RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP42	YDR171W	TVP38	P36164	337 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	MRP21	P38175	177 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	VID24	P38263	362 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	RRP4	P38792	359 aa	Known RBP	3.88	□□□□□ -1.79
HSP42	YDR171W	NPR2	P39923	615 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	SPO73	P40031	143 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	RGI1	P40043	161 aa	Predicted RBP	3.88	□□□□□ -1.79
HSP42	YDR171W	COG3	P40094	801 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	ESL1	P40456	1118 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	MAF1	P41910	395 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	PTR3	P43606	678 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	LSM8	P47093	109 aa	Known RBP	3.88	□□□□□ -1.79
HSP42	YDR171W	PYK2	P52489	506 aa	Known RBP	3.88	□□□□□ -1.79
HSP42	YDR171W	NBP35	P52920	328 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	ERG26	P53199	349 aa	Known RBP	3.88	□□□□□ -1.79
HSP42	YDR171W	MKC7	P53379	596 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	EFM6	P53970	246 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	PRM15	Q03262	622 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	MZM1	Q03429	123 aa	Predicted RBP	3.88	□□□□□ -1.79
HSP42	YDR171W	YMD8	Q03697	442 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	RVB1	Q03940	463 aa	Known RBP	3.88	□□□□□ -1.79
HSP42	YDR171W	YMR254C	Q04838	102 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	MFB1	Q04922	465 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	LUC7	Q07508	261 aa	Predicted RBP	3.88	□□□□□ -1.79
HSP42	YDR171W	SHS1	Q07657	551 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	YPL272C	Q08984	517 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	BSC1	Q12140	328 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	MED4	Q12343	284 aa		3.88	□□□□□ -1.79
HSP42	YDR171W	TIM9	O74700	87 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	PET54	P10834	293 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	OCA4	P25366	362 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	YBL010C	P32788	280 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	RPS1A	P33442	255 aa	Known RBP	3.87	□□□□□ -1.79
HSP42	YDR171W	SKT5	P34226	696 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	MCR1	P36060	302 aa	Known RBP	3.87	□□□□□ -1.79
HSP42	YDR171W	VPS51	P36116	164 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	YHR054C	P38780	354 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	SBE22	P38814	852 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	UBA4	P38820	440 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	PHO90	P39535	881 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	YER184C	P39961	794 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	SWM2	P40342	146 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	YJL218W	P40892	196 aa	Known RBP	3.87	□□□□□ -1.79
HSP42	YDR171W	GAB1	P41733	394 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	GTO1	P48239	356 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	RPS12	P48589	143 aa	Known RBP	3.87	□□□□□ -1.79
HSP42	YDR171W	BOL2	P53082	120 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	LSM7	P53905	115 aa	Known RBP	3.87	□□□□□ -1.79
HSP42	YDR171W	SPP2	Q02521	185 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	NUP53	Q03790	475 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	YDR131C	Q03899	556 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	BUR2	Q05949	395 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	YLL007C	Q07799	665 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	YOL131W	Q08270	108 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	APC5	Q08683	685 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	GPM2	Q12008	311 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	AEP3	Q12089	606 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	SFG1	Q12507	346 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	YKL018C-A	Q3E7A7	99 aa		3.87	□□□□□ -1.79
HSP42	YDR171W	REP2	P03872	296 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	STE3	P06783	470 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	CHS1	P08004	1131 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	SPS2	P08459	502 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	SAM1	P10659	382 aa	Known RBP	3.86	□□□□□ -1.79
HSP42	YDR171W	BAR1	P12630	587 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	HNM1	P19807	563 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	PHO80	P20052	293 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	ERG9	P29704	444 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	RNP1	P32385	249 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	CPR5	P35176	225 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	UIP5	P36137	443 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	ICS2	P38284	255 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	COS8	P38723	381 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	RRF1	P38771	230 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	RCY1	P39531	840 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	PRM9	P39551	298 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	SEN34	P39707	275 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	YMR144W	P40214	342 aa	Known RBP	3.86	□□□□□ -1.79
HSP42	YDR171W	PRE6	P40303	254 aa	Known RBP	3.86	□□□□□ -1.79
HSP42	YDR171W	TIR3	P40552	269 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	GTT1	P40582	234 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	GDS1	P41913	522 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	PMT4	P46971	762 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	YAE1	P47118	141 aa	Predicted RBP	3.86	□□□□□ -1.79
HSP42	YDR171W	MRX6	P48564	524 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	HOS2	P53096	452 aa	Predicted RBP	3.86	□□□□□ -1.79
HSP42	YDR171W	MNP1	P53163	194 aa	Predicted RBP	3.86	□□□□□ -1.79
HSP42	YDR171W	PRM8	P53174	237 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	FMP48	P53233	369 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	HHO1	P53551	258 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	PET117	Q02771	107 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	YDR541C	Q03049	344 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	TDA1	Q03533	586 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	BNA7	Q04066	261 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	YDR124W	Q04608	324 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	YHC1	Q05900	231 aa	Known RBP	3.86	□□□□□ -1.79
HSP42	YDR171W	GRX8	Q05926	109 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	YLR352W	Q06479	807 aa		3.86	□□□□□ -1.79
HSP42	YDR171W	RRG7	Q08774	242 aa	Predicted RBP	3.86	□□□□□ -1.79
HSP42	YDR171W	SLF1	Q12034	447 aa	Known RBP	3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms