RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C SRO77P38163 1010 aa5.69□□□□□ -1.5
RGD1YBR260C MRP21P38175 177 aa5.69□□□□□ -1.5
RGD1YBR260C PFS2P42841 465 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C YJR056CP47115 236 aa5.69□□□□□ -1.5
RGD1YBR260C MDM34P53083 459 aa5.69□□□□□ -1.5
RGD1YBR260C MEP3P53390 489 aa5.69□□□□□ -1.5
RGD1YBR260C RIM13Q03792 727 aa5.69□□□□□ -1.5
RGD1YBR260C VBA4Q04602 768 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C RNH202Q05635 350 aa5.69□□□□□ -1.5
RGD1YBR260C YLR446WQ06204 433 aa5.69□□□□□ -1.5
RGD1YBR260C IZH3Q07959 543 aa5.69□□□□□ -1.5
RGD1YBR260C TYW1Q08960 810 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C PNO1Q99216 274 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C CDC9P04819 755 aa5.69□□□□□ -1.5
RGD1YBR260C HTA1P04911 132 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C FUR4P05316 633 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C AMD1P15274 810 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C SNF5P18480 905 aa5.69□□□□□ -1.5
RGD1YBR260C RFA1P22336 621 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C BUD5P25300 642 aaPredicted RBP5.69□□□□□ -1.5
RGD1YBR260C MRP17P28778 131 aa5.69□□□□□ -1.5
RGD1YBR260C PCS60P38137 543 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
RGD1YBR260C CTF8P38877 133 aa5.69□□□□□ -1.5
RGD1YBR260C ASP1P38986 381 aaPredicted RBP5.69□□□□□ -1.5
RGD1YBR260C PHO90P39535 881 aa5.69□□□□□ -1.5
RGD1YBR260C HAT2P39984 401 aa5.69□□□□□ -1.5
RGD1YBR260C GAT2P40209 560 aa5.69□□□□□ -1.5
RGD1YBR260C GLC8P41818 229 aa5.69□□□□□ -1.5
RGD1YBR260C IME4P41833 600 aa5.69□□□□□ -1.5
RGD1YBR260C LOH1P47055 219 aa5.69□□□□□ -1.5
RGD1YBR260C LYS5P50113 272 aa5.69□□□□□ -1.5
RGD1YBR260C SOL1P50278 321 aa5.69□□□□□ -1.5
RGD1YBR260C GIM3P53900 129 aa5.69□□□□□ -1.5
RGD1YBR260C CYT2Q00873 224 aa5.69□□□□□ -1.5
RGD1YBR260C MRP51Q02950 344 aa5.69□□□□□ -1.5
RGD1YBR260C YMR253CQ04835 414 aa5.69□□□□□ -1.5
RGD1YBR260C HRD3Q05787 833 aa5.69□□□□□ -1.5
RGD1YBR260C YLR346CQ06139 101 aa5.69□□□□□ -1.5
RGD1YBR260C FYV7Q12247 151 aa5.69□□□□□ -1.5
RGD1YBR260C INP53Q12271 1107 aa5.69□□□□□ -1.5
RGD1YBR260C AHA1Q12449 350 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C TMA17Q12513 150 aa5.69□□□□□ -1.5
RGD1YBR260C YNR034W-AQ3E841 98 aa5.69□□□□□ -1.5
RGD1YBR260C MEX67Q99257 599 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C RAS1P01119 309 aa5.68□□□□□ -1.5
RGD1YBR260C TFS1P14306 219 aa5.68□□□□□ -1.5
RGD1YBR260C PDX1P16451 410 aa5.68□□□□□ -1.5
RGD1YBR260C AAR2P32357 355 aaPredicted RBP5.68□□□□□ -1.5
RGD1YBR260C CLB6P32943 380 aa5.68□□□□□ -1.5
RGD1YBR260C MTH1P35198 433 aa5.68□□□□□ -1.5
RGD1YBR260C ADD66P36040 267 aa5.68□□□□□ -1.5
RGD1YBR260C YBR053CP38235 358 aa5.68□□□□□ -1.5
RGD1YBR260C VID24P38263 362 aa5.68□□□□□ -1.5
RGD1YBR260C RRP3P38712 501 aaKnown RBP5.68□□□□□ -1.5
RGD1YBR260C RPS10BP46784 105 aaKnown RBP5.68□□□□□ -1.5
RGD1YBR260C CSN12P47130 423 aa5.68□□□□□ -1.5
RGD1YBR260C TIS11P47977 285 aa5.68□□□□□ -1.5
RGD1YBR260C KXD1P53158 218 aa5.68□□□□□ -1.5
RGD1YBR260C SYF2P53277 215 aaPredicted RBP5.68□□□□□ -1.5
RGD1YBR260C IGO1P53897 168 aa5.68□□□□□ -1.5
RGD1YBR260C KTR6P54070 446 aa5.68□□□□□ -1.5
RGD1YBR260C YPL067CQ02754 198 aa5.68□□□□□ -1.5
RGD1YBR260C SHH3Q04487 196 aa5.68□□□□□ -1.5
RGD1YBR260C MRX9Q07349 420 aaKnown RBP5.68□□□□□ -1.5
RGD1YBR260C CRT10Q08226 957 aa5.68□□□□□ -1.5
RGD1YBR260C RPS10AQ08745 105 aaPredicted RBP5.68□□□□□ -1.5
RGD1YBR260C LAA1P39526 2014 aa5.68□□□□□ -1.5
RGD1YBR260C RIP1P08067 215 aa5.67□□□□□ -1.5
RGD1YBR260C RPD3P32561 433 aa5.67□□□□□ -1.5
RGD1YBR260C SEC17P32602 292 aa5.67□□□□□ -1.5
RGD1YBR260C COS9P36034 407 aa5.67□□□□□ -1.5
RGD1YBR260C SHE2P36068 246 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
RGD1YBR260C YBR096WP38256 230 aa5.67□□□□□ -1.5
RGD1YBR260C MGE1P38523 228 aa5.67□□□□□ -1.5
RGD1YBR260C PTP3P40048 928 aa5.67□□□□□ -1.5
RGD1YBR260C FLX1P40464 311 aa5.67□□□□□ -1.5
RGD1YBR260C OPT1P40897 799 aa5.67□□□□□ -1.5
RGD1YBR260C YJR012CP47087 207 aa5.67□□□□□ -1.5
RGD1YBR260C NUP57P48837 541 aa5.67□□□□□ -1.5
RGD1YBR260C YAP1802P53309 568 aa5.67□□□□□ -1.5
RGD1YBR260C DUS1P53759 423 aaKnown RBP5.67□□□□□ -1.5
RGD1YBR260C YNL034WP53963 612 aa5.67□□□□□ -1.5
RGD1YBR260C YSA1Q01976 231 aa5.67□□□□□ -1.5
RGD1YBR260C MET31Q03081 177 aa5.67□□□□□ -1.5
RGD1YBR260C FRQ1Q06389 190 aa5.67□□□□□ -1.5
RGD1YBR260C SDO1Q07953 250 aaKnown RBP5.67□□□□□ -1.5
RGD1YBR260C AI3P03877 415 aa5.67□□□□□ -1.5
RGD1YBR260C PRE1P22141 198 aaKnown RBP5.67□□□□□ -1.5
RGD1YBR260C CPR4P25334 318 aa5.67□□□□□ -1.5
RGD1YBR260C PET18P25362 215 aa5.67□□□□□ -1.5
RGD1YBR260C EHD3P28817 500 aa5.67□□□□□ -1.5
RGD1YBR260C RMA1P36001 430 aaKnown RBP5.67□□□□□ -1.5
RGD1YBR260C DOA1P36037 715 aa5.67□□□□□ -1.5
RGD1YBR260C YBR284WP38150 797 aa5.67□□□□□ -1.5
RGD1YBR260C EMC5P40540 141 aa5.67□□□□□ -1.5
RGD1YBR260C YJR149WP47177 404 aa5.67□□□□□ -1.5
RGD1YBR260C BUL1P48524 976 aa5.67□□□□□ -1.5
RGD1YBR260C TIM21P53220 239 aa5.67□□□□□ -1.5
RGD1YBR260C YGR250CP53316 781 aaKnown RBP5.67□□□□□ -1.5
RGD1YBR260C AAH1P53909 347 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms