RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W YPR053CQ6Q5F3 151 aa3.72□□□□□ -1.81
PTR3YFR029W RPL31AP0C2H8 113 aaKnown RBP3.71□□□□□ -1.81
PTR3YFR029W SPO12P17123 173 aa3.71□□□□□ -1.81
PTR3YFR029W ARF2P19146 181 aaKnown RBP3.71□□□□□ -1.81
PTR3YFR029W EXO70P19658 623 aa3.71□□□□□ -1.81
PTR3YFR029W PHO80P20052 293 aa3.71□□□□□ -1.81
PTR3YFR029W SAC1P32368 623 aaKnown RBP3.71□□□□□ -1.81
PTR3YFR029W APE2P32454 952 aaKnown RBP3.71□□□□□ -1.81
PTR3YFR029W CAF4P36130 643 aa3.71□□□□□ -1.81
PTR3YFR029W MMF1P40185 145 aaKnown RBP3.71□□□□□ -1.81
PTR3YFR029W GDS1P41913 522 aa3.71□□□□□ -1.81
PTR3YFR029W COS4P43542 379 aa3.71□□□□□ -1.81
PTR3YFR029W CIN2P46670 268 aa3.71□□□□□ -1.81
PTR3YFR029W APS3P47064 194 aa3.71□□□□□ -1.81
PTR3YFR029W SMM1P53720 384 aaKnown RBP3.71□□□□□ -1.81
PTR3YFR029W GOR1P53839 350 aa3.71□□□□□ -1.81
PTR3YFR029W ASI1P54074 624 aa3.71□□□□□ -1.81
PTR3YFR029W KIN4Q01919 800 aa3.71□□□□□ -1.81
PTR3YFR029W YMR166CQ03829 368 aa3.71□□□□□ -1.81
PTR3YFR029W ARC18Q05933 178 aaKnown RBP3.71□□□□□ -1.81
PTR3YFR029W RFU1Q08003 200 aa3.71□□□□□ -1.81
PTR3YFR029W SKI7Q08491 747 aaPredicted RBP3.71□□□□□ -1.81
PTR3YFR029W RSA1Q08932 381 aa3.71□□□□□ -1.81
PTR3YFR029W POM33Q12164 279 aa3.71□□□□□ -1.81
PTR3YFR029W USB1Q12208 290 aaKnown RBP3.71□□□□□ -1.81
PTR3YFR029W RGT2Q12300 763 aa3.71□□□□□ -1.81
PTR3YFR029W ORT1Q12375 292 aa3.71□□□□□ -1.81
PTR3YFR029W EMP46Q12396 444 aa3.71□□□□□ -1.81
PTR3YFR029W ALG7P07286 448 aa3.71□□□□□ -1.82
PTR3YFR029W CUP2P15315 225 aa3.71□□□□□ -1.82
PTR3YFR029W RNA15P25299 296 aaPredicted RBP3.71□□□□□ -1.82
PTR3YFR029W QRI5P32344 111 aa3.71□□□□□ -1.82
PTR3YFR029W MDH3P32419 343 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
PTR3YFR029W SGE1P33335 543 aa3.71□□□□□ -1.82
PTR3YFR029W THI80P35202 319 aa3.71□□□□□ -1.82
PTR3YFR029W YKR041WP36134 250 aa3.71□□□□□ -1.82
PTR3YFR029W ATG12P38316 186 aa3.71□□□□□ -1.82
PTR3YFR029W RPL10P41805 221 aaKnown RBP3.71□□□□□ -1.82
PTR3YFR029W MNN10P50108 393 aaKnown RBP3.71□□□□□ -1.82
PTR3YFR029W SBH2P52871 88 aa3.71□□□□□ -1.82
PTR3YFR029W JAC1P53193 184 aa3.71□□□□□ -1.82
PTR3YFR029W PCP1P53259 346 aa3.71□□□□□ -1.82
PTR3YFR029W YPL014WQ02606 381 aa3.71□□□□□ -1.82
PTR3YFR029W MED7Q08278 222 aa3.71□□□□□ -1.82
PTR3YFR029W SGT1Q08446 395 aa3.71□□□□□ -1.82
PTR3YFR029W YLR053CQ12026 108 aa3.71□□□□□ -1.82
PTR3YFR029W JLP1Q12358 412 aa3.71□□□□□ -1.82
PTR3YFR029W DCN1Q12395 269 aa3.71□□□□□ -1.82
PTR3YFR029W RAD50P12753 1312 aa3.71□□□□□ -1.82
PTR3YFR029W TPK3P05986 398 aa3.7□□□□□ -1.82
PTR3YFR029W TRR1P29509 319 aaKnown RBP3.7□□□□□ -1.82
PTR3YFR029W HOM6P31116 359 aaKnown RBP3.7□□□□□ -1.82
PTR3YFR029W PMT2P31382 759 aa3.7□□□□□ -1.82
PTR3YFR029W SPS18P32572 300 aa3.7□□□□□ -1.82
PTR3YFR029W SUL1P38359 859 aa3.7□□□□□ -1.82
PTR3YFR029W VMA22P38784 181 aa3.7□□□□□ -1.82
PTR3YFR029W FAU1P40099 211 aa3.7□□□□□ -1.82
PTR3YFR029W PEX31P53203 462 aa3.7□□□□□ -1.82
PTR3YFR029W CPD1P53314 239 aa3.7□□□□□ -1.82
PTR3YFR029W MAL13P53338 473 aa3.7□□□□□ -1.82
PTR3YFR029W HNT3Q08702 217 aa3.7□□□□□ -1.82
PTR3YFR029W YDL009CQ12210 107 aa3.7□□□□□ -1.82
PTR3YFR029W SFM1Q12314 213 aa3.7□□□□□ -1.82
PTR3YFR029W AHA1Q12449 350 aaKnown RBP3.7□□□□□ -1.82
PTR3YFR029W SEC3P33332 1336 aaKnown RBP3.7□□□□□ -1.82
PTR3YFR029W DPM1P14020 267 aaKnown RBP3.7□□□□□ -1.82
PTR3YFR029W CDC10P25342 322 aaKnown RBP3.7□□□□□ -1.82
PTR3YFR029W ZRT1P32804 376 aa3.7□□□□□ -1.82
PTR3YFR029W EXO1P39875 702 aa3.7□□□□□ -1.82
PTR3YFR029W COX15P40086 486 aa3.7□□□□□ -1.82
PTR3YFR029W HMS2P47175 358 aa3.7□□□□□ -1.82
PTR3YFR029W MIC26P50087 233 aa3.7□□□□□ -1.82
PTR3YFR029W CPR8P53728 308 aa3.7□□□□□ -1.82
PTR3YFR029W COS1P53822 381 aa3.7□□□□□ -1.82
PTR3YFR029W NRK1P53915 240 aa3.7□□□□□ -1.82
PTR3YFR029W YPL077CQ02831 240 aa3.7□□□□□ -1.82
PTR3YFR029W TRM82Q03774 444 aa3.7□□□□□ -1.82
PTR3YFR029W YNG1Q08465 219 aa3.7□□□□□ -1.82
PTR3YFR029W YOR114WQ12219 294 aa3.7□□□□□ -1.82
PTR3YFR029W SIR4P11978 1358 aa3.69□□□□□ -1.82
PTR3YFR029W TPI1P00942 248 aaKnown RBP3.69□□□□□ -1.82
PTR3YFR029W DCC1P25559 380 aa3.69□□□□□ -1.82
PTR3YFR029W ROT2P38138 954 aa3.69□□□□□ -1.82
PTR3YFR029W YPC1P38298 316 aa3.69□□□□□ -1.82
PTR3YFR029W DHH1P39517 506 aaKnown RBP3.69□□□□□ -1.82
PTR3YFR029W BDH1P39714 382 aa3.69□□□□□ -1.82
PTR3YFR029W PAC2P39937 518 aa3.69□□□□□ -1.82
PTR3YFR029W MDV1P47025 714 aa3.69□□□□□ -1.82
PTR3YFR029W YJR054WP47114 497 aa3.69□□□□□ -1.82
PTR3YFR029W YDR209CQ03480 137 aa3.69□□□□□ -1.82
PTR3YFR029W PRM6Q04705 352 aa3.69□□□□□ -1.82
PTR3YFR029W NSL1Q12143 216 aa3.69□□□□□ -1.82
PTR3YFR029W MEX67Q99257 599 aaKnown RBP3.69□□□□□ -1.82
PTR3YFR029W RPL7AP05737 244 aaKnown RBP3.68□□□□□ -1.82
PTR3YFR029W RPL20AP0CX23 172 aaKnown RBP3.68□□□□□ -1.82
PTR3YFR029W RPL20BP0CX24 172 aaPredicted RBP3.68□□□□□ -1.82
PTR3YFR029W PET54P10834 293 aa3.68□□□□□ -1.82
PTR3YFR029W BUB3P26449 341 aa3.68□□□□□ -1.82
PTR3YFR029W ACB1P31787 87 aa3.68□□□□□ -1.82
PTR3YFR029W CAT2P32796 670 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms