RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	SPT14	P32363	452 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	TIP20	P33891	701 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	OAR1	P35731	278 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	SPC34	P36131	295 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	TVP38	P36164	337 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	BIG1	P38813	335 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	YER130C	P39959	443 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	BAP3	P41815	604 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	PMT6	P42934	759 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	RPN11	P43588	306 aa	Known RBP	4.12	□□□□□ -1.75
AVT1	YJR001W	YAE1	P47118	141 aa	Predicted RBP	4.12	□□□□□ -1.75
AVT1	YJR001W	AZR1	P50080	613 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	YGL235W	P53071	178 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	YGR079W	P53249	370 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	SNO1	Q03144	224 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	IZH1	Q03419	316 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	COQ9	Q05779	260 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	CYK3	Q07533	885 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	TMS1	Q12116	473 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	PRP46	Q12417	451 aa	Predicted RBP	4.12	□□□□□ -1.75
AVT1	YJR001W	SPO24	Q3E752	67 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	RGS2	Q99188	309 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	DUR1,2	P32528	1835 aa	Known RBP	4.12	□□□□□ -1.75
AVT1	YJR001W	THP2	O13539	261 aa	Known RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	PET54	P10834	293 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	PDE1	P22434	369 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	MIR1	P23641	311 aa	Known RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	FPS1	P23900	669 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	CPR3	P25719	182 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	ECM25	P32525	599 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	YSC83	P32792	385 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	MRPL15	P36523	253 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	PRS4	P38063	326 aa	Predicted RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	YBR062C	P38239	180 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	RTC2	P38279	296 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	SHG1	P38337	142 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	LEU5	P38702	357 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	ARO9	P38840	513 aa	Predicted RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	YHR177W	P38867	453 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	ELO1	P39540	310 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	UIP3	P39547	235 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	MAM33	P40513	266 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	PHB2	P50085	310 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	VPS73	P53142	486 aa	Known RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	MSC1	Q03104	513 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	YMR209C	Q03648	457 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	MDM30	Q05930	598 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	RIF2	Q06208	395 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	TPO1	Q07824	586 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	YOR365C	Q08844	703 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	DGK1	Q12382	290 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	RIP1	P08067	215 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	SPE1	P08432	466 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	NAR1	P23503	491 aa	Known RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	GPI12	P23797	304 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	DEG1	P31115	442 aa	Known RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	STE14	P32584	239 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	LHP1	P33399	275 aa	Known RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	CBT1	P36038	271 aa	Predicted RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	YPK3	P38070	525 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	WSC4	P38739	605 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	MOG1	P47123	218 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	CTH1	P47976	325 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	MSY1	P48527	492 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	COG5	P53951	403 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	YNL040W	P53960	456 aa	Predicted RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	SLG1	P54867	378 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	NAM8	Q00539	523 aa	Known RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	RPS15	Q01855	142 aa	Known RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	YPL113C	Q02961	396 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	DUS4	Q06063	367 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	SHS1	Q07657	551 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	DAP1	Q12091	152 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	PER33	Q12144	273 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	TPT1	Q12272	230 aa	Known RBP	4.11	□□□□□ -1.75
AVT1	YJR001W	HRT3	Q12347	344 aa		4.11	□□□□□ -1.75
AVT1	YJR001W	ADH2	P00331	348 aa	Known RBP	4.1	□□□□□ -1.75
AVT1	YJR001W	YPT1	P01123	206 aa	Known RBP	4.1	□□□□□ -1.75
AVT1	YJR001W	ADE4	P04046	510 aa	Known RBP	4.1	□□□□□ -1.75
AVT1	YJR001W	CDC7	P06243	507 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	ATP1	P07251	545 aa	Known RBP	4.1	□□□□□ -1.75
AVT1	YJR001W	RPS4A	P0CX35	261 aa	Known RBP	4.1	□□□□□ -1.75
AVT1	YJR001W	RPS4B	P0CX36	261 aa	Known RBP	4.1	□□□□□ -1.75
AVT1	YJR001W	RPS16A	P0CX51	143 aa	Known RBP	4.1	□□□□□ -1.75
AVT1	YJR001W	RPS16B	P0CX52	143 aa	Known RBP	4.1	□□□□□ -1.75
AVT1	YJR001W	RGT1	P32862	1170 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	SKT5	P34226	696 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	GMH1	P36125	273 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	KAE1	P36132	386 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	QDR3	P38227	689 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	YBR220C	P38318	560 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	ERG28	P40030	148 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	RIP-Chip
AVT1	YJR001W	GUF1	P46943	645 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	YDL186W	P48568	277 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	SOL1	P50278	321 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	FHN1	P53279	174 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	YNR062C	P53748	327 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	NRK1	P53915	240 aa		4.1	□□□□□ -1.75
AVT1	YJR001W	YDR387C	Q04162	555 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms