RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	EDE1	P34216	1381 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	YDR157W	A0A023PZE8	133 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	PTP1	P25044	335 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	CHA1	P25379	360 aa	Known RBP	4.12	□□□□□ -1.75
SPR28	YDR218C	MEI4	P29467	408 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	CDC13	P32797	924 aa	Known RBP	4.12	□□□□□ -1.75
SPR28	YDR218C	YKL097C	P34245	136 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	ECM15	P35195	104 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	RCK2	P38623	610 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	URA8	P38627	578 aa	Predicted RBP	4.12	□□□□□ -1.75
SPR28	YDR218C	ARN1	P38731	627 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	GEP4	P38812	185 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	YPT35	P38815	214 aa	Known RBP	4.12	□□□□□ -1.75
SPR28	YDR218C	PHO90	P39535	881 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	DFG10	P40526	253 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	ADO1	P47143	340 aa	Known RBP	4.12	□□□□□ -1.75
SPR28	YDR218C	TOS2	P50078	622 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	MRM2	P53123	320 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	YIP3	P53633	176 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	ASI3	P53983	676 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	STP1	Q00947	519 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	CSM3	Q04659	317 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	MHR1	Q06630	226 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	HEM25	Q07534	307 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	MUM3	Q08750	479 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	YOR114W	Q12219	294 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	RKM5	Q12367	367 aa		4.12	□□□□□ -1.75
SPR28	YDR218C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SPR28	YDR218C	RPS3	P05750	240 aa	Known RBP	4.11	□□□□□ -1.75
SPR28	YDR218C	PET494	P07390	489 aa	Predicted RBP	4.11	□□□□□ -1.75
SPR28	YDR218C	NAM2	P11325	894 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	ZWF1	P11412	505 aa	Known RBP	4.11	□□□□□ -1.75
SPR28	YDR218C	SEN2	P16658	377 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	TRR1	P29509	319 aa	Known RBP	4.11	□□□□□ -1.75
SPR28	YDR218C	DEP1	P31385	405 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	KAR9	P32526	644 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	YEF1	P32622	495 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	TOA2	P32774	122 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	HOT13	P36078	116 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	SHG1	P38337	142 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	YAP3	P38749	330 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	VMA22	P38784	181 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	SHC1	P39000	512 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	EXO1	P39875	702 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	YNL320W	P42840	284 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	YFL040W	P43562	540 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	YJL016W	P47072	561 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	YJR141W	P47172	347 aa	Predicted RBP	4.11	□□□□□ -1.75
SPR28	YDR218C	MST27	P53176	234 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	IBD2	P53892	351 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	SLD5	Q03406	294 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	YMR010W	Q03687	405 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	YMR034C	Q05131	434 aa	Predicted RBP	4.11	□□□□□ -1.75
SPR28	YDR218C	ARC18	Q05933	178 aa	Known RBP	4.11	□□□□□ -1.75
SPR28	YDR218C	YPL199C	Q08954	240 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	UTP23	Q12339	254 aa	Known RBP	4.11	□□□□□ -1.75
SPR28	YDR218C	DCN1	Q12395	269 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	YCL012C	Q8J0M4	134 aa		4.11	□□□□□ -1.75
SPR28	YDR218C	RPL31A	P0C2H8	113 aa	Known RBP	4.1	□□□□□ -1.75
SPR28	YDR218C	NUF2	P33895	451 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	FRE2	P36033	711 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	ANR2	P36090	516 aa	Predicted RBP	4.1	□□□□□ -1.75
SPR28	YDR218C	RFT1	P38206	574 aa	Predicted RBP	4.1	□□□□□ -1.75
SPR28	YDR218C	BMT2	P38278	337 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	YHK8	P38776	514 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	ERV46	P39727	415 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	YER184C	P39961	794 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	AGE2	P40529	298 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	YIR016W	P40572	265 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	CIN2	P46670	268 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	YJR079W	P47126	109 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	PRP24	P49960	444 aa	Known RBP	4.1	□□□□□ -1.75
SPR28	YDR218C	MIC26	P50087	233 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	NBP1	P52919	319 aa	Predicted RBP	4.1	□□□□□ -1.75
SPR28	YDR218C	YGR042W	P53227	271 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	GTR2	P53290	341 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	YNR048W	P53740	393 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	YNL234W	P53857	426 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	YNL095C	P53932	642 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	WTM1	Q12363	437 aa	Known RBP	4.1	□□□□□ -1.75
SPR28	YDR218C	TFC7	Q12415	435 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	YPR064W	Q12492	139 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	ARP6	Q12509	438 aa		4.1	□□□□□ -1.75
SPR28	YDR218C	PUT1	P09368	476 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	RPL20A	P0CX23	172 aa	Known RBP	4.09	□□□□□ -1.75
SPR28	YDR218C	RPL20B	P0CX24	172 aa	Predicted RBP	4.09	□□□□□ -1.75
SPR28	YDR218C	SLY1	P22213	666 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	CDC10	P25342	322 aa	Known RBP	4.09	□□□□□ -1.75
SPR28	YDR218C	YCR100C	P25606	316 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	ECM8	P38246	354 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	YER121W	P40076	114 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	YIL169C	P40442	995 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	YKE4	P40544	346 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	TIS11	P47977	285 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	SCS3	P53012	380 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	NIF3	P53081	288 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	SNX41	Q04053	625 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	DIC1	Q06143	298 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	YDL114W	Q07530	308 aa		4.09	□□□□□ -1.75
SPR28	YDR218C	ESA1	Q08649	445 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms