RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W LOS1P33418 1100 aaPredicted RBP3.94□□□□□ -1.78
SOF1YLL011W HOT13P36078 116 aa3.94□□□□□ -1.78
SOF1YLL011W SWD2P36104 329 aaPredicted RBP3.94□□□□□ -1.78
SOF1YLL011W SPC34P36131 295 aa3.94□□□□□ -1.78
SOF1YLL011W ECM4P36156 370 aa3.94□□□□□ -1.78
SOF1YLL011W PRS4P38063 326 aaPredicted RBP3.94□□□□□ -1.78
SOF1YLL011W DHH1P39517 506 aaKnown RBP3.94□□□□□ -1.78
SOF1YLL011W ATP23P53722 227 aa3.94□□□□□ -1.78
SOF1YLL011W MRPL50P53724 139 aa3.94□□□□□ -1.78
SOF1YLL011W STP1Q00947 519 aa3.94□□□□□ -1.78
SOF1YLL011W SED5Q01590 340 aa3.94□□□□□ -1.78
SOF1YLL011W ADH6Q04894 360 aaKnown RBP3.94□□□□□ -1.78
SOF1YLL011W GAT3Q07928 141 aa3.94□□□□□ -1.78
SOF1YLL011W YAP7Q08182 245 aa3.94□□□□□ -1.78
SOF1YLL011W GET4Q12125 312 aa3.94□□□□□ -1.78
SOF1YLL011W DET1Q99288 334 aaKnown RBP3.94□□□□□ -1.78
SOF1YLL011W POM152P39685 1337 aa3.93□□□□□ -1.78
SOF1YLL011W AMD1P15274 810 aaKnown RBP3.93□□□□□ -1.78
SOF1YLL011W YPK2P18961 677 aa3.93□□□□□ -1.78
SOF1YLL011W APA2P22108 325 aa3.93□□□□□ -1.78
SOF1YLL011W SPO11P23179 398 aa3.93□□□□□ -1.78
SOF1YLL011W MBR1P23493 339 aa3.93□□□□□ -1.78
SOF1YLL011W RPS5P26783 225 aaKnown RBP3.93□□□□□ -1.78
SOF1YLL011W TIP1P27654 210 aaPredicted RBP3.93□□□□□ -1.78
SOF1YLL011W ACB1P31787 87 aa3.93□□□□□ -1.78
SOF1YLL011W MCR1P36060 302 aaKnown RBP3.93□□□□□ -1.78
SOF1YLL011W GEP4P38812 185 aa3.93□□□□□ -1.78
SOF1YLL011W PFS1P38872 237 aa3.93□□□□□ -1.78
SOF1YLL011W RBG1P39729 369 aa3.93□□□□□ -1.78
SOF1YLL011W PAC2P39937 518 aa3.93□□□□□ -1.78
SOF1YLL011W YPT11P48559 417 aa3.93□□□□□ -1.78
SOF1YLL011W ODC1Q03028 310 aa3.93□□□□□ -1.78
SOF1YLL011W CSM3Q04659 317 aa3.93□□□□□ -1.78
SOF1YLL011W TIM18Q08749 192 aa3.93□□□□□ -1.78
SOF1YLL011W APC9Q12107 265 aa3.93□□□□□ -1.78
SOF1YLL011W MSH5Q12175 901 aa3.93□□□□□ -1.78
SOF1YLL011W PGK1P00560 416 aaKnown RBP3.92□□□□□ -1.78
SOF1YLL011W MRP1P10662 321 aaKnown RBP3.92□□□□□ -1.78
SOF1YLL011W KSS1P14681 368 aa3.92□□□□□ -1.78
SOF1YLL011W ZRC1P20107 442 aa3.92□□□□□ -1.78
SOF1YLL011W MKK1P32490 508 aa3.92□□□□□ -1.78
SOF1YLL011W YEF1P32622 495 aa3.92□□□□□ -1.78
SOF1YLL011W GPX2P38143 162 aa3.92□□□□□ -1.78
SOF1YLL011W YCH1P42937 148 aa3.92□□□□□ -1.78
SOF1YLL011W KEG1P43614 200 aa3.92□□□□□ -1.78
SOF1YLL011W GWT1P47026 490 aa3.92□□□□□ -1.78
SOF1YLL011W HAM1P47119 197 aaKnown RBP3.92□□□□□ -1.78
SOF1YLL011W TDA7P53882 636 aaPredicted RBP3.92□□□□□ -1.78
SOF1YLL011W ESBP6P53918 673 aa3.92□□□□□ -1.78
SOF1YLL011W ARK1P53974 638 aa3.92□□□□□ -1.78
SOF1YLL011W OST6Q03723 332 aa3.92□□□□□ -1.78
SOF1YLL011W YDL009CQ12210 107 aa3.92□□□□□ -1.78
SOF1YLL011W TPT1Q12272 230 aaKnown RBP3.92□□□□□ -1.78
SOF1YLL011W MEX67Q99257 599 aaKnown RBP3.92□□□□□ -1.78
SOF1YLL011W PAB1P04147 577 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
SOF1YLL011W CAP2P13517 287 aa3.92□□□□□ -1.78
SOF1YLL011W EXG1P23776 448 aaKnown RBP3.92□□□□□ -1.78
SOF1YLL011W RBK1P25332 333 aa3.92□□□□□ -1.78
SOF1YLL011W ZRT1P32804 376 aa3.92□□□□□ -1.78
SOF1YLL011W YHK8P38776 514 aa3.92□□□□□ -1.78
SOF1YLL011W SMF2P38778 549 aa3.92□□□□□ -1.78
SOF1YLL011W CHS7P38843 316 aa3.92□□□□□ -1.78
SOF1YLL011W YGL082WP53155 381 aa3.92□□□□□ -1.78
SOF1YLL011W ALG11P53954 548 aaKnown RBP3.92□□□□□ -1.78
SOF1YLL011W CCE1Q03702 353 aa3.92□□□□□ -1.78
SOF1YLL011W VPS74Q06385 345 aa3.92□□□□□ -1.78
SOF1YLL011W YIL177CP40434 1758 aa3.91□□□□□ -1.78
SOF1YLL011W YJL225CP40889 1758 aa3.91□□□□□ -1.78
SOF1YLL011W ATP6P00854 259 aa3.91□□□□□ -1.78
SOF1YLL011W CDC33P07260 213 aaKnown RBP3.91□□□□□ -1.78
SOF1YLL011W HEM15P16622 393 aa3.91□□□□□ -1.78
SOF1YLL011W RPL24BP24000 155 aaKnown RBP3.91□□□□□ -1.78
SOF1YLL011W PTP1P25044 335 aa3.91□□□□□ -1.78
SOF1YLL011W DCC1P25559 380 aa3.91□□□□□ -1.78
SOF1YLL011W ERG9P29704 444 aa3.91□□□□□ -1.78
SOF1YLL011W PPZ2P33329 710 aa3.91□□□□□ -1.78
SOF1YLL011W YJR030CP47101 745 aa3.91□□□□□ -1.78
SOF1YLL011W CAF40P53829 373 aa3.91□□□□□ -1.78
SOF1YLL011W YNL181WP53878 407 aa3.91□□□□□ -1.78
SOF1YLL011W IRC4Q03036 179 aa3.91□□□□□ -1.78
SOF1YLL011W YOR387CQ08910 206 aa3.91□□□□□ -1.78
SOF1YLL011W POM33Q12164 279 aa3.91□□□□□ -1.78
SOF1YLL011W YBL111CQ3E7Y5 667 aa3.91□□□□□ -1.78
SOF1YLL011W HPR1P17629 752 aaKnown RBP3.9□□□□□ -1.79
SOF1YLL011W SAM2P19358 384 aaKnown RBP3.9□□□□□ -1.79
SOF1YLL011W ITR2P30606 609 aa3.9□□□□□ -1.79
SOF1YLL011W ELM1P32801 640 aa3.9□□□□□ -1.79
SOF1YLL011W TIR2P33890 251 aa3.9□□□□□ -1.79
SOF1YLL011W MOH1P38191 138 aa3.9□□□□□ -1.79
SOF1YLL011W YPT35P38815 214 aaKnown RBP3.9□□□□□ -1.79
SOF1YLL011W RFC4P40339 323 aaKnown RBP3.9□□□□□ -1.79
SOF1YLL011W QRI1P43123 477 aaKnown RBP3.9□□□□□ -1.79
SOF1YLL011W RTT101P47050 842 aa3.9□□□□□ -1.79
SOF1YLL011W HSH155P49955 971 aaKnown RBP3.9□□□□□ -1.79
SOF1YLL011W AVT4P50944 713 aa3.9□□□□□ -1.79
SOF1YLL011W POP6P53218 158 aa3.9□□□□□ -1.79
SOF1YLL011W TRM112P53738 135 aaPredicted RBP3.9□□□□□ -1.79
SOF1YLL011W CUS2P53830 285 aaPredicted RBP3.9□□□□□ -1.79
SOF1YLL011W ASR1Q06834 288 aa3.9□□□□□ -1.79
SOF1YLL011W ALE1Q08548 619 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms