RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W YNL208WP40159 199 aaKnown RBP3.42□□□□□ -1.86
PTM1YKL039W AIM20P40451 204 aa3.42□□□□□ -1.86
PTM1YKL039W YJL055WP47044 245 aa3.42□□□□□ -1.86
PTM1YKL039W PGU1P47180 361 aa3.42□□□□□ -1.86
PTM1YKL039W HOP2P53187 214 aa3.42□□□□□ -1.86
PTM1YKL039W ILV1P00927 576 aaKnown RBP3.41□□□□□ -1.86
PTM1YKL039W THR4P16120 514 aaKnown RBP3.41□□□□□ -1.86
PTM1YKL039W TIR2P33890 251 aa3.41□□□□□ -1.86
PTM1YKL039W ECM4P36156 370 aa3.41□□□□□ -1.86
PTM1YKL039W YBR062CP38239 180 aa3.41□□□□□ -1.86
PTM1YKL039W GAA1P39012 614 aa3.41□□□□□ -1.86
PTM1YKL039W SMX2P40204 77 aaKnown RBP3.41□□□□□ -1.86
PTM1YKL039W RTT102P53330 157 aa3.41□□□□□ -1.86
PTM1YKL039W RET3P53600 189 aa3.41□□□□□ -1.86
PTM1YKL039W MRPS16Q02608 121 aa3.41□□□□□ -1.86
PTM1YKL039W GRX3Q03835 250 aa3.41□□□□□ -1.86
PTM1YKL039W AIM33Q04516 312 aa3.41□□□□□ -1.86
PTM1YKL039W CSM3Q04659 317 aa3.41□□□□□ -1.86
PTM1YKL039W TAF9Q05027 157 aa3.41□□□□□ -1.86
PTM1YKL039W PAR32Q12515 295 aaKnown RBP3.41□□□□□ -1.86
PTM1YKL039W HTZ1Q12692 134 aaKnown RBP3.41□□□□□ -1.86
PTM1YKL039W MRPL25P23369 157 aa3.4□□□□□ -1.87
PTM1YKL039W CSE1P33307 960 aa3.4□□□□□ -1.87
PTM1YKL039W MID2P36027 376 aa3.4□□□□□ -1.87
PTM1YKL039W MNL1P38888 796 aa3.4□□□□□ -1.87
PTM1YKL039W TIM17P39515 158 aa3.4□□□□□ -1.87
PTM1YKL039W YNL320WP42840 284 aa3.4□□□□□ -1.87
PTM1YKL039W COS6P53344 381 aa3.4□□□□□ -1.87
PTM1YKL039W TRM112P53738 135 aaPredicted RBP3.4□□□□□ -1.87
PTM1YKL039W VPS9P54787 451 aa3.4□□□□□ -1.87
PTM1YKL039W RPL22BP56628 122 aaKnown RBP3.4□□□□□ -1.87
PTM1YKL039W UTP6Q02354 440 aaKnown RBP3.4□□□□□ -1.87
PTM1YKL039W IES4Q08561 116 aa3.4□□□□□ -1.87
PTM1YKL039W VIK1Q12045 647 aa3.4□□□□□ -1.87
PTM1YKL039W YDL199CQ12407 687 aa3.4□□□□□ -1.87
PTM1YKL039W ERP4Q12450 207 aa3.4□□□□□ -1.87
PTM1YKL039W LAA1P39526 2014 aa3.4□□□□□ -1.87
PTM1YKL039W GCN1P33892 2672 aaKnown RBP3.4□□□□□ -1.87
PTM1YKL039W PRB1P09232 635 aa3.39□□□□□ -1.87
PTM1YKL039W COT1P32798 439 aa3.39□□□□□ -1.87
PTM1YKL039W SPO23P33757 523 aa3.39□□□□□ -1.87
PTM1YKL039W BLI1P35727 113 aa3.39□□□□□ -1.87
PTM1YKL039W HSM3P38348 480 aa3.39□□□□□ -1.87
PTM1YKL039W RCK2P38623 610 aa3.39□□□□□ -1.87
PTM1YKL039W GEP4P38812 185 aa3.39□□□□□ -1.87
PTM1YKL039W VMA10P48836 114 aaKnown RBP3.39□□□□□ -1.87
PTM1YKL039W TAF6P53040 516 aa3.39□□□□□ -1.87
PTM1YKL039W ALG11P53954 548 aaKnown RBP3.39□□□□□ -1.87
PTM1YKL039W FUS2Q05670 677 aa3.39□□□□□ -1.87
PTM1YKL039W YOL075CQ08234 1294 aa3.39□□□□□ -1.87
PTM1YKL039W AAD15Q08361 143 aa3.39□□□□□ -1.87
PTM1YKL039W MSH5Q12175 901 aa3.39□□□□□ -1.87
PTM1YKL039W PCL9Q12477 304 aa3.39□□□□□ -1.87
PTM1YKL039W CKA2P19454 339 aa3.38□□□□□ -1.87
PTM1YKL039W RPC19P28000 142 aaKnown RBP3.38□□□□□ -1.87
PTM1YKL039W FES1P38260 290 aa3.38□□□□□ -1.87
PTM1YKL039W PET100P38958 111 aa3.38□□□□□ -1.87
PTM1YKL039W PDS1P40316 373 aaPredicted RBP3.38□□□□□ -1.87
PTM1YKL039W JEM1P40358 645 aa3.38□□□□□ -1.87
PTM1YKL039W YRB1P41920 201 aaKnown RBP3.38□□□□□ -1.87
PTM1YKL039W YNL146WP53906 100 aa3.38□□□□□ -1.87
PTM1YKL039W YHC1Q05900 231 aaKnown RBP3.38□□□□□ -1.87
PTM1YKL039W IPK1Q06667 281 aa3.38□□□□□ -1.87
PTM1YKL039W LDS2Q08218 356 aa3.38□□□□□ -1.87
PTM1YKL039W SGT2Q12118 346 aaKnown RBP3.38□□□□□ -1.87
PTM1YKL039W BEM2P39960 2167 aaKnown RBP3.38□□□□□ -1.87
PTM1YKL039W YLR462WO13556 202 aa3.38□□□□□ -1.87
PTM1YKL039W ZRC1P20107 442 aa3.38□□□□□ -1.87
PTM1YKL039W MNE1P24720 663 aa3.38□□□□□ -1.87
PTM1YKL039W EFB1P32471 206 aaKnown RBP3.38□□□□□ -1.87
PTM1YKL039W ECM8P38246 354 aa3.38□□□□□ -1.87
PTM1YKL039W YHL049CP38722 271 aa3.38□□□□□ -1.87
PTM1YKL039W MED6P38782 295 aa3.38□□□□□ -1.87
PTM1YKL039W YHR177WP38867 453 aa3.38□□□□□ -1.87
PTM1YKL039W PFS1P38872 237 aa3.38□□□□□ -1.87
PTM1YKL039W SEO1P39709 593 aa3.38□□□□□ -1.87
PTM1YKL039W YEL075CP39972 122 aa3.38□□□□□ -1.87
PTM1YKL039W LCP5P40079 357 aaPredicted RBP3.38□□□□□ -1.87
PTM1YKL039W YER189WP40104 122 aa3.38□□□□□ -1.87
PTM1YKL039W BTT1P40314 149 aaPredicted RBP3.38□□□□□ -1.87
PTM1YKL039W YFL064CP43540 174 aa3.38□□□□□ -1.87
PTM1YKL039W FMP33P46998 180 aa3.38□□□□□ -1.87
PTM1YKL039W ASN2P49090 572 aaKnown RBP3.38□□□□□ -1.87
PTM1YKL039W YPS5P53057 165 aa3.38□□□□□ -1.87
PTM1YKL039W KRE28Q04431 385 aa3.38□□□□□ -1.87
PTM1YKL039W SMD2Q06217 110 aaKnown RBP3.38□□□□□ -1.87
PTM1YKL039W RLP24Q07915 199 aaKnown RBP3.38□□□□□ -1.87
PTM1YKL039W YBL111CQ3E7Y5 667 aa3.38□□□□□ -1.87
PTM1YKL039W RPL24AP04449 155 aaKnown RBP3.37□□□□□ -1.87
PTM1YKL039W YKR015CP36111 568 aa3.37□□□□□ -1.87
PTM1YKL039W KAP104P38217 918 aaKnown RBP3.37□□□□□ -1.87
PTM1YKL039W KEG1P43614 200 aa3.37□□□□□ -1.87
PTM1YKL039W SHE4P51534 789 aa3.37□□□□□ -1.87
PTM1YKL039W YIP5P53108 310 aa3.37□□□□□ -1.87
PTM1YKL039W NOP13P53883 403 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
PTM1YKL039W YNL040WP53960 456 aaPredicted RBP3.37□□□□□ -1.87
PTM1YKL039W TMA20P89886 181 aaPredicted RBP3.37□□□□□ -1.87
PTM1YKL039W ARR1Q06596 294 aa3.37□□□□□ -1.87
PTM1YKL039W MCT1Q12283 360 aa3.37□□□□□ -1.87
PTM1YKL039W FPR1P20081 114 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms