RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W MDH3P32419 343 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
SED1YDR077W MSN4P33749 630 aa8.63□□□□□ -1.03
SED1YDR077W MAL32P38158 584 aa8.63□□□□□ -1.03
SED1YDR077W RPP1P38786 293 aa8.63□□□□□ -1.03
SED1YDR077W PHO90P39535 881 aa8.63□□□□□ -1.03
SED1YDR077W AIM20P40451 204 aa8.63□□□□□ -1.03
SED1YDR077W SDP1P40479 209 aa8.63□□□□□ -1.03
SED1YDR077W ATG18P43601 500 aa8.63□□□□□ -1.03
SED1YDR077W IRC6P43615 237 aa8.63□□□□□ -1.03
SED1YDR077W SFH5P47008 294 aa8.63□□□□□ -1.03
SED1YDR077W RPA14P50106 137 aa8.63□□□□□ -1.03
SED1YDR077W VOA1P53262 265 aa8.63□□□□□ -1.03
SED1YDR077W MAL12P53341 584 aa8.63□□□□□ -1.03
SED1YDR077W MPP6P53725 186 aaPredicted RBP8.63□□□□□ -1.03
SED1YDR077W TDA1Q03533 586 aa8.63□□□□□ -1.03
SED1YDR077W CYK3Q07533 885 aa8.63□□□□□ -1.03
SED1YDR077W YDL176WQ12027 708 aa8.63□□□□□ -1.03
SED1YDR077W SFG1Q12507 346 aa8.63□□□□□ -1.03
SED1YDR077W SIR2P06700 562 aa8.62□□□□□ -1.03
SED1YDR077W TEC1P18412 486 aa8.62□□□□□ -1.03
SED1YDR077W PRE7P23724 241 aaKnown RBP8.62□□□□□ -1.03
SED1YDR077W VBA2P38358 474 aaKnown RBP8.62□□□□□ -1.03
SED1YDR077W MLH1P38920 769 aa8.62□□□□□ -1.03
SED1YDR077W BPL1P48445 690 aaPredicted RBP8.62□□□□□ -1.03
SED1YDR077W PAU12P53343 120 aa8.62□□□□□ -1.03
SED1YDR077W TRS23Q03784 219 aa8.62□□□□□ -1.03
SED1YDR077W TAZ1Q06510 381 aa8.62□□□□□ -1.03
SED1YDR077W GPN3Q06543 272 aa8.62□□□□□ -1.03
SED1YDR077W BRE4Q07660 1125 aa8.62□□□□□ -1.03
SED1YDR077W PEX27Q08580 376 aa8.62□□□□□ -1.03
SED1YDR077W RDR1Q08904 546 aa8.62□□□□□ -1.03
SED1YDR077W AKR2Q12013 749 aa8.62□□□□□ -1.03
SED1YDR077W RCN2Q12044 265 aa8.62□□□□□ -1.03
SED1YDR077W PIN2Q12057 282 aa8.62□□□□□ -1.03
SED1YDR077W FRE6Q12473 712 aa8.62□□□□□ -1.03
SED1YDR077W SET6Q12529 373 aa8.62□□□□□ -1.03
SED1YDR077W EXG1P23776 448 aaKnown RBP8.61□□□□□ -1.03
SED1YDR077W RAD51P25454 400 aa8.61□□□□□ -1.03
SED1YDR077W FUN19P28003 413 aaPredicted RBP8.61□□□□□ -1.03
SED1YDR077W HSP150P32478 413 aa8.61□□□□□ -1.03
SED1YDR077W RIB7P33312 244 aa8.61□□□□□ -1.03
SED1YDR077W WBP1P33767 430 aaKnown RBP8.61□□□□□ -1.03
SED1YDR077W SEF1P34228 1148 aa8.61□□□□□ -1.03
SED1YDR077W ZRT3P34240 503 aa8.61□□□□□ -1.03
SED1YDR077W MRPL16P38064 232 aa8.61□□□□□ -1.03
SED1YDR077W THI2P38141 450 aa8.61□□□□□ -1.03
SED1YDR077W MBA1P38300 278 aa8.61□□□□□ -1.03
SED1YDR077W IPI1P38803 334 aaPredicted RBP8.61□□□□□ -1.03
SED1YDR077W SER2P42941 309 aa8.61□□□□□ -1.03
SED1YDR077W YFR054CP43622 192 aa8.61□□□□□ -1.03
SED1YDR077W ECL1P48235 211 aa8.61□□□□□ -1.03
SED1YDR077W PPT1P53043 513 aa8.61□□□□□ -1.03
SED1YDR077W YAT1P80235 687 aa8.61□□□□□ -1.03
SED1YDR077W MRPL1Q04599 285 aa8.61□□□□□ -1.03
SED1YDR077W BUR2Q05949 395 aa8.61□□□□□ -1.03
SED1YDR077W UTP21Q06078 939 aaPredicted RBP8.61□□□□□ -1.03
SED1YDR077W IRC19Q07843 230 aa8.61□□□□□ -1.03
SED1YDR077W YOR376WQ08900 122 aa8.61□□□□□ -1.03
SED1YDR077W BTS1Q12051 335 aa8.61□□□□□ -1.03
SED1YDR077W YIL046W-AQ3E7Z4 54 aa8.61□□□□□ -1.03
SED1YDR077W BRR2P32639 2163 aaKnown RBP8.61□□□□□ -1.03
SED1YDR077W YPT1P01123 206 aaKnown RBP8.6□□□□□ -1.03
SED1YDR077W HMG1P12683 1054 aa8.6□□□□□ -1.03
SED1YDR077W AIM17P23180 465 aaKnown RBP8.6□□□□□ -1.03
SED1YDR077W FUN26P31381 517 aa8.6□□□□□ -1.03
SED1YDR077W PAU24P38155 120 aa8.6□□□□□ -1.03
SED1YDR077W YBR137WP38276 179 aa8.6□□□□□ -1.03
SED1YDR077W UBS1P38290 277 aa8.6□□□□□ -1.03
SED1YDR077W YHK8P38776 514 aa8.6□□□□□ -1.03
SED1YDR077W YNL208WP40159 199 aaKnown RBP8.6□□□□□ -1.03
SED1YDR077W NUP116Q02630 1113 aa8.6□□□□□ -1.03
SED1YDR077W PEX25Q02969 394 aa8.6□□□□□ -1.03
SED1YDR077W RSM24Q03976 319 aa8.6□□□□□ -1.03
SED1YDR077W PEX10Q05568 337 aa8.6□□□□□ -1.03
SED1YDR077W RGC1Q06108 1083 aaKnown RBP8.6□□□□□ -1.03
SED1YDR077W RRP9Q06506 573 aaKnown RBP8.6□□□□□ -1.03
SED1YDR077W HRT1Q08273 121 aa8.6□□□□□ -1.03
SED1YDR077W HNT3Q08702 217 aa8.6□□□□□ -1.03
SED1YDR077W YPR1Q12458 312 aa8.6□□□□□ -1.03
SED1YDR077W QCR7P00128 127 aa8.59□□□□□ -1.03
SED1YDR077W PEP4P07267 405 aaKnown RBP8.59□□□□□ -1.03
SED1YDR077W STE4P18851 423 aa8.59□□□□□ -1.03
SED1YDR077W RPA135P22138 1203 aaKnown RBP8.59□□□□□ -1.03
SED1YDR077W PUT3P25502 979 aaPredicted RBP8.59□□□□□ -1.03
SED1YDR077W VPS17P32913 551 aa8.59□□□□□ -1.03
SED1YDR077W PAD1P33751 242 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
SED1YDR077W SHE2P36068 246 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
SED1YDR077W YER184CP39961 794 aa8.59□□□□□ -1.03
SED1YDR077W PXR1P53335 271 aaPredicted RBP8.59□□□□□ -1.03
SED1YDR077W YDR249CQ03787 373 aa8.59□□□□□ -1.03
SED1YDR077W MRPL51Q06090 140 aaPredicted RBP8.59□□□□□ -1.03
SED1YDR077W AIM6Q07716 390 aa8.59□□□□□ -1.03
SED1YDR077W YOR378WQ08902 515 aa8.59□□□□□ -1.03
SED1YDR077W YLR099W-AQ3E798 87 aa8.59□□□□□ -1.03
SED1YDR077W CSF1Q12150 2958 aa8.58□□□□□ -1.04
SED1YDR077W MRP1P10662 321 aaKnown RBP8.58□□□□□ -1.04
SED1YDR077W CAP2P13517 287 aa8.58□□□□□ -1.04
SED1YDR077W RPB8P20436 146 aa8.58□□□□□ -1.04
SED1YDR077W GAS1P22146 559 aaKnown RBP8.58□□□□□ -1.04
SED1YDR077W PTC6P25646 442 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms