RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C RRT13P40042 185 aa3.59□□□□□ -1.83
YPK3YBR028C YGL185CP53100 379 aa3.59□□□□□ -1.83
YPK3YBR028C SED5Q01590 340 aa3.59□□□□□ -1.83
YPK3YBR028C MCH1Q07376 486 aa3.59□□□□□ -1.83
YPK3YBR028C PUT4P15380 627 aa3.59□□□□□ -1.84
YPK3YBR028C EPT1P22140 391 aa3.59□□□□□ -1.84
YPK3YBR028C CYM1P32898 989 aa3.59□□□□□ -1.84
YPK3YBR028C TAE1P38340 232 aa3.59□□□□□ -1.84
YPK3YBR028C VHS1Q03785 461 aa3.59□□□□□ -1.84
YPK3YBR028C SNX41Q04053 625 aa3.59□□□□□ -1.84
YPK3YBR028C YPQ1Q12010 308 aa3.59□□□□□ -1.84
YPK3YBR028C APC9Q12107 265 aa3.59□□□□□ -1.84
YPK3YBR028C MRPL23Q12487 163 aaPredicted RBP3.59□□□□□ -1.84
YPK3YBR028C YAL067W-AQ8TGK6 75 aa3.59□□□□□ -1.84
YPK3YBR028C RPC25P35718 212 aa3.58□□□□□ -1.84
YPK3YBR028C MRPS9P38120 278 aa3.58□□□□□ -1.84
YPK3YBR028C SOP4P39543 234 aaPredicted RBP3.58□□□□□ -1.84
YPK3YBR028C SLM1P40485 686 aa3.58□□□□□ -1.84
YPK3YBR028C ERV41Q04651 352 aa3.58□□□□□ -1.84
YPK3YBR028C YLR413WQ06689 675 aa3.58□□□□□ -1.84
YPK3YBR028C YOL029CQ08187 201 aa3.58□□□□□ -1.84
YPK3YBR028C EFM1P38732 585 aa3.57□□□□□ -1.84
YPK3YBR028C MEP1P40260 492 aa3.57□□□□□ -1.84
YPK3YBR028C SIA1Q12212 622 aa3.57□□□□□ -1.84
YPK3YBR028C RAD7P06779 565 aa3.56□□□□□ -1.84
YPK3YBR028C RPC40P07703 335 aaKnown RBP3.56□□□□□ -1.84
YPK3YBR028C GAL7P08431 366 aa3.56□□□□□ -1.84
YPK3YBR028C GPI12P23797 304 aa3.56□□□□□ -1.84
YPK3YBR028C MID2P36027 376 aa3.56□□□□□ -1.84
YPK3YBR028C DBP7P36120 742 aaKnown RBP3.56□□□□□ -1.84
YPK3YBR028C ECM34P38728 170 aa3.56□□□□□ -1.84
YPK3YBR028C VPS45P38932 577 aa3.56□□□□□ -1.84
YPK3YBR028C COX16P47081 118 aa3.56□□□□□ -1.84
YPK3YBR028C SDS23P53172 527 aa3.56□□□□□ -1.84
YPK3YBR028C YGR266WP53326 701 aa3.56□□□□□ -1.84
YPK3YBR028C APC4Q04601 652 aa3.56□□□□□ -1.84
YPK3YBR028C DTD1Q07648 150 aaKnown RBP3.56□□□□□ -1.84
YPK3YBR028C ERD1P16151 362 aa3.55□□□□□ -1.84
YPK3YBR028C PPQ1P32945 549 aa3.55□□□□□ -1.84
YPK3YBR028C MCH2P36032 473 aa3.55□□□□□ -1.84
YPK3YBR028C YPC1P38298 316 aa3.55□□□□□ -1.84
YPK3YBR028C RRG9P40156 214 aa3.55□□□□□ -1.84
YPK3YBR028C UTP23Q12339 254 aaKnown RBP3.55□□□□□ -1.84
YPK3YBR028C STE2D6VTK4 431 aa3.55□□□□□ -1.84
YPK3YBR028C MRPL20P22354 195 aaPredicted RBP3.55□□□□□ -1.84
YPK3YBR028C MEK1P24719 497 aaPredicted RBP3.55□□□□□ -1.84
YPK3YBR028C YKL187CP34231 750 aa3.55□□□□□ -1.84
YPK3YBR028C EGD1Q02642 157 aaKnown RBP3.55□□□□□ -1.84
YPK3YBR028C INP2Q03824 705 aa3.55□□□□□ -1.84
YPK3YBR028C YMR244WQ04018 355 aa3.55□□□□□ -1.84
YPK3YBR028C YIL002W-AQ3E7Z5 69 aa3.55□□□□□ -1.84
YPK3YBR028C RPL31AP0C2H8 113 aaKnown RBP3.54□□□□□ -1.84
YPK3YBR028C YNR066CP53752 436 aa3.54□□□□□ -1.84
YPK3YBR028C RNY1Q02933 434 aaKnown RBP3.54□□□□□ -1.84
YPK3YBR028C INP1Q03694 420 aa3.54□□□□□ -1.84
YPK3YBR028C YBL111CQ3E7Y5 667 aa3.54□□□□□ -1.84
YPK3YBR028C BI3Q9ZZW7 517 aa3.54□□□□□ -1.84
YPK3YBR028C NOP1P15646 327 aaKnown RBP3.53□□□□□ -1.84
YPK3YBR028C YKL070WP36087 169 aa3.53□□□□□ -1.84
YPK3YBR028C SWD2P36104 329 aaPredicted RBP3.53□□□□□ -1.84
YPK3YBR028C RFT1P38206 574 aaPredicted RBP3.53□□□□□ -1.84
YPK3YBR028C YBR062CP38239 180 aa3.53□□□□□ -1.84
YPK3YBR028C CTM1P38818 585 aa3.53□□□□□ -1.84
YPK3YBR028C GDS1P41913 522 aa3.53□□□□□ -1.84
YPK3YBR028C YFL012WP43580 148 aa3.53□□□□□ -1.84
YPK3YBR028C HIT1P46973 164 aa3.53□□□□□ -1.84
YPK3YBR028C UBC13P52490 153 aa3.53□□□□□ -1.84
YPK3YBR028C FMP48P53233 369 aa3.53□□□□□ -1.84
YPK3YBR028C RPS19AP07280 144 aaKnown RBP3.52□□□□□ -1.85
YPK3YBR028C RPS19BP07281 144 aaPredicted RBP3.52□□□□□ -1.85
YPK3YBR028C INO2P26798 304 aa3.52□□□□□ -1.85
YPK3YBR028C RTT105P40063 208 aa3.52□□□□□ -1.85
YPK3YBR028C GTO1P48239 356 aa3.52□□□□□ -1.85
YPK3YBR028C YNL260CP53846 198 aa3.52□□□□□ -1.85
YPK3YBR028C YNL050CP53952 270 aa3.52□□□□□ -1.85
YPK3YBR028C YPL245WQ12179 454 aaKnown RBP3.52□□□□□ -1.85
YPK3YBR028C YDL012CQ12489 107 aa3.52□□□□□ -1.85
YPK3YBR028C FLO11P08640 1367 aa3.52□□□□□ -1.85
YPK3YBR028C HPR1P17629 752 aaKnown RBP3.51□□□□□ -1.85
YPK3YBR028C CSM1P25651 190 aa3.51□□□□□ -1.85
YPK3YBR028C RPL16BP26785 198 aaKnown RBP3.51□□□□□ -1.85
YPK3YBR028C GPX1P36014 167 aa3.51□□□□□ -1.85
YPK3YBR028C YMR262WP38430 313 aa3.51□□□□□ -1.85
YPK3YBR028C MND1P53102 219 aa3.51□□□□□ -1.85
YPK3YBR028C YGR067CP53243 804 aa3.51□□□□□ -1.85
YPK3YBR028C VTI1Q04338 217 aa3.51□□□□□ -1.85
YPK3YBR028C ECM19Q06011 112 aa3.51□□□□□ -1.85
YPK3YBR028C YLR446WQ06204 433 aa3.51□□□□□ -1.85
YPK3YBR028C IZH4Q99393 312 aa3.51□□□□□ -1.85
YPK3YBR028C TDH3P00359 332 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
YPK3YBR028C ATP6P00854 259 aa3.51□□□□□ -1.85
YPK3YBR028C ZRT3P34240 503 aa3.51□□□□□ -1.85
YPK3YBR028C YER184CP39961 794 aa3.51□□□□□ -1.85
YPK3YBR028C COQ5P49017 307 aa3.51□□□□□ -1.85
YPK3YBR028C FLC3P53121 802 aa3.51□□□□□ -1.85
YPK3YBR028C SWC4P53201 476 aa3.51□□□□□ -1.85
YPK3YBR028C ECM11Q04110 302 aa3.51□□□□□ -1.85
YPK3YBR028C RRP36Q12481 300 aaPredicted RBP3.51□□□□□ -1.85
YPK3YBR028C FMP16Q12497 93 aa3.51□□□□□ -1.85
YPK3YBR028C DFM1Q12743 341 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms