RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W HRD3Q05787 833 aa2.11□□□□□ -2.07
NUP100YKL068W ACK1Q07622 623 aaPredicted RBP2.11□□□□□ -2.07
NUP100YKL068W ENB1Q08299 606 aa2.11□□□□□ -2.07
NUP100YKL068W SET6Q12529 373 aa2.11□□□□□ -2.07
NUP100YKL068W TRP4P07285 380 aaPredicted RBP2.1□□□□□ -2.07
NUP100YKL068W SNF3P10870 884 aa2.1□□□□□ -2.07
NUP100YKL068W TYR1P20049 452 aa2.1□□□□□ -2.07
NUP100YKL068W MRPL9P31334 269 aa2.1□□□□□ -2.07
NUP100YKL068W VMA5P31412 392 aaKnown RBP2.1□□□□□ -2.07
NUP100YKL068W APE2P32454 952 aaKnown RBP2.1□□□□□ -2.07
NUP100YKL068W DTR1P38125 572 aa2.1□□□□□ -2.07
NUP100YKL068W ROT2P38138 954 aa2.1□□□□□ -2.07
NUP100YKL068W PHM8P40025 321 aa2.1□□□□□ -2.07
NUP100YKL068W LCP5P40079 357 aaPredicted RBP2.1□□□□□ -2.07
NUP100YKL068W YKE4P40544 346 aa2.1□□□□□ -2.07
NUP100YKL068W GAB1P41733 394 aa2.1□□□□□ -2.07
NUP100YKL068W PMT6P42934 759 aa2.1□□□□□ -2.07
NUP100YKL068W PKP2P53170 491 aa2.1□□□□□ -2.07
NUP100YKL068W SMM1P53720 384 aaKnown RBP2.1□□□□□ -2.07
NUP100YKL068W ATG4P53867 494 aa2.1□□□□□ -2.07
NUP100YKL068W ALG11P53954 548 aaKnown RBP2.1□□□□□ -2.07
NUP100YKL068W SUR7P54003 302 aa2.1□□□□□ -2.07
NUP100YKL068W YPL080CQ02826 108 aa2.1□□□□□ -2.07
NUP100YKL068W RVB1Q03940 463 aaKnown RBP2.1□□□□□ -2.07
NUP100YKL068W ECM11Q04110 302 aa2.1□□□□□ -2.07
NUP100YKL068W DLT1Q04216 342 aa2.1□□□□□ -2.07
NUP100YKL068W YLR224WQ05947 369 aa2.1□□□□□ -2.07
NUP100YKL068W LDS2Q08218 356 aa2.1□□□□□ -2.07
NUP100YKL068W AHA1Q12449 350 aaKnown RBP2.1□□□□□ -2.07
NUP100YKL068W YOR338WQ99326 363 aa2.1□□□□□ -2.07
NUP100YKL068W MEC1P38111 2368 aa2.1□□□□□ -2.07
NUP100YKL068W RAD1P06777 1100 aa2.1□□□□□ -2.07
NUP100YKL068W IDH1P28834 360 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
NUP100YKL068W MRPS5P33759 307 aa2.1□□□□□ -2.07
NUP100YKL068W CHK1P38147 527 aa2.1□□□□□ -2.07
NUP100YKL068W ATG7P38862 630 aa2.1□□□□□ -2.07
NUP100YKL068W YER121WP40076 114 aa2.1□□□□□ -2.07
NUP100YKL068W AGP3P43548 558 aa2.1□□□□□ -2.07
NUP100YKL068W PYK2P52489 506 aaKnown RBP2.1□□□□□ -2.07
NUP100YKL068W VEL1P53058 206 aa2.1□□□□□ -2.07
NUP100YKL068W YIP3P53633 176 aa2.1□□□□□ -2.07
NUP100YKL068W SNO2P53823 222 aa2.1□□□□□ -2.07
NUP100YKL068W SNU56Q03782 492 aaKnown RBP2.1□□□□□ -2.07
NUP100YKL068W GFD1Q04839 188 aaKnown RBP2.1□□□□□ -2.07
NUP100YKL068W SPC2Q04969 178 aa2.1□□□□□ -2.07
NUP100YKL068W NNT1Q05874 261 aa2.1□□□□□ -2.07
NUP100YKL068W YLL056CQ12177 298 aa2.1□□□□□ -2.07
NUP100YKL068W RUP1Q12242 671 aa2.1□□□□□ -2.07
NUP100YKL068W YBR121C-AP0C5L4 52 aa2.09□□□□□ -2.07
NUP100YKL068W RPB8P20436 146 aa2.09□□□□□ -2.07
NUP100YKL068W NUP1P20676 1076 aa2.09□□□□□ -2.07
NUP100YKL068W SPO23P33757 523 aa2.09□□□□□ -2.07
NUP100YKL068W VPS51P36116 164 aa2.09□□□□□ -2.07
NUP100YKL068W AME1P38313 324 aa2.09□□□□□ -2.07
NUP100YKL068W CBR1P38626 284 aaKnown RBP2.09□□□□□ -2.07
NUP100YKL068W ICE2P40499 491 aa2.09□□□□□ -2.07
NUP100YKL068W TAF6P53040 516 aa2.09□□□□□ -2.07
NUP100YKL068W RRN9P53437 365 aa2.09□□□□□ -2.07
NUP100YKL068W SED5Q01590 340 aa2.09□□□□□ -2.07
NUP100YKL068W CAC2Q04199 468 aa2.09□□□□□ -2.07
NUP100YKL068W BER1Q06688 274 aaKnown RBP2.09□□□□□ -2.07
NUP100YKL068W MED7Q08278 222 aa2.09□□□□□ -2.07
NUP100YKL068W YLR049CQ12110 428 aa2.09□□□□□ -2.07
NUP100YKL068W RKM5Q12367 367 aa2.09□□□□□ -2.07
NUP100YKL068W SEC3P33332 1336 aaKnown RBP2.09□□□□□ -2.07
NUP100YKL068W QCR7P00128 127 aa2.09□□□□□ -2.08
NUP100YKL068W YCR006CP25350 157 aa2.09□□□□□ -2.08
NUP100YKL068W DEP1P31385 405 aa2.09□□□□□ -2.08
NUP100YKL068W PPZ2P33329 710 aa2.09□□□□□ -2.08
NUP100YKL068W SWD2P36104 329 aaPredicted RBP2.09□□□□□ -2.08
NUP100YKL068W CBP4P37267 147 aa2.09□□□□□ -2.08
NUP100YKL068W URA8P38627 578 aaPredicted RBP2.09□□□□□ -2.08
NUP100YKL068W FHL1P39521 936 aa2.09□□□□□ -2.08
NUP100YKL068W RPH1P39956 796 aa2.09□□□□□ -2.08
NUP100YKL068W YMR134WP40207 237 aa2.09□□□□□ -2.08
NUP100YKL068W YIL060WP40519 144 aa2.09□□□□□ -2.08
NUP100YKL068W AZR1P50080 613 aa2.09□□□□□ -2.08
NUP100YKL068W PCP1P53259 346 aa2.09□□□□□ -2.08
NUP100YKL068W EBS1Q03466 884 aaKnown RBP2.09□□□□□ -2.08
NUP100YKL068W ATG17Q06410 417 aa2.09□□□□□ -2.08
NUP100YKL068W ALE1Q08548 619 aa2.09□□□□□ -2.08
NUP100YKL068W POM33Q12164 279 aa2.09□□□□□ -2.08
NUP100YKL068W NCB2Q92317 146 aa2.09□□□□□ -2.08
NUP100YKL068W PGK1P00560 416 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W MRP2P10663 115 aaPredicted RBP2.08□□□□□ -2.08
NUP100YKL068W BAR1P12630 587 aa2.08□□□□□ -2.08
NUP100YKL068W RPO26P20435 155 aa2.08□□□□□ -2.08
NUP100YKL068W SAT4P25333 603 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W GIT1P25346 518 aa2.08□□□□□ -2.08
NUP100YKL068W MEI4P29467 408 aa2.08□□□□□ -2.08
NUP100YKL068W SAC1P32368 623 aaKnown RBP2.08□□□□□ -2.08
NUP100YKL068W RAD24P32641 659 aa2.08□□□□□ -2.08
NUP100YKL068W POP7P38291 140 aa2.08□□□□□ -2.08
NUP100YKL068W AGE2P40529 298 aa2.08□□□□□ -2.08
NUP100YKL068W COX16P47081 118 aa2.08□□□□□ -2.08
NUP100YKL068W GET1P53192 235 aa2.08□□□□□ -2.08
NUP100YKL068W PXR1P53335 271 aaPredicted RBP2.08□□□□□ -2.08
NUP100YKL068W TMS1Q12116 473 aa2.08□□□□□ -2.08
NUP100YKL068W PER33Q12144 273 aa2.08□□□□□ -2.08
NUP100YKL068W HIS1P00498 297 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms