RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C RPB8P20436 146 aa8.74□□□□□ -1.01
MET28YIR017C MRPS28P21771 286 aa8.74□□□□□ -1.01
MET28YIR017C SCO1P23833 295 aa8.74□□□□□ -1.01
MET28YIR017C RPS5P26783 225 aaKnown RBP8.74□□□□□ -1.01
MET28YIR017C ATS1P31386 333 aa8.74□□□□□ -1.01
MET28YIR017C MDH3P32419 343 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
MET28YIR017C CHK1P38147 527 aa8.74□□□□□ -1.01
MET28YIR017C MLH1P38920 769 aa8.74□□□□□ -1.01
MET28YIR017C YER184CP39961 794 aa8.74□□□□□ -1.01
MET28YIR017C BUR6P40096 142 aa8.74□□□□□ -1.01
MET28YIR017C NTA1P40354 457 aa8.74□□□□□ -1.01
MET28YIR017C RBL2P48606 106 aaKnown RBP8.74□□□□□ -1.01
MET28YIR017C YGR126WP53274 230 aa8.74□□□□□ -1.01
MET28YIR017C SRP1Q02821 542 aaKnown RBP8.74□□□□□ -1.01
MET28YIR017C SCS7Q03529 384 aa8.74□□□□□ -1.01
MET28YIR017C YMR087WQ04299 284 aa8.74□□□□□ -1.01
MET28YIR017C YMR315WQ04869 349 aaKnown RBP8.74□□□□□ -1.01
MET28YIR017C YLR346CQ06139 101 aa8.74□□□□□ -1.01
MET28YIR017C HRT1Q08273 121 aa8.74□□□□□ -1.01
MET28YIR017C YPL272CQ08984 517 aa8.74□□□□□ -1.01
MET28YIR017C YOR343CQ12484 108 aa8.74□□□□□ -1.01
MET28YIR017C VCX1Q99385 411 aa8.74□□□□□ -1.01
MET28YIR017C GLT1Q12680 2145 aaKnown RBP8.74□□□□□ -1.01
MET28YIR017C MET2P08465 486 aa8.73□□□□□ -1.01
MET28YIR017C ENA1P13587 1091 aa8.73□□□□□ -1.01
MET28YIR017C NDC1P32500 655 aa8.73□□□□□ -1.01
MET28YIR017C SUR1P33300 382 aa8.73□□□□□ -1.01
MET28YIR017C VBA2P38358 474 aaKnown RBP8.73□□□□□ -1.01
MET28YIR017C YEL057CP39983 233 aa8.73□□□□□ -1.01
MET28YIR017C POP1P41812 875 aa8.73□□□□□ -1.01
MET28YIR017C VNX1P42839 908 aa8.73□□□□□ -1.01
MET28YIR017C YGR066CP53242 292 aa8.73□□□□□ -1.01
MET28YIR017C ENA2Q01896 1091 aa8.73□□□□□ -1.01
MET28YIR017C NUP49Q02199 472 aa8.73□□□□□ -1.01
MET28YIR017C NUP116Q02630 1113 aa8.73□□□□□ -1.01
MET28YIR017C NEJ1Q06148 342 aa8.73□□□□□ -1.01
MET28YIR017C EMG1Q06287 252 aaKnown RBP8.73□□□□□ -1.01
MET28YIR017C GSH2Q08220 491 aa8.73□□□□□ -1.01
MET28YIR017C ENA5Q12691 1091 aa8.73□□□□□ -1.01
MET28YIR017C RAS1P01119 309 aa8.72□□□□□ -1.01
MET28YIR017C PBS2P08018 668 aa8.72□□□□□ -1.01
MET28YIR017C YGL041W-AP0C5N3 154 aa8.72□□□□□ -1.01
MET28YIR017C SEC12P11655 471 aa8.72□□□□□ -1.01
MET28YIR017C STE12P13574 688 aa8.72□□□□□ -1.01
MET28YIR017C CTA1P15202 515 aa8.72□□□□□ -1.01
MET28YIR017C UTR1P21373 530 aa8.72□□□□□ -1.01
MET28YIR017C GAS1P22146 559 aaKnown RBP8.72□□□□□ -1.01
MET28YIR017C NFS1P25374 497 aa8.72□□□□□ -1.01
MET28YIR017C PAD1P33751 242 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
MET28YIR017C MRPL16P38064 232 aa8.72□□□□□ -1.01
MET28YIR017C PHO90P39535 881 aa8.72□□□□□ -1.01
MET28YIR017C AIM10P39965 576 aaKnown RBP8.72□□□□□ -1.01
MET28YIR017C HIS6P40545 261 aa8.72□□□□□ -1.01
MET28YIR017C SFH5P47008 294 aa8.72□□□□□ -1.01
MET28YIR017C LYS5P50113 272 aa8.72□□□□□ -1.01
MET28YIR017C BRR6P53062 197 aa8.72□□□□□ -1.01
MET28YIR017C YPR147CQ06522 304 aaKnown RBP8.72□□□□□ -1.01
MET28YIR017C ERG9P29704 444 aa8.71□□□□□ -1.02
MET28YIR017C YME2P32843 850 aa8.71□□□□□ -1.02
MET28YIR017C RFC4P40339 323 aaKnown RBP8.71□□□□□ -1.02
MET28YIR017C FDC1Q03034 503 aa8.71□□□□□ -1.02
MET28YIR017C VBA4Q04602 768 aaKnown RBP8.71□□□□□ -1.02
MET28YIR017C YDL218WQ07629 317 aa8.71□□□□□ -1.02
MET28YIR017C CBP6P07253 162 aaPredicted RBP8.7□□□□□ -1.02
MET28YIR017C MDH1P17505 334 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
MET28YIR017C MDH2P22133 377 aa8.7□□□□□ -1.02
MET28YIR017C YKR015CP36111 568 aa8.7□□□□□ -1.02
MET28YIR017C MAL32P38158 584 aa8.7□□□□□ -1.02
MET28YIR017C SHE1P38200 338 aa8.7□□□□□ -1.02
MET28YIR017C IES5P40060 125 aa8.7□□□□□ -1.02
MET28YIR017C YIL169CP40442 995 aa8.7□□□□□ -1.02
MET28YIR017C RPN14P53196 417 aa8.7□□□□□ -1.02
MET28YIR017C MAL12P53341 584 aa8.7□□□□□ -1.02
MET28YIR017C TAZ1Q06510 381 aa8.7□□□□□ -1.02
MET28YIR017C NIP7Q08962 181 aaKnown RBP8.7□□□□□ -1.02
MET28YIR017C GRE1Q08969 168 aa8.7□□□□□ -1.02
MET28YIR017C RBD2Q12270 262 aa8.7□□□□□ -1.02
MET28YIR017C YGR161W-CQ3E744 92 aa8.7□□□□□ -1.02
MET28YIR017C NFT1P0CE68 1218 aa8.69□□□□□ -1.02
MET28YIR017C FPS1P23900 669 aa8.69□□□□□ -1.02
MET28YIR017C YCL002CP25565 263 aa8.69□□□□□ -1.02
MET28YIR017C COS9P36034 407 aa8.69□□□□□ -1.02
MET28YIR017C BAP2P38084 609 aa8.69□□□□□ -1.02
MET28YIR017C DDI1P40087 428 aa8.69□□□□□ -1.02
MET28YIR017C NAS2P40555 220 aa8.69□□□□□ -1.02
MET28YIR017C PRY1P47032 299 aa8.69□□□□□ -1.02
MET28YIR017C EFM3P47163 339 aa8.69□□□□□ -1.02
MET28YIR017C PRP3Q03338 469 aaPredicted RBP8.69□□□□□ -1.02
MET28YIR017C YDR179W-AQ03983 463 aa8.69□□□□□ -1.02
MET28YIR017C MRX10Q05648 414 aa8.69□□□□□ -1.02
MET28YIR017C HRI1Q05905 244 aaKnown RBP8.69□□□□□ -1.02
MET28YIR017C MRPL51Q06090 140 aaPredicted RBP8.69□□□□□ -1.02
MET28YIR017C YDL114WQ07530 308 aa8.69□□□□□ -1.02
MET28YIR017C RKM1Q08961 583 aaPredicted RBP8.69□□□□□ -1.02
MET28YIR017C WSC3Q12215 556 aa8.69□□□□□ -1.02
MET28YIR017C PHO2P07269 559 aa8.68□□□□□ -1.02
MET28YIR017C TAL1P15019 335 aaKnown RBP8.68□□□□□ -1.02
MET28YIR017C THI4P32318 326 aa8.68□□□□□ -1.02
MET28YIR017C MCM10P32354 571 aa8.68□□□□□ -1.02
MET28YIR017C ECT1P33412 323 aa8.68□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms