RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C UNG1P12887 359 aa2.87□□□□□ -1.95
WHI3YNL197C MRPL10P36520 322 aa2.87□□□□□ -1.95
WHI3YNL197C CHL4P38907 458 aa2.87□□□□□ -1.95
WHI3YNL197C GAB1P41733 394 aa2.87□□□□□ -1.95
WHI3YNL197C YNL050CP53952 270 aa2.87□□□□□ -1.95
WHI3YNL197C IRC4Q03036 179 aa2.87□□□□□ -1.95
WHI3YNL197C AAT2P23542 418 aaKnown RBP2.87□□□□□ -1.95
WHI3YNL197C PRR1P28708 518 aa2.87□□□□□ -1.95
WHI3YNL197C CTM1P38818 585 aa2.87□□□□□ -1.95
WHI3YNL197C PGU1P47180 361 aa2.87□□□□□ -1.95
WHI3YNL197C YGL242CP53066 181 aa2.87□□□□□ -1.95
WHI3YNL197C FAR10Q06001 478 aa2.87□□□□□ -1.95
WHI3YNL197C PBP4Q07362 185 aaKnown RBP2.87□□□□□ -1.95
WHI3YNL197C YLL007CQ07799 665 aa2.87□□□□□ -1.95
WHI3YNL197C RDL2Q08742 149 aaKnown RBP2.87□□□□□ -1.95
WHI3YNL197C PRP46Q12417 451 aaPredicted RBP2.87□□□□□ -1.95
WHI3YNL197C TPO5P36029 618 aa2.86□□□□□ -1.95
WHI3YNL197C TIM17P39515 158 aa2.86□□□□□ -1.95
WHI3YNL197C MOB2P43563 287 aa2.86□□□□□ -1.95
WHI3YNL197C PMT4P46971 762 aa2.86□□□□□ -1.95
WHI3YNL197C COX16P47081 118 aa2.86□□□□□ -1.95
WHI3YNL197C YJR054WP47114 497 aa2.86□□□□□ -1.95
WHI3YNL197C BCP1Q06338 283 aa2.86□□□□□ -1.95
WHI3YNL197C SAM4Q08985 325 aaKnown RBP2.86□□□□□ -1.95
WHI3YNL197C SLF1Q12034 447 aaKnown RBP2.86□□□□□ -1.95
WHI3YNL197C ATP6P00854 259 aa2.85□□□□□ -1.95
WHI3YNL197C CDC50P25656 391 aa2.85□□□□□ -1.95
WHI3YNL197C ITR2P30606 609 aa2.85□□□□□ -1.95
WHI3YNL197C NUP2P32499 720 aa2.85□□□□□ -1.95
WHI3YNL197C MRPL37P36532 105 aa2.85□□□□□ -1.95
WHI3YNL197C RCK1P38622 512 aa2.85□□□□□ -1.95
WHI3YNL197C YHR035WP38769 630 aa2.85□□□□□ -1.95
WHI3YNL197C CDH1P53197 566 aa2.85□□□□□ -1.95
WHI3YNL197C TPC1P53257 314 aa2.85□□□□□ -1.95
WHI3YNL197C FSH2Q05015 223 aa2.85□□□□□ -1.95
WHI3YNL197C PRM4Q12498 284 aa2.85□□□□□ -1.95
WHI3YNL197C RAD7P06779 565 aa2.85□□□□□ -1.95
WHI3YNL197C SPS100P13130 326 aa2.85□□□□□ -1.95
WHI3YNL197C HPR1P17629 752 aaKnown RBP2.85□□□□□ -1.95
WHI3YNL197C RVS161P25343 265 aaKnown RBP2.85□□□□□ -1.95
WHI3YNL197C LDS1P31379 325 aa2.85□□□□□ -1.95
WHI3YNL197C MEI5P32489 222 aa2.85□□□□□ -1.95
WHI3YNL197C PDC2P32896 925 aa2.85□□□□□ -1.95
WHI3YNL197C YUH1P35127 236 aa2.85□□□□□ -1.95
WHI3YNL197C SHE1P38200 338 aa2.85□□□□□ -1.95
WHI3YNL197C OM14P38325 134 aa2.85□□□□□ -1.95
WHI3YNL197C HIS2P38635 335 aa2.85□□□□□ -1.95
WHI3YNL197C PFS1P38872 237 aa2.85□□□□□ -1.95
WHI3YNL197C ALD5P40047 520 aaKnown RBP2.85□□□□□ -1.95
WHI3YNL197C YGR015CP53208 328 aa2.85□□□□□ -1.95
WHI3YNL197C ENT5Q03769 411 aaKnown RBP2.85□□□□□ -1.95
WHI3YNL197C CSI1Q04368 295 aa2.85□□□□□ -1.95
WHI3YNL197C YLR177WQ06251 628 aa2.85□□□□□ -1.95
WHI3YNL197C RPL31AP0C2H8 113 aaKnown RBP2.84□□□□□ -1.95
WHI3YNL197C CSM1P25651 190 aa2.84□□□□□ -1.95
WHI3YNL197C ZRT1P32804 376 aa2.84□□□□□ -1.95
WHI3YNL197C MCH2P36032 473 aa2.84□□□□□ -1.95
WHI3YNL197C PET100P38958 111 aa2.84□□□□□ -1.95
WHI3YNL197C PEX22P39718 180 aa2.84□□□□□ -1.95
WHI3YNL197C GDS1P41913 522 aa2.84□□□□□ -1.95
WHI3YNL197C AGP3P43548 558 aa2.84□□□□□ -1.95
WHI3YNL197C CWC22P53333 577 aaKnown RBP2.84□□□□□ -1.95
WHI3YNL197C YMR010WQ03687 405 aa2.84□□□□□ -1.95
WHI3YNL197C SNX41Q04053 625 aa2.84□□□□□ -1.95
WHI3YNL197C GAS2Q06135 555 aa2.84□□□□□ -1.95
WHI3YNL197C RSA1Q08932 381 aa2.84□□□□□ -1.95
WHI3YNL197C YPQ1Q12010 308 aa2.84□□□□□ -1.95
WHI3YNL197C WTM1Q12363 437 aaKnown RBP2.84□□□□□ -1.95
WHI3YNL197C HMS1Q12398 434 aa2.84□□□□□ -1.95
WHI3YNL197C CMK2P22517 447 aa2.83□□□□□ -1.96
WHI3YNL197C SPR1P32603 445 aa2.83□□□□□ -1.96
WHI3YNL197C YMR262WP38430 313 aa2.83□□□□□ -1.96
WHI3YNL197C PET8P38921 284 aa2.83□□□□□ -1.96
WHI3YNL197C FHL1P39521 936 aa2.83□□□□□ -1.96
WHI3YNL197C RCY1P39531 840 aa2.83□□□□□ -1.96
WHI3YNL197C SOP4P39543 234 aaPredicted RBP2.83□□□□□ -1.96
WHI3YNL197C SHQ1P40486 507 aaPredicted RBP2.83□□□□□ -1.96
WHI3YNL197C YGR266WP53326 701 aa2.83□□□□□ -1.96
WHI3YNL197C MPP6P53725 186 aaPredicted RBP2.83□□□□□ -1.96
WHI3YNL197C HCH1P53834 153 aa2.83□□□□□ -1.96
WHI3YNL197C SLT2Q00772 484 aa2.83□□□□□ -1.96
WHI3YNL197C SED5Q01590 340 aa2.83□□□□□ -1.96
WHI3YNL197C MRX9Q07349 420 aaKnown RBP2.83□□□□□ -1.96
WHI3YNL197C ZRC1P20107 442 aa2.83□□□□□ -1.96
WHI3YNL197C YPC1P38298 316 aa2.83□□□□□ -1.96
WHI3YNL197C EMC2P47133 292 aaKnown RBP2.83□□□□□ -1.96
WHI3YNL197C LSB1P53281 241 aa2.83□□□□□ -1.96
WHI3YNL197C RRN5Q02983 363 aa2.83□□□□□ -1.96
WHI3YNL197C MIM1Q08176 113 aa2.83□□□□□ -1.96
WHI3YNL197C RPN8Q08723 338 aaKnown RBP2.83□□□□□ -1.96
WHI3YNL197C TDH3P00359 332 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
WHI3YNL197C DEP1P31385 405 aa2.82□□□□□ -1.96
WHI3YNL197C COS9P36034 407 aa2.82□□□□□ -1.96
WHI3YNL197C TIS11P47977 285 aa2.82□□□□□ -1.96
WHI3YNL197C UBC13P52490 153 aa2.82□□□□□ -1.96
WHI3YNL197C SPP2Q02521 185 aa2.82□□□□□ -1.96
WHI3YNL197C COX2P00410 251 aa2.81□□□□□ -1.96
WHI3YNL197C STE7P06784 515 aa2.81□□□□□ -1.96
WHI3YNL197C GCG1P32656 232 aaKnown RBP2.81□□□□□ -1.96
WHI3YNL197C CBF5P33322 483 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms