	PFS1	P38872	237 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	CHL4	P38907	458 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	RBG1	P39729	369 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	OXA1	P39952	402 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	YEL057C	P39983	233 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	YIL067C	P40514	678 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	MIC19	P43594	170 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
YKT6	YKL196C	PHO86	P46956	311 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	MRX5	P47007	382 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	BIR1	P47134	954 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	YGL235W	P53071	178 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	YGL185C	P53100	379 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	YPR003C	P53394	754 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	TRM112	P53738	135 aa	Predicted RBP	3.18	□□□□□ -1.9
YKT6	YKL196C	NRK1	P53915	240 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	YCL001W-A	P87012	153 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	ABF2	Q02486	183 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	YPL113C	Q02961	396 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	OST6	Q03723	332 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	CAB5	Q03941	241 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	GMC1	Q04399	608 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	YDR109C	Q04585	715 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	YMR253C	Q04835	414 aa		3.18	□□□□□ -1.9
YKT6	YKL196C	BER1	Q06688	274 aa	Known RBP	3.18	□□□□□ -1.9
YKT6	YKL196C	AAD15	Q08361	143 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 82.5 ms