RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C VAC7P53950 1165 aa2.83□□□□□ -1.96
ATG27YJL178C YNL010WP53981 241 aaKnown RBP2.83□□□□□ -1.96
ATG27YJL178C LSM3P57743 89 aaKnown RBP2.83□□□□□ -1.96
ATG27YJL178C CDC14Q00684 551 aa2.83□□□□□ -1.96
ATG27YJL178C RMI1Q02685 241 aa2.83□□□□□ -1.96
ATG27YJL178C PEX25Q02969 394 aa2.83□□□□□ -1.96
ATG27YJL178C RPN9Q04062 393 aaKnown RBP2.83□□□□□ -1.96
ATG27YJL178C SEC10Q06245 871 aa2.83□□□□□ -1.96
ATG27YJL178C BCP1Q06338 283 aa2.83□□□□□ -1.96
ATG27YJL178C APC5Q08683 685 aa2.83□□□□□ -1.96
ATG27YJL178C FDH1Q08911 376 aa2.83□□□□□ -1.96
ATG27YJL178C PGC1Q08959 321 aa2.83□□□□□ -1.96
ATG27YJL178C SRL2Q12020 392 aa2.83□□□□□ -1.96
ATG27YJL178C YRM1Q12340 786 aa2.83□□□□□ -1.96
ATG27YJL178C YKL018C-AQ3E7A7 99 aa2.83□□□□□ -1.96
ATG27YJL178C ATP1P07251 545 aaKnown RBP2.82□□□□□ -1.96
ATG27YJL178C MRPL8P22353 238 aa2.82□□□□□ -1.96
ATG27YJL178C CPR2P23285 205 aa2.82□□□□□ -1.96
ATG27YJL178C YCR090CP25654 182 aaKnown RBP2.82□□□□□ -1.96
ATG27YJL178C BUB2P26448 306 aaPredicted RBP2.82□□□□□ -1.96
ATG27YJL178C ZIP1P31111 875 aa2.82□□□□□ -1.96
ATG27YJL178C AEP1P32493 518 aa2.82□□□□□ -1.96
ATG27YJL178C IMP3P32899 183 aaPredicted RBP2.82□□□□□ -1.96
ATG27YJL178C PCF11P39081 626 aaPredicted RBP2.82□□□□□ -1.96
ATG27YJL178C TIM17P39515 158 aa2.82□□□□□ -1.96
ATG27YJL178C YHB1P39676 399 aaKnown RBP2.82□□□□□ -1.96
ATG27YJL178C SEC27P41811 889 aaKnown RBP2.82□□□□□ -1.96
ATG27YJL178C UFE1P41834 346 aa2.82□□□□□ -1.96
ATG27YJL178C BUD13P46947 266 aaPredicted RBP2.82□□□□□ -1.96
ATG27YJL178C FMP33P46998 180 aa2.82□□□□□ -1.96
ATG27YJL178C PRP24P49960 444 aaKnown RBP2.82□□□□□ -1.96
ATG27YJL178C BOL2P53082 120 aa2.82□□□□□ -1.96
ATG27YJL178C SHY1P53266 389 aa2.82□□□□□ -1.96
ATG27YJL178C CWC25P53854 179 aaKnown RBP2.82□□□□□ -1.96
ATG27YJL178C PET117Q02771 107 aa2.82□□□□□ -1.96
ATG27YJL178C PIR1Q03178 341 aa2.82□□□□□ -1.96
ATG27YJL178C HPT1Q04178 221 aaKnown RBP2.82□□□□□ -1.96
ATG27YJL178C WTM1Q12363 437 aaKnown RBP2.82□□□□□ -1.96
ATG27YJL178C MTR10Q99189 972 aa2.82□□□□□ -1.96
ATG27YJL178C VPS13Q07878 3144 aa2.82□□□□□ -1.96
ATG27YJL178C ATP6P00854 259 aa2.81□□□□□ -1.96
ATG27YJL178C DST1P07273 309 aa2.81□□□□□ -1.96
ATG27YJL178C HOM3P10869 527 aa2.81□□□□□ -1.96
ATG27YJL178C ARF2P19146 181 aaKnown RBP2.81□□□□□ -1.96
ATG27YJL178C CCA1P21269 546 aa2.81□□□□□ -1.96
ATG27YJL178C TFC1P32367 649 aa2.81□□□□□ -1.96
ATG27YJL178C VPH1P32563 840 aaKnown RBP2.81□□□□□ -1.96
ATG27YJL178C CSE1P33307 960 aa2.81□□□□□ -1.96
ATG27YJL178C SKT5P34226 696 aa2.81□□□□□ -1.96
ATG27YJL178C YKL097CP34245 136 aa2.81□□□□□ -1.96
ATG27YJL178C SRP72P38688 640 aaKnown RBP2.81□□□□□ -1.96
ATG27YJL178C EFM1P38732 585 aa2.81□□□□□ -1.96
ATG27YJL178C JLP2P40206 208 aa2.81□□□□□ -1.96
ATG27YJL178C VHS2P40463 436 aa2.81□□□□□ -1.96
ATG27YJL178C SEC28P40509 296 aaKnown RBP2.81□□□□□ -1.96
ATG27YJL178C GVP36P40531 326 aaKnown RBP2.81□□□□□ -1.96
ATG27YJL178C YRB1P41920 201 aaKnown RBP2.81□□□□□ -1.96
ATG27YJL178C YPT32P51996 222 aaKnown RBP2.81□□□□□ -1.96
ATG27YJL178C VEL1P53058 206 aa2.81□□□□□ -1.96
ATG27YJL178C EMC4P53073 190 aa2.81□□□□□ -1.96
ATG27YJL178C RHO5P53879 331 aaKnown RBP2.81□□□□□ -1.96
ATG27YJL178C SLM2P53955 656 aa2.81□□□□□ -1.96
ATG27YJL178C SPP2Q02521 185 aa2.81□□□□□ -1.96
ATG27YJL178C SKI8Q02793 397 aaPredicted RBP2.81□□□□□ -1.96
ATG27YJL178C DYN3Q04949 312 aa2.81□□□□□ -1.96
ATG27YJL178C BCH1Q05029 724 aa2.81□□□□□ -1.96
ATG27YJL178C LDB18Q07887 179 aa2.81□□□□□ -1.96
ATG27YJL178C YLR012CQ07927 99 aa2.81□□□□□ -1.96
ATG27YJL178C YOR342CQ12182 319 aa2.81□□□□□ -1.96
ATG27YJL178C RUP1Q12242 671 aa2.81□□□□□ -1.96
ATG27YJL178C YLR046CQ12253 270 aa2.81□□□□□ -1.96
ATG27YJL178C ATG34Q12292 412 aa2.81□□□□□ -1.96
ATG27YJL178C PEX11Q12462 236 aa2.81□□□□□ -1.96
ATG27YJL178C RRP36Q12481 300 aaPredicted RBP2.81□□□□□ -1.96
ATG27YJL178C ADF1Q2V2Q1 113 aa2.81□□□□□ -1.96
ATG27YJL178C MSF1P08425 469 aa2.8□□□□□ -1.96
ATG27YJL178C SCH9P11792 824 aaKnown RBP2.8□□□□□ -1.96
ATG27YJL178C NMT1P14743 455 aa2.8□□□□□ -1.96
ATG27YJL178C MDH1P17505 334 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
ATG27YJL178C UGA1P17649 471 aa2.8□□□□□ -1.96
ATG27YJL178C DBR1P24309 405 aaKnown RBP2.8□□□□□ -1.96
ATG27YJL178C CIN8P27895 1000 aa2.8□□□□□ -1.96
ATG27YJL178C POP5P28005 173 aa2.8□□□□□ -1.96
ATG27YJL178C VMA8P32610 256 aaKnown RBP2.8□□□□□ -1.96
ATG27YJL178C ASC1P38011 319 aaKnown RBP2.8□□□□□ -1.96
ATG27YJL178C LDB7P38210 180 aa2.8□□□□□ -1.96
ATG27YJL178C ZTA1P38230 334 aaKnown RBP2.8□□□□□ -1.96
ATG27YJL178C STP2P38704 541 aa2.8□□□□□ -1.96
ATG27YJL178C FAD1P38913 306 aa2.8□□□□□ -1.96
ATG27YJL178C RIO2P40160 425 aaKnown RBP2.8□□□□□ -1.96
ATG27YJL178C BTT1P40314 149 aaPredicted RBP2.8□□□□□ -1.96
ATG27YJL178C FMP32P43557 207 aa2.8□□□□□ -1.96
ATG27YJL178C SFH5P47008 294 aa2.8□□□□□ -1.96
ATG27YJL178C TOM22P49334 152 aa2.8□□□□□ -1.96
ATG27YJL178C CLD1P53264 445 aa2.8□□□□□ -1.96
ATG27YJL178C GTR2P53290 341 aa2.8□□□□□ -1.96
ATG27YJL178C NOP19P53317 196 aaPredicted RBP2.8□□□□□ -1.96
ATG27YJL178C YNL033WP53964 284 aa2.8□□□□□ -1.96
ATG27YJL178C YNL019CP53975 284 aa2.8□□□□□ -1.96
ATG27YJL178C YMR111CQ04461 462 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms