RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W YPL080CQ02826 108 aa1.63□□□□□ -2.15
RPF1YHR088W YFH1Q07540 174 aa1.63□□□□□ -2.15
RPF1YHR088W DBR1P24309 405 aaKnown RBP1.62□□□□□ -2.15
RPF1YHR088W PCH2P38126 564 aa1.62□□□□□ -2.15
RPF1YHR088W YNL320WP42840 284 aa1.62□□□□□ -2.15
RPF1YHR088W YFR045WP43617 309 aa1.62□□□□□ -2.15
RPF1YHR088W HIT1P46973 164 aa1.62□□□□□ -2.15
RPF1YHR088W LSG1P53145 640 aaKnown RBP1.62□□□□□ -2.15
RPF1YHR088W SMC6Q12749 1114 aa1.62□□□□□ -2.15
RPF1YHR088W RPB9P27999 122 aa1.61□□□□□ -2.15
RPF1YHR088W CTM1P38818 585 aa1.61□□□□□ -2.15
RPF1YHR088W INP1Q03694 420 aa1.61□□□□□ -2.15
RPF1YHR088W GYL1Q04322 720 aa1.61□□□□□ -2.15
RPF1YHR088W YDR222WQ04925 415 aa1.61□□□□□ -2.15
RPF1YHR088W PLB3Q08108 686 aa1.61□□□□□ -2.15
RPF1YHR088W PEX27Q08580 376 aa1.61□□□□□ -2.15
RPF1YHR088W RPS16AP0CX51 143 aaKnown RBP1.6□□□□□ -2.15
RPF1YHR088W RPS16BP0CX52 143 aaKnown RBP1.6□□□□□ -2.15
RPF1YHR088W GRR1P24814 1151 aa1.6□□□□□ -2.15
RPF1YHR088W ARO4P32449 370 aaKnown RBP1.6□□□□□ -2.15
RPF1YHR088W PXA2P34230 853 aa1.6□□□□□ -2.15
RPF1YHR088W ZRT3P34240 503 aa1.6□□□□□ -2.15
RPF1YHR088W YJL055WP47044 245 aa1.6□□□□□ -2.15
RPF1YHR088W MLC1P53141 149 aa1.6□□□□□ -2.15
RPF1YHR088W MPS2P53159 387 aa1.6□□□□□ -2.15
RPF1YHR088W CAX4P53223 239 aa1.6□□□□□ -2.15
RPF1YHR088W YOL075CQ08234 1294 aa1.6□□□□□ -2.15
RPF1YHR088W FSH3Q99369 266 aa1.6□□□□□ -2.15
RPF1YHR088W KRE1P17260 313 aa1.59□□□□□ -2.15
RPF1YHR088W YKL187CP34231 750 aa1.59□□□□□ -2.15
RPF1YHR088W GDT1P38301 280 aaPredicted RBP1.59□□□□□ -2.15
RPF1YHR088W PCL7P40186 285 aa1.59□□□□□ -2.15
RPF1YHR088W EFM4P40516 257 aa1.59□□□□□ -2.15
RPF1YHR088W CSM3Q04659 317 aa1.59□□□□□ -2.15
RPF1YHR088W SPH1Q06160 661 aa1.59□□□□□ -2.15
RPF1YHR088W DXO1Q06349 442 aa1.59□□□□□ -2.15
RPF1YHR088W TAF10Q12030 206 aa1.59□□□□□ -2.15
RPF1YHR088W YOR283WQ12040 230 aaKnown RBP1.59□□□□□ -2.15
RPF1YHR088W MRX4Q12467 430 aa1.59□□□□□ -2.15
RPF1YHR088W AIM45Q12480 344 aaKnown RBP1.59□□□□□ -2.15
RPF1YHR088W ERG9P29704 444 aa1.58□□□□□ -2.16
RPF1YHR088W VMA8P32610 256 aaKnown RBP1.58□□□□□ -2.16
RPF1YHR088W CSE1P33307 960 aa1.58□□□□□ -2.16
RPF1YHR088W RFT1P38206 574 aaPredicted RBP1.58□□□□□ -2.16
RPF1YHR088W SMF2P38778 549 aa1.58□□□□□ -2.16
RPF1YHR088W ATG7P38862 630 aa1.58□□□□□ -2.16
RPF1YHR088W YCH1P42937 148 aa1.58□□□□□ -2.16
RPF1YHR088W ECO1P43605 281 aa1.58□□□□□ -2.16
RPF1YHR088W AIM33Q04516 312 aa1.58□□□□□ -2.16
RPF1YHR088W ARF2P19146 181 aaKnown RBP1.57□□□□□ -2.16
RPF1YHR088W MRPS5P33759 307 aa1.57□□□□□ -2.16
RPF1YHR088W SNL1P40548 159 aa1.57□□□□□ -2.16
RPF1YHR088W EPL1P43572 832 aa1.57□□□□□ -2.16
RPF1YHR088W YMR244WQ04018 355 aa1.57□□□□□ -2.16
RPF1YHR088W IES3Q12345 250 aa1.57□□□□□ -2.16
RPF1YHR088W RPN6Q12377 434 aa1.57□□□□□ -2.16
RPF1YHR088W TRM10Q12400 293 aa1.57□□□□□ -2.16
RPF1YHR088W DAP2P18962 818 aa1.56□□□□□ -2.16
RPF1YHR088W ASP1P38986 381 aaPredicted RBP1.56□□□□□ -2.16
RPF1YHR088W SLM1P40485 686 aa1.56□□□□□ -2.16
RPF1YHR088W BAT2P47176 376 aaKnown RBP1.56□□□□□ -2.16
RPF1YHR088W YGL118CP53132 145 aa1.56□□□□□ -2.16
RPF1YHR088W SDS23P53172 527 aa1.56□□□□□ -2.16
RPF1YHR088W YNL095CP53932 642 aa1.56□□□□□ -2.16
RPF1YHR088W SXM1Q04175 944 aaKnown RBP1.56□□□□□ -2.16
RPF1YHR088W FEX1Q08913 375 aa1.56□□□□□ -2.16
RPF1YHR088W FEX2Q08991 375 aa1.56□□□□□ -2.16
RPF1YHR088W CKI1P20485 582 aa1.55□□□□□ -2.16
RPF1YHR088W MDL1P33310 695 aa1.55□□□□□ -2.16
RPF1YHR088W PEX32P38292 413 aa1.55□□□□□ -2.16
RPF1YHR088W FMP48P53233 369 aa1.55□□□□□ -2.16
RPF1YHR088W SMP3Q04174 516 aa1.55□□□□□ -2.16
RPF1YHR088W TFB5Q3E7C1 72 aaPredicted RBP1.55□□□□□ -2.16
RPF1YHR088W RPL6BP05739 176 aaKnown RBP1.54□□□□□ -2.16
RPF1YHR088W THR4P16120 514 aaKnown RBP1.54□□□□□ -2.16
RPF1YHR088W PUP2P32379 260 aa1.54□□□□□ -2.16
RPF1YHR088W LRP1P38801 184 aaKnown RBP1.54□□□□□ -2.16
RPF1YHR088W YHR122WP38829 231 aa1.54□□□□□ -2.16
RPF1YHR088W YMR134WP40207 237 aa1.54□□□□□ -2.16
RPF1YHR088W TPC1P53257 314 aa1.54□□□□□ -2.16
RPF1YHR088W RPL6AQ02326 176 aaKnown RBP1.54□□□□□ -2.16
RPF1YHR088W APC5Q08683 685 aa1.54□□□□□ -2.16
RPF1YHR088W TFC7Q12415 435 aa1.54□□□□□ -2.16
RPF1YHR088W PAR32Q12515 295 aaKnown RBP1.54□□□□□ -2.16
RPF1YHR088W MHP1P43638 1398 aa1.54□□□□□ -2.16
RPF1YHR088W ADH3P07246 375 aaKnown RBP1.53□□□□□ -2.16
RPF1YHR088W FAA1P30624 700 aaKnown RBP1.53□□□□□ -2.16
RPF1YHR088W HMX1P32339 317 aa1.53□□□□□ -2.16
RPF1YHR088W BUD2P33314 1104 aa1.53□□□□□ -2.16
RPF1YHR088W YNL040WP53960 456 aaPredicted RBP1.53□□□□□ -2.16
RPF1YHR088W ACT1P60010 375 aaKnown RBP1.53□□□□□ -2.16
RPF1YHR088W NAT4Q04751 285 aa1.53□□□□□ -2.16
RPF1YHR088W PRM4Q12498 284 aa1.53□□□□□ -2.16
RPF1YHR088W MAS1P10507 462 aa1.52□□□□□ -2.17
RPF1YHR088W UTR1P21373 530 aa1.52□□□□□ -2.17
RPF1YHR088W DCC1P25559 380 aa1.52□□□□□ -2.17
RPF1YHR088W MXR2P25566 168 aa1.52□□□□□ -2.17
RPF1YHR088W GDI1P39958 451 aaKnown RBP1.52□□□□□ -2.17
RPF1YHR088W DSE1P40077 573 aa1.52□□□□□ -2.17
RPF1YHR088W PMT4P46971 762 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms