RNA–Protein interactions for RNA: YNR010W

CSE2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene CSE2, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSE2	YNR010W	ASP1	P38986	381 aa	Predicted RBP	0.65	□□□□□ -2.31
CSE2	YNR010W	DSE1	P40077	573 aa		0.65	□□□□□ -2.31
CSE2	YNR010W	LCP5	P40079	357 aa	Predicted RBP	0.65	□□□□□ -2.31
CSE2	YNR010W	YER188W	P40103	239 aa		0.65	□□□□□ -2.31
CSE2	YNR010W	EFM4	P40516	257 aa		0.65	□□□□□ -2.31
CSE2	YNR010W	CAX4	P53223	239 aa		0.65	□□□□□ -2.31
CSE2	YNR010W	RET3	P53600	189 aa		0.65	□□□□□ -2.31
CSE2	YNR010W	ACT1	P60010	375 aa	Known RBP	0.65	□□□□□ -2.31
CSE2	YNR010W	AIM45	Q12480	344 aa	Known RBP	0.65	□□□□□ -2.31
CSE2	YNR010W	VPS63	O13549	108 aa		0.64	□□□□□ -2.31
CSE2	YNR010W	SWE1	P32944	819 aa		0.64	□□□□□ -2.31
CSE2	YNR010W	YKL071W	P36086	256 aa		0.64	□□□□□ -2.31
CSE2	YNR010W	LYS12	P40495	371 aa	Known RBP	0.64	□□□□□ -2.31
CSE2	YNR010W	YIL054W	P40524	105 aa		0.64	□□□□□ -2.31
CSE2	YNR010W	MIC19	P43594	170 aa		0.64	□□□□□ -2.31
CSE2	YNR010W	ECO1	P43605	281 aa		0.64	□□□□□ -2.31
CSE2	YNR010W	SRB7	P47822	140 aa		0.64	□□□□□ -2.31
CSE2	YNR010W	FMP48	P53233	369 aa		0.64	□□□□□ -2.31
CSE2	YNR010W	YNL095C	P53932	642 aa		0.64	□□□□□ -2.31
CSE2	YNR010W	RPN8	Q08723	338 aa	Known RBP	0.64	□□□□□ -2.31
CSE2	YNR010W	RPN5	Q12250	445 aa	Known RBP	0.64	□□□□□ -2.31
CSE2	YNR010W	DAP2	P18962	818 aa		0.63	□□□□□ -2.31
CSE2	YNR010W	PRE7	P23724	241 aa	Known RBP	0.63	□□□□□ -2.31
CSE2	YNR010W	PSO2	P30620	661 aa		0.63	□□□□□ -2.31
CSE2	YNR010W	RFT1	P38206	574 aa	Predicted RBP	0.63	□□□□□ -2.31
CSE2	YNR010W	LST7	P53237	242 aa		0.63	□□□□□ -2.31
CSE2	YNR010W	CSM3	Q04659	317 aa		0.63	□□□□□ -2.31
CSE2	YNR010W	YOL075C	Q08234	1294 aa		0.63	□□□□□ -2.31
CSE2	YNR010W	YOR283W	Q12040	230 aa	Known RBP	0.63	□□□□□ -2.31
CSE2	YNR010W	SPE3	Q12074	293 aa	Known RBP	0.63	□□□□□ -2.31
CSE2	YNR010W	YOR012W	Q12351	137 aa		0.63	□□□□□ -2.31
CSE2	YNR010W	MRX4	Q12467	430 aa		0.63	□□□□□ -2.31
CSE2	YNR010W	GRR1	P24814	1151 aa		0.62	□□□□□ -2.31
CSE2	YNR010W	ITR2	P30606	609 aa		0.62	□□□□□ -2.31
CSE2	YNR010W	MSK1	P32048	576 aa		0.62	□□□□□ -2.31
CSE2	YNR010W	YEL043W	P32618	956 aa		0.62	□□□□□ -2.31
CSE2	YNR010W	KAP104	P38217	918 aa	Known RBP	0.62	□□□□□ -2.31
CSE2	YNR010W	CTM1	P38818	585 aa		0.62	□□□□□ -2.31
CSE2	YNR010W	YHR182W	P38870	785 aa		0.62	□□□□□ -2.31
CSE2	YNR010W	HIT1	P46973	164 aa		0.62	□□□□□ -2.31
CSE2	YNR010W	IES3	Q12345	250 aa		0.62	□□□□□ -2.31
CSE2	YNR010W	ISA2	Q12425	185 aa		0.62	□□□□□ -2.31
CSE2	YNR010W	RAD1	P06777	1100 aa		0.61	□□□□□ -2.31
CSE2	YNR010W	CKI1	P20485	582 aa		0.61	□□□□□ -2.31
CSE2	YNR010W	UTR1	P21373	530 aa		0.61	□□□□□ -2.31
CSE2	YNR010W	MRPS5	P33759	307 aa		0.61	□□□□□ -2.31
CSE2	YNR010W	PEX5	P35056	612 aa		0.61	□□□□□ -2.31
CSE2	YNR010W	SLM1	P40485	686 aa		0.61	□□□□□ -2.31
CSE2	YNR010W	PMT4	P46971	762 aa		0.61	□□□□□ -2.31
CSE2	YNR010W	YGL118C	P53132	145 aa		0.61	□□□□□ -2.31
CSE2	YNR010W	YNL040W	P53960	456 aa	Predicted RBP	0.61	□□□□□ -2.31
CSE2	YNR010W	SMP3	Q04174	516 aa		0.61	□□□□□ -2.31
CSE2	YNR010W	FSH3	Q99369	266 aa		0.61	□□□□□ -2.31
CSE2	YNR010W	SPS100	P13130	326 aa		0.6	□□□□□ -2.31
CSE2	YNR010W	PIR5	P46999	287 aa		0.6	□□□□□ -2.31
CSE2	YNR010W	SDS23	P53172	527 aa		0.6	□□□□□ -2.31
CSE2	YNR010W	SYF2	P53277	215 aa	Predicted RBP	0.6	□□□□□ -2.31
CSE2	YNR010W	SSU72	P53538	206 aa	Predicted RBP	0.6	□□□□□ -2.31
CSE2	YNR010W	CGI121	Q03705	181 aa	Known RBP	0.6	□□□□□ -2.31
CSE2	YNR010W	GYL1	Q04322	720 aa		0.6	□□□□□ -2.31
CSE2	YNR010W	SPH1	Q06160	661 aa		0.6	□□□□□ -2.31
CSE2	YNR010W	TRM10	Q12400	293 aa		0.6	□□□□□ -2.31
CSE2	YNR010W	SFG1	Q12507	346 aa		0.6	□□□□□ -2.31
CSE2	YNR010W	MXR2	P25566	168 aa		0.59	□□□□□ -2.31
CSE2	YNR010W	EFB1	P32471	206 aa	Known RBP	0.59	□□□□□ -2.31
CSE2	YNR010W	CLB6	P32943	380 aa		0.59	□□□□□ -2.31
CSE2	YNR010W	YKL187C	P34231	750 aa		0.59	□□□□□ -2.31
CSE2	YNR010W	PCH2	P38126	564 aa		0.59	□□□□□ -2.31
CSE2	YNR010W	SMF2	P38778	549 aa		0.59	□□□□□ -2.31
CSE2	YNR010W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.31	not detected
CSE2	YNR010W	FCY21	P40039	528 aa		0.59	□□□□□ -2.31
CSE2	YNR010W	DAN1	P47178	298 aa		0.59	□□□□□ -2.31
CSE2	YNR010W	UFD1	P53044	361 aa		0.59	□□□□□ -2.31
CSE2	YNR010W	RRB1	Q04225	511 aa	Known RBP	0.59	□□□□□ -2.31
CSE2	YNR010W	PEX27	Q08580	376 aa		0.59	□□□□□ -2.31
CSE2	YNR010W	TFC7	Q12415	435 aa		0.59	□□□□□ -2.31
CSE2	YNR010W	SRN2	Q99176	213 aa		0.59	□□□□□ -2.31
CSE2	YNR010W	MHP1	P43638	1398 aa		0.58	□□□□□ -2.32
CSE2	YNR010W	PHO80	P20052	293 aa		0.58	□□□□□ -2.32
CSE2	YNR010W	PXA2	P34230	853 aa		0.58	□□□□□ -2.32
CSE2	YNR010W	NRG2	P38082	220 aa		0.58	□□□□□ -2.32
CSE2	YNR010W	PET8	P38921	284 aa		0.58	□□□□□ -2.32
CSE2	YNR010W	POP2	P39008	433 aa		0.58	□□□□□ -2.32
CSE2	YNR010W	YNL320W	P42840	284 aa		0.58	□□□□□ -2.32
CSE2	YNR010W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.58	□□□□□ -2.32	not detected
CSE2	YNR010W	YJR146W	P47174	117 aa		0.58	□□□□□ -2.32
CSE2	YNR010W	MYO5	Q04439	1219 aa	Known RBP	0.58	□□□□□ -2.32
CSE2	YNR010W	NAT4	Q04751	285 aa		0.58	□□□□□ -2.32
CSE2	YNR010W	VPS68	Q12016	184 aa		0.58	□□□□□ -2.32
CSE2	YNR010W	YAL063C-A	Q3E791	96 aa		0.58	□□□□□ -2.32
CSE2	YNR010W	REP1	P03871	373 aa		0.57	□□□□□ -2.32
CSE2	YNR010W	YCR025C	P25352	136 aa		0.57	□□□□□ -2.32
CSE2	YNR010W	CSE1	P33307	960 aa		0.57	□□□□□ -2.32
CSE2	YNR010W	JNM1	P36224	373 aa		0.57	□□□□□ -2.32
CSE2	YNR010W	YBR062C	P38239	180 aa		0.57	□□□□□ -2.32
CSE2	YNR010W	YIL089W	P40500	205 aa		0.57	□□□□□ -2.32
CSE2	YNR010W	OSH6	Q02201	448 aa		0.57	□□□□□ -2.32
CSE2	YNR010W	UTP6	Q02354	440 aa	Known RBP	0.57	□□□□□ -2.32
CSE2	YNR010W	RDS3	Q06835	107 aa	Predicted RBP	0.57	□□□□□ -2.32
CSE2	YNR010W	ERP3	Q12403	225 aa		0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms