RNA–Protein interactions for RNA: snR60

snR60, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR60, Length 104 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR60	snR60	LCP5	P40079	357 aa	Predicted RBP	0.67	□□□□□ -2.3
snR60	snR60	SYF2	P53277	215 aa	Predicted RBP	0.67	□□□□□ -2.3
snR60	snR60	RET3	P53600	189 aa		0.67	□□□□□ -2.3
snR60	snR60	YNL040W	P53960	456 aa	Predicted RBP	0.67	□□□□□ -2.3
snR60	snR60	RRB1	Q04225	511 aa	Known RBP	0.67	□□□□□ -2.3
snR60	snR60	MYO5	Q04439	1219 aa	Known RBP	0.67	□□□□□ -2.3
snR60	snR60	VPS68	Q12016	184 aa		0.67	□□□□□ -2.3
snR60	snR60	RPN5	Q12250	445 aa	Known RBP	0.67	□□□□□ -2.3
snR60	snR60	TRM10	Q12400	293 aa		0.67	□□□□□ -2.3
snR60	snR60	YOL163W	P0CF20	169 aa		0.66	□□□□□ -2.3
snR60	snR60	PDX1	P16451	410 aa		0.66	□□□□□ -2.3
snR60	snR60	CSE1	P33307	960 aa		0.66	□□□□□ -2.3
snR60	snR60	PCH2	P38126	564 aa		0.66	□□□□□ -2.3
snR60	snR60	KAP104	P38217	918 aa	Known RBP	0.66	□□□□□ -2.3
snR60	snR60	SPP381	P38282	291 aa	Predicted RBP	0.66	□□□□□ -2.3
snR60	snR60	SRP72	P38688	640 aa	Known RBP	0.66	□□□□□ -2.3
snR60	snR60	SMF2	P38778	549 aa		0.66	□□□□□ -2.3
snR60	snR60	YER188W	P40103	239 aa		0.66	□□□□□ -2.3
snR60	snR60	LYS12	P40495	371 aa	Known RBP	0.66	□□□□□ -2.3
snR60	snR60	ZIM17	P42844	174 aa		0.66	□□□□□ -2.3
snR60	snR60	EPL1	P43572	832 aa		0.66	□□□□□ -2.3
snR60	snR60	SDS23	P53172	527 aa		0.66	□□□□□ -2.3
snR60	snR60	LST7	P53237	242 aa		0.66	□□□□□ -2.3
snR60	snR60	TPC1	P53257	314 aa		0.66	□□□□□ -2.3
snR60	snR60	SPH1	Q06160	661 aa		0.66	□□□□□ -2.3
snR60	snR60	YPR078C	Q06813	372 aa		0.66	□□□□□ -2.3
snR60	snR60	RRG1	Q12167	365 aa	Predicted RBP	0.66	□□□□□ -2.3
snR60	snR60	RPN6	Q12377	434 aa		0.66	□□□□□ -2.3
snR60	snR60	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.65	□□□□□ -2.31	not detected
snR60	snR60	CAB3	P36076	571 aa		0.65	□□□□□ -2.31
snR60	snR60	DSE1	P40077	573 aa		0.65	□□□□□ -2.31
snR60	snR60	HIT1	P46973	164 aa		0.65	□□□□□ -2.31
snR60	snR60	DAN1	P47178	298 aa		0.65	□□□□□ -2.31
snR60	snR60	UFD1	P53044	361 aa		0.65	□□□□□ -2.31
snR60	snR60	LSG1	P53145	640 aa	Known RBP	0.65	□□□□□ -2.31
snR60	snR60	DCR2	Q05924	578 aa		0.65	□□□□□ -2.31
snR60	snR60	YOL075C	Q08234	1294 aa		0.65	□□□□□ -2.31
snR60	snR60	DCI1	Q08558	271 aa		0.65	□□□□□ -2.31
snR60	snR60	ERP3	Q12403	225 aa		0.65	□□□□□ -2.31
snR60	snR60	TFS1	P14306	219 aa		0.64	□□□□□ -2.31
snR60	snR60	PRE7	P23724	241 aa	Known RBP	0.64	□□□□□ -2.31
snR60	snR60	RPC53	P25441	422 aa		0.64	□□□□□ -2.31
snR60	snR60	LCB2	P40970	561 aa		0.64	□□□□□ -2.31
snR60	snR60	PMT4	P46971	762 aa		0.64	□□□□□ -2.31
snR60	snR60	TIM22	Q12328	207 aa		0.64	□□□□□ -2.31
snR60	snR60	SRN2	Q99176	213 aa		0.64	□□□□□ -2.31
snR60	snR60	RPL26A	P05743	127 aa	Known RBP	0.63	□□□□□ -2.31
snR60	snR60	RPS16A	P0CX51	143 aa	Known RBP	0.63	□□□□□ -2.31
snR60	snR60	RPS16B	P0CX52	143 aa	Known RBP	0.63	□□□□□ -2.31
snR60	snR60	FUR1	P18562	216 aa	Known RBP	0.63	□□□□□ -2.31
snR60	snR60	CDC42	P19073	191 aa		0.63	□□□□□ -2.31
snR60	snR60	MRPL20	P22354	195 aa	Predicted RBP	0.63	□□□□□ -2.31
snR60	snR60	YHL044W	P38727	235 aa		0.63	□□□□□ -2.31
snR60	snR60	MLH1	P38920	769 aa		0.63	□□□□□ -2.31
snR60	snR60	FCY21	P40039	528 aa		0.63	□□□□□ -2.31
snR60	snR60	YNL320W	P42840	284 aa		0.63	□□□□□ -2.31
snR60	snR60	SRB7	P47822	140 aa		0.63	□□□□□ -2.31
snR60	snR60	RPL26B	P53221	127 aa	Known RBP	0.63	□□□□□ -2.31
snR60	snR60	UBX2	Q04228	584 aa		0.63	□□□□□ -2.31
snR60	snR60	YOR012W	Q12351	137 aa		0.63	□□□□□ -2.31
snR60	snR60	SCO1	P23833	295 aa		0.62	□□□□□ -2.31
snR60	snR60	MSK1	P32048	576 aa		0.62	□□□□□ -2.31
snR60	snR60	ATG7	P38862	630 aa		0.62	□□□□□ -2.31
snR60	snR60	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.62	□□□□□ -2.31	not detected
snR60	snR60	RMT2	Q03305	412 aa		0.62	□□□□□ -2.31
snR60	snR60	CSM3	Q04659	317 aa		0.62	□□□□□ -2.31
snR60	snR60	MIM1	Q08176	113 aa		0.62	□□□□□ -2.31
snR60	snR60	MHP1	P43638	1398 aa		0.61	□□□□□ -2.31
snR60	snR60	YAK1	P14680	807 aa		0.61	□□□□□ -2.31
snR60	snR60	DBR1	P24309	405 aa	Known RBP	0.61	□□□□□ -2.31
snR60	snR60	BUD2	P33314	1104 aa		0.61	□□□□□ -2.31
snR60	snR60	MRPS5	P33759	307 aa		0.61	□□□□□ -2.31
snR60	snR60	EDC2	P40023	145 aa	Predicted RBP	0.61	□□□□□ -2.31
snR60	snR60	YFR054C	P43622	192 aa		0.61	□□□□□ -2.31
snR60	snR60	DSK2	P48510	373 aa		0.61	□□□□□ -2.31
snR60	snR60	SSU72	P53538	206 aa	Predicted RBP	0.61	□□□□□ -2.31
snR60	snR60	AQR1	P53943	586 aa		0.61	□□□□□ -2.31
snR60	snR60	TY3A-G	Q12173	290 aa		0.61	□□□□□ -2.31
snR60	snR60	TY3A-I	Q99219	290 aa		0.61	□□□□□ -2.31
snR60	snR60	HIS3	P06633	220 aa		0.6	□□□□□ -2.31
snR60	snR60	RPL1A	P0CX43	217 aa	Known RBP	0.6	□□□□□ -2.31
snR60	snR60	RPL1B	P0CX44	217 aa	Known RBP	0.6	□□□□□ -2.31
snR60	snR60	ZWF1	P11412	505 aa	Known RBP	0.6	□□□□□ -2.31
snR60	snR60	GRR1	P24814	1151 aa		0.6	□□□□□ -2.31
snR60	snR60	VPH2	P32341	215 aa		0.6	□□□□□ -2.31
snR60	snR60	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
snR60	snR60	PIR5	P46999	287 aa		0.6	□□□□□ -2.31
snR60	snR60	YJR146W	P47174	117 aa		0.6	□□□□□ -2.31
snR60	snR60	CIK1	Q01649	594 aa		0.6	□□□□□ -2.31
snR60	snR60	GPM3	Q12326	303 aa		0.6	□□□□□ -2.31
snR60	snR60	ARF2	P19146	181 aa	Known RBP	0.59	□□□□□ -2.31
snR60	snR60	ERG9	P29704	444 aa		0.59	□□□□□ -2.31
snR60	snR60	PSO2	P30620	661 aa		0.59	□□□□□ -2.31
snR60	snR60	YMR166C	Q03829	368 aa		0.59	□□□□□ -2.31
snR60	snR60	SMP3	Q04174	516 aa		0.59	□□□□□ -2.31
snR60	snR60	AIM33	Q04516	312 aa		0.59	□□□□□ -2.31
snR60	snR60	AIM45	Q12480	344 aa	Known RBP	0.59	□□□□□ -2.31
snR60	snR60	PRM4	Q12498	284 aa		0.59	□□□□□ -2.31
snR60	snR60	YHR086W-A	Q3E746	53 aa		0.59	□□□□□ -2.31
snR60	snR60	FSH3	Q99369	266 aa		0.59	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms