RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C PRM10P42946 383 aa6.87□□□□□ -1.31
AFG2YLR397C PAM16P42949 149 aa6.87□□□□□ -1.31
AFG2YLR397C ATG18P43601 500 aa6.87□□□□□ -1.31
AFG2YLR397C PHO86P46956 311 aa6.87□□□□□ -1.31
AFG2YLR397C MPC1P53157 130 aaKnown RBP6.87□□□□□ -1.31
AFG2YLR397C GND2P53319 492 aa6.87□□□□□ -1.31
AFG2YLR397C BUD32P53323 261 aa6.87□□□□□ -1.31
AFG2YLR397C BUD17P53727 317 aa6.87□□□□□ -1.31
AFG2YLR397C EOS1P53938 366 aa6.87□□□□□ -1.31
AFG2YLR397C PRP38Q00723 242 aaPredicted RBP6.87□□□□□ -1.31
AFG2YLR397C MSC1Q03104 513 aa6.87□□□□□ -1.31
AFG2YLR397C GAS3Q03655 524 aa6.87□□□□□ -1.31
AFG2YLR397C YMR034CQ05131 434 aaPredicted RBP6.87□□□□□ -1.31
AFG2YLR397C YPR127WQ06494 345 aa6.87□□□□□ -1.31
AFG2YLR397C YOR378WQ08902 515 aa6.87□□□□□ -1.31
AFG2YLR397C TFC7Q12415 435 aa6.87□□□□□ -1.31
AFG2YLR397C FKS1P38631 1876 aaKnown RBP6.87□□□□□ -1.31
AFG2YLR397C RPL35AP0CX84 120 aaKnown RBP6.87□□□□□ -1.31
AFG2YLR397C RPL35BP0CX85 120 aaKnown RBP6.87□□□□□ -1.31
AFG2YLR397C YCK2P23292 546 aaKnown RBP6.87□□□□□ -1.31
AFG2YLR397C PUP3P25451 205 aaKnown RBP6.87□□□□□ -1.31
AFG2YLR397C RMA1P36001 430 aaKnown RBP6.87□□□□□ -1.31
AFG2YLR397C YHR033WP38690 423 aa6.87□□□□□ -1.31
AFG2YLR397C VPS45P38932 577 aa6.87□□□□□ -1.31
AFG2YLR397C FAA3P39002 694 aa6.87□□□□□ -1.31
AFG2YLR397C SMB1P40018 196 aaKnown RBP6.87□□□□□ -1.31
AFG2YLR397C LRO1P40345 661 aa6.87□□□□□ -1.31
AFG2YLR397C GAB1P41733 394 aa6.87□□□□□ -1.31
AFG2YLR397C AZR1P50080 613 aa6.87□□□□□ -1.31
AFG2YLR397C AVT4P50944 713 aa6.87□□□□□ -1.31
AFG2YLR397C ROG1P53118 685 aa6.87□□□□□ -1.31
AFG2YLR397C YKR011CQ02209 353 aa6.87□□□□□ -1.31
AFG2YLR397C ASR1Q06834 288 aa6.87□□□□□ -1.31
AFG2YLR397C MRX4Q12467 430 aa6.87□□□□□ -1.31
AFG2YLR397C YJR112W-AQ3E743 109 aa6.87□□□□□ -1.31
AFG2YLR397C THP2O13539 261 aaKnown RBP6.86□□□□□ -1.31
AFG2YLR397C STE4P18851 423 aa6.86□□□□□ -1.31
AFG2YLR397C SNF6P18888 332 aa6.86□□□□□ -1.31
AFG2YLR397C ERG6P25087 383 aaKnown RBP6.86□□□□□ -1.31
AFG2YLR397C PET18P25362 215 aa6.86□□□□□ -1.31
AFG2YLR397C VBA3P25594 458 aa6.86□□□□□ -1.31
AFG2YLR397C YCR061WP25639 631 aa6.86□□□□□ -1.31
AFG2YLR397C SYN8P31377 255 aa6.86□□□□□ -1.31
AFG2YLR397C APL3P38065 1025 aa6.86□□□□□ -1.31
AFG2YLR397C PUG1P40100 303 aa6.86□□□□□ -1.31
AFG2YLR397C LCB2P40970 561 aa6.86□□□□□ -1.31
AFG2YLR397C NUP57P48837 541 aa6.86□□□□□ -1.31
AFG2YLR397C MKC7P53379 596 aa6.86□□□□□ -1.31
AFG2YLR397C GPD1Q00055 391 aaKnown RBP6.86□□□□□ -1.31
AFG2YLR397C YPL014WQ02606 381 aa6.86□□□□□ -1.31
AFG2YLR397C DUS4Q06063 367 aa6.86□□□□□ -1.31
AFG2YLR397C BER1Q06688 274 aaKnown RBP6.86□□□□□ -1.31
AFG2YLR397C PUN1Q06991 263 aa6.86□□□□□ -1.31
AFG2YLR397C HOS1Q12214 470 aa6.86□□□□□ -1.31
AFG2YLR397C KCS1Q12494 1050 aa6.86□□□□□ -1.31
AFG2YLR397C RPP2AP05319 106 aaKnown RBP6.85□□□□□ -1.31
AFG2YLR397C RIP1P08067 215 aa6.85□□□□□ -1.31
AFG2YLR397C DDI2P0CH63 225 aa6.85□□□□□ -1.31
AFG2YLR397C DDI3P0CH64 225 aa6.85□□□□□ -1.31
AFG2YLR397C TVP38P36164 337 aa6.85□□□□□ -1.31
AFG2YLR397C YHR122WP38829 231 aa6.85□□□□□ -1.31
AFG2YLR397C YIL152WP40455 235 aa6.85□□□□□ -1.31
AFG2YLR397C QRI7P43122 407 aa6.85□□□□□ -1.31
AFG2YLR397C YJR011CP47086 261 aaPredicted RBP6.85□□□□□ -1.31
AFG2YLR397C YGR053CP53234 283 aa6.85□□□□□ -1.31
AFG2YLR397C YAP1802P53309 568 aa6.85□□□□□ -1.31
AFG2YLR397C YPL077CQ02831 240 aa6.85□□□□□ -1.31
AFG2YLR397C VBA1Q04301 562 aa6.85□□□□□ -1.31
AFG2YLR397C ARG7Q04728 441 aa6.85□□□□□ -1.31
AFG2YLR397C YLR455WQ06188 304 aa6.85□□□□□ -1.31
AFG2YLR397C CTF3Q12748 733 aa6.85□□□□□ -1.31
AFG2YLR397C STE50P25344 346 aa6.85□□□□□ -1.31
AFG2YLR397C BUB2P26448 306 aaPredicted RBP6.85□□□□□ -1.31
AFG2YLR397C BNA4P38169 460 aa6.85□□□□□ -1.31
AFG2YLR397C LRP1P38801 184 aaKnown RBP6.85□□□□□ -1.31
AFG2YLR397C NAS2P40555 220 aa6.85□□□□□ -1.31
AFG2YLR397C PLB2Q03674 706 aa6.85□□□□□ -1.31
AFG2YLR397C DOT1Q04089 582 aaKnown RBP6.85□□□□□ -1.31
AFG2YLR397C PIN2Q12057 282 aa6.85□□□□□ -1.31
AFG2YLR397C YNR034W-AQ3E841 98 aa6.85□□□□□ -1.31
AFG2YLR397C PEP4P07267 405 aaKnown RBP6.84□□□□□ -1.31
AFG2YLR397C ARG8P18544 423 aa6.84□□□□□ -1.31
AFG2YLR397C SEC59P20048 519 aa6.84□□□□□ -1.31
AFG2YLR397C MRPL6P32904 214 aa6.84□□□□□ -1.31
AFG2YLR397C YPT7P32939 208 aa6.84□□□□□ -1.31
AFG2YLR397C MTC4P38335 694 aaKnown RBP6.84□□□□□ -1.31
AFG2YLR397C RCK1P38622 512 aa6.84□□□□□ -1.31
AFG2YLR397C CRP1P38845 465 aaKnown RBP6.84□□□□□ -1.31
AFG2YLR397C SUR2P38992 349 aa6.84□□□□□ -1.31
AFG2YLR397C YIL161WP40449 235 aaKnown RBP6.84□□□□□ -1.31
AFG2YLR397C FAA4P47912 694 aaKnown RBP6.84□□□□□ -1.31
AFG2YLR397C ASN1P49089 572 aaKnown RBP6.84□□□□□ -1.31
AFG2YLR397C SLD5Q03406 294 aa6.84□□□□□ -1.31
AFG2YLR397C CUE4Q04201 117 aaPredicted RBP6.84□□□□□ -1.31
AFG2YLR397C ATG39Q06159 398 aa6.84□□□□□ -1.31
AFG2YLR397C MED7Q08278 222 aa6.84□□□□□ -1.31
AFG2YLR397C PSF1Q12488 208 aa6.84□□□□□ -1.31
AFG2YLR397C RPS9AO13516 197 aaKnown RBP6.84□□□□□ -1.31
AFG2YLR397C COX6P00427 148 aa6.84□□□□□ -1.31
AFG2YLR397C RPS9BP05755 195 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms