RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR3, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR3	YLR411W	PRE6	P40303	254 aa	Known RBP	4.91	□□□□□ -1.62
CTR3	YLR411W	MPM1	P40364	252 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	YIL089W	P40500	205 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	HXT9	P40885	567 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	SER2	P42941	309 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	FET5	P43561	622 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	PMT4	P46971	762 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	DPB11	P47027	764 aa	Predicted RBP	4.91	□□□□□ -1.62
CTR3	YLR411W	SNX4	P47057	423 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	AAD10	P47182	288 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	SGF73	P53165	657 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	PRM8	P53174	237 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	RBG2	P53295	368 aa	Known RBP	4.91	□□□□□ -1.62
CTR3	YLR411W	NUP49	Q02199	472 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	NUP53	Q03790	475 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	YLR345W	Q06137	509 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	YLR446W	Q06204	433 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	YOL131W	Q08270	108 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	RBD2	Q12270	262 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	SFM1	Q12314	213 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	GLE1	Q12315	538 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	RTR2	Q12378	196 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	YCL012C	Q8J0M4	134 aa		4.91	□□□□□ -1.62
CTR3	YLR411W	ARG81	P05085	880 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	SCH9	P11792	824 aa	Known RBP	4.9	□□□□□ -1.63
CTR3	YLR411W	DCC1	P25559	380 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	HIR2	P32480	875 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	MEI5	P32489	222 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	CSE2	P33308	149 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	YBR225W	P38321	900 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	YER137C	P40083	148 aa	Known RBP	4.9	□□□□□ -1.63
CTR3	YLR411W	VRG4	P40107	337 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	AIM22	P47051	409 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	YPT32	P51996	222 aa	Known RBP	4.9	□□□□□ -1.63
CTR3	YLR411W	TPN1	P53099	579 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	YGR067C	P53243	804 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	VAC7	P53950	1165 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	YMR178W	Q03219	274 aa	Known RBP	4.9	□□□□□ -1.63
CTR3	YLR411W	YMD8	Q03697	442 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	EMI1	Q04406	187 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	SAM4	Q08985	325 aa	Known RBP	4.9	□□□□□ -1.63
CTR3	YLR411W	SLF1	Q12034	447 aa	Known RBP	4.9	□□□□□ -1.63
CTR3	YLR411W	PKH2	Q12236	1081 aa	Known RBP	4.9	□□□□□ -1.63
CTR3	YLR411W	INP53	Q12271	1107 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	RRP42	Q12277	265 aa	Predicted RBP	4.9	□□□□□ -1.63
CTR3	YLR411W	YDR061W	Q12298	539 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	YPR1	Q12458	312 aa		4.9	□□□□□ -1.63
CTR3	YLR411W	YPR096C	O13587	100 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	PDE2	P06776	526 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	STE3	P06783	470 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	UNG1	P12887	359 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	SEN2	P16658	377 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	MRPL8	P22353	238 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	RPL24B	P24000	155 aa	Known RBP	4.89	□□□□□ -1.63
CTR3	YLR411W	SLM5	P25345	492 aa	Known RBP	4.89	□□□□□ -1.63
CTR3	YLR411W	TAH1	P25638	111 aa	Predicted RBP	4.89	□□□□□ -1.63
CTR3	YLR411W	PPQ1	P32945	549 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	SNU114	P36048	1008 aa	Known RBP	4.89	□□□□□ -1.63
CTR3	YLR411W	DRE2	P36152	348 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	MRPL40	P36534	297 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	NAT2	P37293	288 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	APE3	P37302	537 aa	Known RBP	4.89	□□□□□ -1.63
CTR3	YLR411W	YBR242W	P38331	238 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	URA8	P38627	578 aa	Predicted RBP	4.89	□□□□□ -1.63
CTR3	YLR411W	YHK8	P38776	514 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	UIP3	P39547	235 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	RPH1	P39956	796 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	COG3	P40094	801 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	SOK1	P40317	901 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	TES1	P41903	349 aa	Known RBP	4.89	□□□□□ -1.63
CTR3	YLR411W	STE24	P47154	453 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	HMS2	P47175	358 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	PRP24	P49960	444 aa	Known RBP	4.89	□□□□□ -1.63
CTR3	YLR411W	NBP35	P52920	328 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	TIM13	P53299	105 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	MEP3	P53390	489 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	MRPS16	Q02608	121 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	NUP116	Q02630	1113 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	YMR010W	Q03687	405 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	CCE1	Q03702	353 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	AIM36	Q03798	255 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	COA4	Q05809	96 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	VPS74	Q06385	345 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	RTN2	Q12443	393 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	SFG1	Q12507	346 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	LAG2	Q92325	660 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	YOR338W	Q99326	363 aa		4.89	□□□□□ -1.63
CTR3	YLR411W	MIA40	P36046	403 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	ARA1	P38115	344 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	MET30	P39014	640 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	RCY1	P39531	840 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	PAN6	P40459	309 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	IRC6	P43615	237 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	APS3	P47064	194 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	MKC7	P53379	596 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	TIM11	P81449	96 aa	Predicted RBP	4.88	□□□□□ -1.63
CTR3	YLR411W	PIR3	Q03180	325 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	CTL1	Q03220	320 aa	Known RBP	4.88	□□□□□ -1.63
CTR3	YLR411W	TRM82	Q03774	444 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	ASR1	Q06834	288 aa		4.88	□□□□□ -1.63

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