RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C SPB1P25582 841 aaPredicted RBP4.34□□□□□ -1.71
NMD4YLR363C SMI1P32566 505 aa4.34□□□□□ -1.71
NMD4YLR363C CDC13P32797 924 aaKnown RBP4.34□□□□□ -1.71
NMD4YLR363C HCS1P34243 683 aa4.34□□□□□ -1.71
NMD4YLR363C ARA1P38115 344 aa4.34□□□□□ -1.71
NMD4YLR363C YSW1P38280 609 aa4.34□□□□□ -1.71
NMD4YLR363C DED81P38707 554 aaKnown RBP4.34□□□□□ -1.71
NMD4YLR363C CAJ1P39101 391 aa4.34□□□□□ -1.71
NMD4YLR363C TIM17P39515 158 aa4.34□□□□□ -1.71
NMD4YLR363C YIL067CP40514 678 aa4.34□□□□□ -1.71
NMD4YLR363C RMD9P53140 646 aaKnown RBP4.34□□□□□ -1.71
NMD4YLR363C YGR266WP53326 701 aa4.34□□□□□ -1.71
NMD4YLR363C FRE4P53746 719 aa4.34□□□□□ -1.71
NMD4YLR363C RHO3Q00245 231 aaKnown RBP4.34□□□□□ -1.71
NMD4YLR363C PET117Q02771 107 aa4.34□□□□□ -1.71
NMD4YLR363C HOT1Q03213 719 aa4.34□□□□□ -1.71
NMD4YLR363C FAR8Q05040 523 aa4.34□□□□□ -1.71
NMD4YLR363C RQC1Q05468 723 aaKnown RBP4.34□□□□□ -1.71
NMD4YLR363C PBA1Q05778 276 aa4.34□□□□□ -1.71
NMD4YLR363C BSC6Q08280 497 aa4.34□□□□□ -1.71
NMD4YLR363C YPL199CQ08954 240 aa4.34□□□□□ -1.71
NMD4YLR363C THP3Q12049 470 aaKnown RBP4.34□□□□□ -1.71
NMD4YLR363C ERV2Q12284 196 aa4.34□□□□□ -1.71
NMD4YLR363C YDR262WQ12331 272 aa4.34□□□□□ -1.71
NMD4YLR363C LDB17Q12342 491 aa4.34□□□□□ -1.71
NMD4YLR363C CSF1Q12150 2958 aa4.34□□□□□ -1.72
NMD4YLR363C REP1P03871 373 aa4.33□□□□□ -1.72
NMD4YLR363C IMA3P0CW40 589 aa4.33□□□□□ -1.72
NMD4YLR363C IMA4P0CW41 589 aa4.33□□□□□ -1.72
NMD4YLR363C YSR3P23501 404 aa4.33□□□□□ -1.72
NMD4YLR363C ITR2P30606 609 aa4.33□□□□□ -1.72
NMD4YLR363C ECM4P36156 370 aa4.33□□□□□ -1.72
NMD4YLR363C THI2P38141 450 aa4.33□□□□□ -1.72
NMD4YLR363C MRP21P38175 177 aa4.33□□□□□ -1.72
NMD4YLR363C MMS21P38632 267 aa4.33□□□□□ -1.72
NMD4YLR363C SMF2P38778 549 aa4.33□□□□□ -1.72
NMD4YLR363C SCC4P40090 624 aa4.33□□□□□ -1.72
NMD4YLR363C RPC17P47076 161 aa4.33□□□□□ -1.72
NMD4YLR363C GPI8P49018 411 aa4.33□□□□□ -1.72
NMD4YLR363C PLP1Q04004 230 aa4.33□□□□□ -1.72
NMD4YLR363C RPN9Q04062 393 aaKnown RBP4.33□□□□□ -1.72
NMD4YLR363C IMA2Q08295 589 aa4.33□□□□□ -1.72
NMD4YLR363C ERP4Q12450 207 aa4.33□□□□□ -1.72
NMD4YLR363C NOT5Q12514 560 aaPredicted RBP4.33□□□□□ -1.72
NMD4YLR363C TEF1P02994 458 aaKnown RBP4.32□□□□□ -1.72
NMD4YLR363C LDB16P25587 256 aa4.32□□□□□ -1.72
NMD4YLR363C NAM9P27929 486 aa4.32□□□□□ -1.72
NMD4YLR363C YPT52P36018 234 aaKnown RBP4.32□□□□□ -1.72
NMD4YLR363C PCH2P38126 564 aa4.32□□□□□ -1.72
NMD4YLR363C POP4P38336 279 aa4.32□□□□□ -1.72
NMD4YLR363C MSG5P38590 489 aa4.32□□□□□ -1.72
NMD4YLR363C YHR045WP38775 560 aa4.32□□□□□ -1.72
NMD4YLR363C PTI1P39927 425 aaPredicted RBP4.32□□□□□ -1.72
NMD4YLR363C YEL073CP39974 107 aa4.32□□□□□ -1.72
NMD4YLR363C GIM4P40005 111 aaKnown RBP4.32□□□□□ -1.72
NMD4YLR363C LSM5P40089 93 aaKnown RBP4.32□□□□□ -1.72
NMD4YLR363C MEP1P40260 492 aa4.32□□□□□ -1.72
NMD4YLR363C STB1P42845 420 aa4.32□□□□□ -1.72
NMD4YLR363C TRS85P46944 698 aa4.32□□□□□ -1.72
NMD4YLR363C RPL22BP56628 122 aaKnown RBP4.32□□□□□ -1.72
NMD4YLR363C OSH6Q02201 448 aa4.32□□□□□ -1.72
NMD4YLR363C DML1Q03652 475 aa4.32□□□□□ -1.72
NMD4YLR363C YMR114CQ04471 368 aaKnown RBP4.32□□□□□ -1.72
NMD4YLR363C STE23Q06010 1027 aa4.32□□□□□ -1.72
NMD4YLR363C VAC14Q06708 880 aa4.32□□□□□ -1.72
NMD4YLR363C YLR030WQ07967 263 aa4.32□□□□□ -1.72
NMD4YLR363C MUM3Q08750 479 aa4.32□□□□□ -1.72
NMD4YLR363C YLR108CQ12259 485 aa4.32□□□□□ -1.72
NMD4YLR363C HIS3P06633 220 aa4.31□□□□□ -1.72
NMD4YLR363C SPS4P09937 338 aa4.31□□□□□ -1.72
NMD4YLR363C GCD2P12754 651 aaPredicted RBP4.31□□□□□ -1.72
NMD4YLR363C YCL068CP25593 260 aa4.31□□□□□ -1.72
NMD4YLR363C IDH2P28241 369 aaKnown RBP4.31□□□□□ -1.72
NMD4YLR363C ACP1P32463 125 aa4.31□□□□□ -1.72
NMD4YLR363C SDH3P33421 198 aa4.31□□□□□ -1.72
NMD4YLR363C TIP20P33891 701 aa4.31□□□□□ -1.72
NMD4YLR363C YKL063CP35725 167 aa4.31□□□□□ -1.72
NMD4YLR363C TRM7P38238 310 aaKnown RBP4.31□□□□□ -1.72
NMD4YLR363C LYS1P38998 373 aaRIP-Chip data4.31□□□□□ -1.72not detected
NMD4YLR363C YER034WP40022 185 aaKnown RBP4.31□□□□□ -1.72
NMD4YLR363C YIL001WP40560 513 aa4.31□□□□□ -1.72
NMD4YLR363C YGR210CP42942 411 aa4.31□□□□□ -1.72
NMD4YLR363C IRC6P43615 237 aa4.31□□□□□ -1.72
NMD4YLR363C EFM5P53200 248 aaKnown RBP4.31□□□□□ -1.72
NMD4YLR363C MRP51Q02950 344 aa4.31□□□□□ -1.72
NMD4YLR363C YOL024WQ08172 172 aa4.31□□□□□ -1.72
NMD4YLR363C SCM3Q12334 223 aa4.31□□□□□ -1.72
NMD4YLR363C HTZ1Q12692 134 aaKnown RBP4.31□□□□□ -1.72
NMD4YLR363C LAG2Q92325 660 aa4.31□□□□□ -1.72
NMD4YLR363C HFA1P32874 2273 aa4.31□□□□□ -1.72
NMD4YLR363C NMT1P14743 455 aa4.3□□□□□ -1.72
NMD4YLR363C FUR1P18562 216 aaKnown RBP4.3□□□□□ -1.72
NMD4YLR363C CPR4P25334 318 aa4.3□□□□□ -1.72
NMD4YLR363C HSP30P25619 332 aa4.3□□□□□ -1.72
NMD4YLR363C ARO2P28777 376 aaKnown RBP4.3□□□□□ -1.72
NMD4YLR363C URA10P30402 227 aa4.3□□□□□ -1.72
NMD4YLR363C SKN1P33336 771 aa4.3□□□□□ -1.72
NMD4YLR363C SKT5P34226 696 aa4.3□□□□□ -1.72
NMD4YLR363C MRPL4P36517 319 aa4.3□□□□□ -1.72
NMD4YLR363C YCR041WP37265 110 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms