RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W TUB1P09733 447 aaKnown RBP3.23□□□□□ -1.89
CAF130YGR134W SNF6P18888 332 aa3.23□□□□□ -1.89
CAF130YGR134W CSM1P25651 190 aa3.23□□□□□ -1.89
CAF130YGR134W IES6P32617 166 aa3.23□□□□□ -1.89
CAF130YGR134W MCH2P36032 473 aa3.23□□□□□ -1.89
CAF130YGR134W KAE1P36132 386 aa3.23□□□□□ -1.89
CAF130YGR134W DDI1P40087 428 aa3.23□□□□□ -1.89
CAF130YGR134W COG3P40094 801 aa3.23□□□□□ -1.89
CAF130YGR134W COX16P47081 118 aa3.23□□□□□ -1.89
CAF130YGR134W AZR1P50080 613 aa3.23□□□□□ -1.89
CAF130YGR134W COG2P53271 262 aa3.23□□□□□ -1.89
CAF130YGR134W YGR168CP53293 376 aa3.23□□□□□ -1.89
CAF130YGR134W SLD5Q03406 294 aa3.23□□□□□ -1.89
CAF130YGR134W HPF1Q05164 967 aa3.23□□□□□ -1.89
CAF130YGR134W SGT1Q08446 395 aa3.23□□□□□ -1.89
CAF130YGR134W USB1Q12208 290 aaKnown RBP3.23□□□□□ -1.89
CAF130YGR134W TEF1P02994 458 aaKnown RBP3.22□□□□□ -1.89
CAF130YGR134W YBR121C-AP0C5L4 52 aa3.22□□□□□ -1.89
CAF130YGR134W SSC1P0CS90 654 aaKnown RBP3.22□□□□□ -1.89
CAF130YGR134W YAP1P19880 650 aaKnown RBP3.22□□□□□ -1.89
CAF130YGR134W PUT3P25502 979 aaPredicted RBP3.22□□□□□ -1.89
CAF130YGR134W POF1P25576 258 aa3.22□□□□□ -1.89
CAF130YGR134W BMH1P29311 267 aaKnown RBP3.22□□□□□ -1.89
CAF130YGR134W NUP2P32499 720 aa3.22□□□□□ -1.89
CAF130YGR134W ELM1P32801 640 aa3.22□□□□□ -1.89
CAF130YGR134W FLO10P36170 1169 aa3.22□□□□□ -1.89
CAF130YGR134W HMT1P38074 348 aa3.22□□□□□ -1.89
CAF130YGR134W APD1P38281 316 aa3.22□□□□□ -1.89
CAF130YGR134W HAT2P39984 401 aa3.22□□□□□ -1.89
CAF130YGR134W CDH1P53197 566 aa3.22□□□□□ -1.89
CAF130YGR134W MSO1P53604 210 aaKnown RBP3.22□□□□□ -1.89
CAF130YGR134W SWS2P53937 143 aa3.22□□□□□ -1.89
CAF130YGR134W YPL014WQ02606 381 aa3.22□□□□□ -1.89
CAF130YGR134W TMN2Q04562 672 aa3.22□□□□□ -1.89
CAF130YGR134W BER1Q06688 274 aaKnown RBP3.22□□□□□ -1.89
CAF130YGR134W YDL009CQ12210 107 aa3.22□□□□□ -1.89
CAF130YGR134W FRE7Q12333 620 aa3.22□□□□□ -1.89
CAF130YGR134W AI5_BETAQ9ZZX0 354 aa3.22□□□□□ -1.89
CAF130YGR134W YMR085WP0CF18 432 aa3.22□□□□□ -1.89
CAF130YGR134W CBF1P17106 351 aa3.22□□□□□ -1.89
CAF130YGR134W ATG12P38316 186 aa3.22□□□□□ -1.89
CAF130YGR134W SOP4P39543 234 aaPredicted RBP3.22□□□□□ -1.89
CAF130YGR134W AGE2P40529 298 aa3.22□□□□□ -1.89
CAF130YGR134W RRT5P43607 289 aa3.22□□□□□ -1.89
CAF130YGR134W CTK3P46963 296 aaPredicted RBP3.22□□□□□ -1.89
CAF130YGR134W TPS1Q00764 495 aaKnown RBP3.22□□□□□ -1.89
CAF130YGR134W RNY1Q02933 434 aaKnown RBP3.22□□□□□ -1.89
CAF130YGR134W EBS1Q03466 884 aaKnown RBP3.22□□□□□ -1.89
CAF130YGR134W TRS23Q03784 219 aa3.22□□□□□ -1.89
CAF130YGR134W RRP17Q04031 235 aaPredicted RBP3.22□□□□□ -1.89
CAF130YGR134W THI3Q07471 609 aa3.22□□□□□ -1.89
CAF130YGR134W ARP6Q12509 438 aa3.22□□□□□ -1.89
CAF130YGR134W LIP5P32875 414 aa3.21□□□□□ -1.89
CAF130YGR134W CLG1P35190 452 aa3.21□□□□□ -1.89
CAF130YGR134W MCR1P36060 302 aaKnown RBP3.21□□□□□ -1.89
CAF130YGR134W EDC3P39998 551 aaKnown RBP3.21□□□□□ -1.89
CAF130YGR134W BMT5P40493 336 aa3.21□□□□□ -1.89
CAF130YGR134W LSM1P47017 172 aaKnown RBP3.21□□□□□ -1.89
CAF130YGR134W LIF1P53150 421 aa3.21□□□□□ -1.89
CAF130YGR134W PEX31P53203 462 aa3.21□□□□□ -1.89
CAF130YGR134W YLR460CP54007 376 aa3.21□□□□□ -1.89
CAF130YGR134W MRS2Q01926 470 aa3.21□□□□□ -1.89
CAF130YGR134W SHS1Q07657 551 aa3.21□□□□□ -1.89
CAF130YGR134W HTB1P02293 131 aaKnown RBP3.21□□□□□ -1.9
CAF130YGR134W HTB2P02294 131 aa3.21□□□□□ -1.9
CAF130YGR134W SPT3P06844 337 aa3.21□□□□□ -1.9
CAF130YGR134W PPR1P07272 904 aaPredicted RBP3.21□□□□□ -1.9
CAF130YGR134W VMA5P31412 392 aaKnown RBP3.21□□□□□ -1.9
CAF130YGR134W CDC13P32797 924 aaKnown RBP3.21□□□□□ -1.9
CAF130YGR134W YMR262WP38430 313 aa3.21□□□□□ -1.9
CAF130YGR134W LNP1P38878 278 aa3.21□□□□□ -1.9
CAF130YGR134W IBA57P47158 497 aa3.21□□□□□ -1.9
CAF130YGR134W MNN10P50108 393 aaKnown RBP3.21□□□□□ -1.9
CAF130YGR134W YGL159WP53110 370 aa3.21□□□□□ -1.9
CAF130YGR134W LSG1P53145 640 aaKnown RBP3.21□□□□□ -1.9
CAF130YGR134W MAL13P53338 473 aa3.21□□□□□ -1.9
CAF130YGR134W POX1P13711 748 aa3.21□□□□□ -1.9
CAF130YGR134W MTF1P14908 341 aaKnown RBP3.21□□□□□ -1.9
CAF130YGR134W SEN2P16658 377 aa3.21□□□□□ -1.9
CAF130YGR134W ARF2P19146 181 aaKnown RBP3.21□□□□□ -1.9
CAF130YGR134W YSR3P23501 404 aa3.21□□□□□ -1.9
CAF130YGR134W DPB2P24482 689 aaPredicted RBP3.21□□□□□ -1.9
CAF130YGR134W RAD5P32849 1169 aaPredicted RBP3.21□□□□□ -1.9
CAF130YGR134W YKL071WP36086 256 aa3.21□□□□□ -1.9
CAF130YGR134W AIM3P38266 947 aaKnown RBP3.21□□□□□ -1.9
CAF130YGR134W YBR137WP38276 179 aa3.21□□□□□ -1.9
CAF130YGR134W SER33P40510 469 aa3.21□□□□□ -1.9
CAF130YGR134W PMT6P42934 759 aa3.21□□□□□ -1.9
CAF130YGR134W OST3P48439 350 aa3.21□□□□□ -1.9
CAF130YGR134W DUG3P53871 357 aa3.21□□□□□ -1.9
CAF130YGR134W YPL080CQ02826 108 aa3.21□□□□□ -1.9
CAF130YGR134W ARO80Q04052 950 aa3.21□□□□□ -1.9
CAF130YGR134W SPC2Q04969 178 aa3.21□□□□□ -1.9
CAF130YGR134W SNA4Q07549 140 aa3.21□□□□□ -1.9
CAF130YGR134W MED7Q08278 222 aa3.21□□□□□ -1.9
CAF130YGR134W UTP23Q12339 254 aaKnown RBP3.21□□□□□ -1.9
CAF130YGR134W ARF1P11076 181 aaKnown RBP3.2□□□□□ -1.9
CAF130YGR134W VPS1P21576 704 aaKnown RBP3.2□□□□□ -1.9
CAF130YGR134W YCR007CP25354 239 aa3.2□□□□□ -1.9
CAF130YGR134W AIM24P47127 394 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms